GLYMA20G30250 (Glycine max)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GLYMA20G30250 T271818_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK02532.1
M02347_2.00
Cannabis sativa
WAATATCTN

NAGATATTW
PBM
Weirauch et al.(2014)
pTH9579
0.909 1.000
RVE8
M01074_2.00
Arabidopsis thaliana
NNNRWATCNN

NNGATWYNNN
PBM
Sullivan et al.(2014)
pTH7136
0.901 0.957
RVE8
M07069_2.00
Arabidopsis thaliana
NHNWAAATATCT

AGATATTTWNDN
Dap-seq
OMalley et al.(2016)
At3g09600_col_a
0.901 0.957
RVE8
M07070_2.00
Arabidopsis thaliana
NNWAAATATCT

AGATATTTWNN
Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a
0.901 0.957
RVE4
M07117_2.00
Arabidopsis thaliana
NNWAAATATCT

AGATATTTWNN
Dap-seq
OMalley et al.(2016)
LCL1_colamp_a
0.901 0.957
RVE4
M07118_2.00
Arabidopsis thaliana
NAAAATATCT

AGATATTTTN
Dap-seq
OMalley et al.(2016)
LCL1_col
0.901 0.957
RVE6
M01081_2.00
Arabidopsis thaliana
AATATCTD

HAGATATT
PBM
Sullivan et al.(2014)
pTH7151
0.899 0.978
RVE6
M07138_2.00
Arabidopsis thaliana
NNAAAATATCT

AGATATTTTNN
Dap-seq
OMalley et al.(2016)
At5g52660_col_a
0.899 0.978
RVE6
M07139_2.00
Arabidopsis thaliana
NNNWAAATATCT

AGATATTTWNNN
Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a
0.899 0.978
mybG
M02319_2.00
Dictyostelium discoideum
WAATATCT

AGATATTW
PBM
Weirauch et al.(2014)
pTH5362
0.818 0.870
RVE5
M01079_2.00
Arabidopsis thaliana
NWAATATCHN

NDGATATTWN
PBM
Sullivan et al.(2014)
pTH7138
0.803 0.891
RVE5
M07100_2.00
Arabidopsis thaliana
NNAAAATATCT

AGATATTTTNN
Dap-seq
OMalley et al.(2016)
At4g01280_col_a
0.803 0.891
RVE5
M07101_2.00
Arabidopsis thaliana
NNWAAATATCT

AGATATTTWNN
Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a
0.803 0.891
PK08316.1
M02350_2.00
Cannabis sativa
NNNRWATCNN

NNGATWYNNN
PBM
Weirauch et al.(2014)
pTH9488
0.706 0.696
RVE1
M00879_2.00
Arabidopsis thaliana
AAATATCT

AGATATTT
PBM
Franco-Zorrilla et al.(2014)
RVE1
0.670 0.652
RVE1
M07128_2.00
Arabidopsis thaliana
NNNWAAATATCTNN

NNAGATATTTWNNN
Dap-seq
OMalley et al.(2016)
RVE1_col_a
0.670 0.652
RVE1
M07129_2.00
Arabidopsis thaliana
NNWAATATCW

WGATATTWNN
Dap-seq
OMalley et al.(2016)
RVE1_colamp_a
0.670 0.652
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA20G30250.1 Myb 55 100
GLYMA20G30250.2 Myb 55 100

Links

Other Myb/SANT family TFs
Other Glycine max TFs

335 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_07803 Aegilops tauschii F775_07803 I
F775_14728 Aegilops tauschii F775_14728 I
AMTR_s00048p00108400 Amborella trichopoda AMTR_s00048p00108400 I
AMTR_s00059p00094730 Amborella trichopoda AMTR_s00059p00094730 I
AMTR_s00138p00062920 Amborella trichopoda AMTR_s00138p00062920 I
AMTR_s00158p00056990 Amborella trichopoda AMTR_s00158p00056990 I
Aquca_013_00209 Aquilegia coerulea Aquca_013_00209 I
Aquca_037_00034 Aquilegia coerulea Aquca_037_00034 I
GBF3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4002338 I
bZIP68 Arabidopsis lyrata fgenesh2_kg.1__3350__AT1G32150.1 I
GBF1 Arabidopsis lyrata scaffold_700433.1 I
BZIP68 Arabidopsis thaliana AT1G32150 D
BZIP16 Arabidopsis thaliana AT2G35530 D
GBF3 Arabidopsis thaliana AT2G46270 D
GBF2 Arabidopsis thaliana AT4G01120 D
GBF1 Arabidopsis thaliana AT4G36730 D
Bostr.23794s0549 Boechera stricta Bostr.23794s0549 I
Bostr.3359s0141 Boechera stricta Bostr.3359s0141 I
Bostr.7867s1529 Boechera stricta Bostr.7867s1529 I
BRADI1G04510 Brachypodium distachyon BRADI1G04510 I
BRADI1G54180 Brachypodium distachyon BRADI1G54180 I
BRADI2G15940 Brachypodium distachyon BRADI2G15940 I
BRADI2G45567 Brachypodium distachyon BRADI2G45567 I
Bo1g005460 Brassica oleracea Bo1g005460 I
Bo4g010410 Brassica oleracea Bo4g010410 I
Bo4g038560 Brassica oleracea Bo4g038560 I
Bra004550 Brassica rapa Bra004550 I
Bra005335 Brassica rapa Bra005335 I
Bra010572 Brassica rapa Bra010572 I
Bra011701 Brassica rapa Bra011701 I
PK09653.1 Cannabis sativa PK09653.1 D
PK23964.1 Cannabis sativa PK23964.1 D
Cagra.0050s0071 Capsella grandiflora Cagra.0050s0071 I
Cagra.0993s0063 Capsella grandiflora Cagra.0993s0063 I
Cagra.3359s0011 Capsella grandiflora Cagra.3359s0011 I
Cagra.5996s0003 Capsella grandiflora Cagra.5996s0003 I
Carubv10005287m.g Capsella rubella Carubv10005287m.g I
Carubv10023434m.g Capsella rubella Carubv10023434m.g I
evm.TU.supercontig_158.7 Carica papaya evm.TU.supercontig_158.7 I
evm.TU.supercontig_2741.1 Carica papaya evm.TU.supercontig_2741.1 I
Ca_01293 Cicer arietinum Ca_01293 I
Ca_11455 Cicer arietinum Ca_11455 I
Ca_15839 Cicer arietinum Ca_15839 I
Ca_17787 Cicer arietinum Ca_17787 I
Cla008988 Citrullus lanatus Cla008988 I
Cla014415 Citrullus lanatus Cla014415 I
Cla016502 Citrullus lanatus Cla016502 I
Cla021500 Citrullus lanatus Cla021500 I
Ciclev10001333m.g Citrus clementina Ciclev10001333m.g I
Ciclev10020314m.g Citrus clementina Ciclev10020314m.g I
Ciclev10025963m.g Citrus clementina Ciclev10025963m.g I
orange1.1g014660m.g Citrus sinensis orange1.1g014660m.g I
orange1.1g018605m.g Citrus sinensis orange1.1g018605m.g I
orange1.1g036551m.g Citrus sinensis orange1.1g036551m.g I
Cucsa.104970 Cucumis sativus Cucsa.104970 I
Cucsa.258940 Cucumis sativus Cucsa.258940 I
Cucsa.312800 Cucumis sativus Cucsa.312800 I
Cucsa.322110 Cucumis sativus Cucsa.322110 I
Eucgr.E00078 Eucalyptus grandis Eucgr.E00078 I
Eucgr.E00223 Eucalyptus grandis Eucgr.E00223 I
Eucgr.H01256 Eucalyptus grandis Eucgr.H01256 I
Thhalv10001533m.g Eutrema salsugineum Thhalv10001533m.g I
Thhalv10007879m.g Eutrema salsugineum Thhalv10007879m.g I
Thhalv10016740m.g Eutrema salsugineum Thhalv10016740m.g I
Thhalv10025733m.g Eutrema salsugineum Thhalv10025733m.g I
gene13716-v1.0-hybrid Fragaria vesca gene13716-v1.0-hybrid I
gene29546-v1.0-hybrid Fragaria vesca gene29546-v1.0-hybrid I
GLYMA01G01740 Glycine max GLYMA01G01740 I
GLYMA01G38381 Glycine max GLYMA01G38381 I
GLYMA02G06550 Glycine max GLYMA02G06550 I
GLYMA07G06620 Glycine max GLYMA07G06620 I
GLYMA08G34280 Glycine max GLYMA08G34280 I
GLYMA09G34170 Glycine max GLYMA09G34170 I
GLYMA16G03190 Glycine max GLYMA16G03190 I
GLYMA16G15810 Glycine max GLYMA16G15810 I
GLYMA16G25600 Glycine max GLYMA16G25600 I
Gorai.003G185700 Gossypium raimondii Gorai.003G185700 I
Gorai.004G153100 Gossypium raimondii Gorai.004G153100 I
Gorai.004G181900 Gossypium raimondii Gorai.004G181900 I
Gorai.007G105100 Gossypium raimondii Gorai.007G105100 I
Gorai.007G205700 Gossypium raimondii Gorai.007G205700 I
Gorai.008G068900 Gossypium raimondii Gorai.008G068900 I
Gorai.008G123200 Gossypium raimondii Gorai.008G123200 I
MLOC_6711 Hordeum vulgare MLOC_6711 I
MLOC_79342 Hordeum vulgare MLOC_79342 I
LPERR01G21580 Leersia perrieri LPERR01G21580 I
LPERR03G32540 Leersia perrieri LPERR03G32540 I
LPERR05G21930 Leersia perrieri LPERR05G21930 I
LPERR07G06120 Leersia perrieri LPERR07G06120 I
LPERR12G05920 Leersia perrieri LPERR12G05920 I
Lus10003034.g Linum usitatissimum Lus10003034.g I
Lus10005146.g Linum usitatissimum Lus10005146.g I
Lus10014324.g Linum usitatissimum Lus10014324.g I
Lus10026033.g Linum usitatissimum Lus10026033.g I
chr1.CM0579.280.nd Lotus japonicus chr1.CM0579.280.nd I
chr2.LjT41P23.50.nc Lotus japonicus chr2.LjT41P23.50.nc I
LjSGA_036158.1 Lotus japonicus LjSGA_036158.1 I
MDP0000138052 Malus domestica MDP0000138052 I
MDP0000185553 Malus domestica MDP0000185553 I
MDP0000231274 Malus domestica MDP0000231274 I
MDP0000286846 Malus domestica MDP0000286846 I
MDP0000493795 Malus domestica MDP0000493795 I
MDP0000545420 Malus domestica MDP0000545420 I
cassava11837.valid.m1 Manihot esculenta cassava11837.valid.m1 I
cassava29861.valid.m1 Manihot esculenta cassava29861.valid.m1 I
cassava29862.valid.m1 Manihot esculenta cassava29862.valid.m1 I
cassava37043.valid.m1 Manihot esculenta cassava37043.valid.m1 I
cassava43569.valid.m1 Manihot esculenta cassava43569.valid.m1 I
cassava43570.valid.m1 Manihot esculenta cassava43570.valid.m1 I
cassava43571.valid.m1 Manihot esculenta cassava43571.valid.m1 I
cassava45491.m1 Manihot esculenta cassava45491.m1 I
cassava46468.m1 Manihot esculenta cassava46468.m1 I
MTR_5g028850 Medicago truncatula MTR_5g028850 I
MTR_7g116890 Medicago truncatula MTR_7g116890 I
MTR_8g070820 Medicago truncatula MTR_8g070820 I
MTR_8g077950 Medicago truncatula MTR_8g077950 I
estExt_fgenesh1_pg.C_10522 Micromonas pusilla estExt_fgenesh1_pg.C_10522 I
gw1.8.536.1 Micromonas pusilla gw1.8.536.1 I
estExt_fgenesh2_pg.C_Chr_020452 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_020452 I
gw2.11.550.1 Micromonas sp RCC299 gw2.11.550.1 I
mgf000639m Mimulus guttatus mgf000639m I
mgf003302m Mimulus guttatus mgf003302m I
mgf005151m Mimulus guttatus mgf005151m I
mgf008195m Mimulus guttatus mgf008195m I
mgf008605m Mimulus guttatus mgf008605m I
mgf013375m Mimulus guttatus mgf013375m I
mgf013423m Mimulus guttatus mgf013423m I
mgf014804m Mimulus guttatus mgf014804m I
GSMUA_Achr4G33130_001 Musa acuminata GSMUA_Achr4G33130_001 I
GSMUA_Achr6G00170_001 Musa acuminata GSMUA_Achr6G00170_001 I
TAF1_TOBAC Nicotiana tabacum TAF1_TOBAC D
OBART01G25300 Oryza barthii OBART01G25300 I
OBART05G26280 Oryza barthii OBART05G26280 I
OBART07G07070 Oryza barthii OBART07G07070 I
OBART12G06770 Oryza barthii OBART12G06770 I
OB01G34490 Oryza brachyantha OB01G34490 I
OB05G33790 Oryza brachyantha OB05G33790 I
OB07G15280 Oryza brachyantha OB07G15280 I
OB12G16310 Oryza brachyantha OB12G16310 I
ORGLA01G0206000 Oryza glaberrima ORGLA01G0206000 I
ORGLA05G0227800 Oryza glaberrima ORGLA05G0227800 I
ORGLA12G0063500 Oryza glaberrima ORGLA12G0063500 I
OGLUM01G29060 Oryza glumaepatula OGLUM01G29060 I
OGLUM05G27920 Oryza glumaepatula OGLUM05G27920 I
OGLUM07G06770 Oryza glumaepatula OGLUM07G06770 I
OGLUM12G08090 Oryza glumaepatula OGLUM12G08090 I
BGIOSGA001085 Oryza indica BGIOSGA001085 I
BGIOSGA013793 Oryza indica BGIOSGA013793 I
BGIOSGA020389 Oryza indica BGIOSGA020389 I
BGIOSGA025382 Oryza indica BGIOSGA025382 I
BGIOSGA036419 Oryza indica BGIOSGA036419 I
OLONG_003667 Oryza longistaminata OLONG_003667 I
OLONG_021599 Oryza longistaminata OLONG_021599 I
OLONG_021967 Oryza longistaminata OLONG_021967 I
OLONG_022047 Oryza longistaminata OLONG_022047 I
OMERI01G23000 Oryza meridionalis OMERI01G23000 I
OMERI03G30340 Oryza meridionalis OMERI03G30340 I
OMERI06G11100 Oryza meridionalis OMERI06G11100 I
OMERI07G05820 Oryza meridionalis OMERI07G05820 I
OMERI12G04560 Oryza meridionalis OMERI12G04560 I
ONIVA01G28540 Oryza nivara ONIVA01G28540 I
ONIVA05G28290 Oryza nivara ONIVA05G28290 I
ONIVA07G05320 Oryza nivara ONIVA07G05320 I
ONIVA12G06500 Oryza nivara ONIVA12G06500 I
OPUNC01G25140 Oryza punctata OPUNC01G25140 I
OPUNC02G01690 Oryza punctata OPUNC02G01690 I
OPUNC05G23850 Oryza punctata OPUNC05G23850 I
OPUNC12G06450 Oryza punctata OPUNC12G06450 I
ORUFI01G28110 Oryza rufipogon ORUFI01G28110 I
ORUFI05G28170 Oryza rufipogon ORUFI05G28170 I
ORUFI07G07050 Oryza rufipogon ORUFI07G07050 I
ORUFI12G07600 Oryza rufipogon ORUFI12G07600 I
OS01G0658900 Oryza sativa OS01G0658900 I
OS05G0569300 Oryza sativa OS05G0569300 I
OS07G0209800 Oryza sativa OS07G0209800 I
Q40645_ORYSA Oryza sativa Q40645_ORYSA D
Pavir.Aa03436 Panicum virgatum Pavir.Aa03436 I
Pavir.Ab00132 Panicum virgatum Pavir.Ab00132 I
Pavir.Ba03287 Panicum virgatum Pavir.Ba03287 I
Pavir.Bb00931 Panicum virgatum Pavir.Bb00931 I
Pavir.Ca00403 Panicum virgatum Pavir.Ca00403 I
Pavir.Ca00968 Panicum virgatum Pavir.Ca00968 I
Pavir.Cb01814 Panicum virgatum Pavir.Cb01814 I
Pavir.Ea02315 Panicum virgatum Pavir.Ea02315 I
Pavir.J02462 Panicum virgatum Pavir.J02462 I
Pavir.J09275 Panicum virgatum Pavir.J09275 I
CPRF1_PETCR Petroselinum crispum CPRF1_PETCR D
Q41109_PHAVU Phaseolus vulgaris Q41109_PHAVU D
PDK_20s1310372g001 Phoenix dactylifera PDK_20s1310372g001 I
PDK_20s1349941g001 Phoenix dactylifera PDK_20s1349941g001 I
PDK_20s1368181g001 Phoenix dactylifera PDK_20s1368181g001 I
PDK_20s1372692g002 Phoenix dactylifera PDK_20s1372692g002 I
PDK_20s1568831g001 Phoenix dactylifera PDK_20s1568831g001 I
gw1.27.125.1 Physcomitrella patens gw1.27.125.1 I
gw1.3.298.1 Physcomitrella patens gw1.3.298.1 I
gw1.33.173.1 Physcomitrella patens gw1.33.173.1 I
POPTR_0001s01840 Populus trichocarpa POPTR_0001s01840 I
POPTR_0002s16870 Populus trichocarpa POPTR_0002s16870 I
POPTR_0003s09630 Populus trichocarpa POPTR_0003s09630 I
POPTR_0005s12750 Populus trichocarpa POPTR_0005s12750 I
POPTR_0007s12460 Populus trichocarpa POPTR_0007s12460 I
POPTR_0014s08990 Populus trichocarpa POPTR_0014s08990 I
Pm018422 Prunus mume Pm018422 I
Pm023132 Prunus mume Pm023132 I
Pm026586 Prunus mume Pm026586 I
PRUPE_ppa006173mg Prunus persica PRUPE_ppa006173mg I
PRUPE_ppa006484mg Prunus persica PRUPE_ppa006484mg I
PRUPE_ppa008024mg Prunus persica PRUPE_ppa008024mg I
29646.m001068 Ricinus communis 29646.m001068 I
30068.m002661 Ricinus communis 30068.m002661 I
30174.m008698 Ricinus communis 30174.m008698 I
SapurV1A.0013s0770 Salix purpurea SapurV1A.0013s0770 I
SapurV1A.0051s0250 Salix purpurea SapurV1A.0051s0250 I
SapurV1A.0063s0130 Salix purpurea SapurV1A.0063s0130 I
SapurV1A.0255s0070 Salix purpurea SapurV1A.0255s0070 I
SapurV1A.0817s0110 Salix purpurea SapurV1A.0817s0110 I
SELMODRAFT_125734 Selaginella moellendorffii SELMODRAFT_125734 I
SELMODRAFT_129391 Selaginella moellendorffii SELMODRAFT_129391 I
SELMODRAFT_135978 Selaginella moellendorffii SELMODRAFT_135978 I
SELMODRAFT_38592 Selaginella moellendorffii SELMODRAFT_38592 I
SELMODRAFT_38594 Selaginella moellendorffii SELMODRAFT_38594 I
Si001929m.g Setaria italica Si001929m.g I
Si017637m.g Setaria italica Si017637m.g I
Si022325m.g Setaria italica Si022325m.g I
Si022388m.g Setaria italica Si022388m.g I
Si030123m.g Setaria italica Si030123m.g I
Si039367m.g Setaria italica Si039367m.g I
Solyc01g095460.2 Solanum lycopersicum Solyc01g095460.2 I
Solyc02g062950.2 Solanum lycopersicum Solyc02g062950.2 I
Solyc02g085610.2 Solanum lycopersicum Solyc02g085610.2 I
Solyc05g050220.2 Solanum lycopersicum Solyc05g050220.2 I
Solyc08g005290.2 Solanum lycopersicum Solyc08g005290.2 I
Solyc08g076100.2 Solanum lycopersicum Solyc08g076100.2 I
PGSC0003DMG400000088 Solanum tuberosum PGSC0003DMG400000088 I
PGSC0003DMG400012660 Solanum tuberosum PGSC0003DMG400012660 I
PGSC0003DMG400018469 Solanum tuberosum PGSC0003DMG400018469 I
PGSC0003DMG400033876 Solanum tuberosum PGSC0003DMG400033876 I
Sb01g004080 Sorghum bicolor Sb01g004080 I
Sb02g006350 Sorghum bicolor Sb02g006350 I
Sb03g030050 Sorghum bicolor Sb03g030050 I
Sb04g002360 Sorghum bicolor Sb04g002360 I
Sb08g008300 Sorghum bicolor Sb08g008300 I
Sb09g028990 Sorghum bicolor Sb09g028990 I
TCM_000436 Theobroma cacao TCM_000436 I
TCM_005210 Theobroma cacao TCM_005210 I
TCM_016606 Theobroma cacao TCM_016606 I
EMBP1_WHEAT Triticum aestivum EMBP1_WHEAT D
Traes_1AL_F18EC96DF Triticum aestivum Traes_1AL_F18EC96DF I
Traes_1BL_C5FEAF06E Triticum aestivum Traes_1BL_C5FEAF06E I
Traes_1DL_23D036A85 Triticum aestivum Traes_1DL_23D036A85 I
Traes_2BL_245DDBC7B Triticum aestivum Traes_2BL_245DDBC7B I
EmBP-1 Triticum aestivum Traes_5AL_9BC38814C D
Traes_5BL_F3018E8CA Triticum aestivum Traes_5BL_F3018E8CA I
Traes_5DL_75AEE92BB Triticum aestivum Traes_5DL_75AEE92BB I
Traes_7DL_67C4287B2 Triticum aestivum Traes_7DL_67C4287B2 I
TRIUR3_18341 Triticum urartu TRIUR3_18341 I
TRIUR3_31142 Triticum urartu TRIUR3_31142 I
VIT_02s0012g02250 Vitis vinifera VIT_02s0012g02250 I
GBF1 Vitis vinifera VIT_04s0023g01360 I
VIT_15s0046g01440 Vitis vinifera VIT_15s0046g01440 I
VIT_18s0001g12120 Vitis vinifera VIT_18s0001g12120 I
GRMZM2G011932 Zea mays GRMZM2G011932 I
GRMZM2G019106 Zea mays GRMZM2G019106 I
GRMZM2G074373 Zea mays GRMZM2G074373 I
GRMZM2G095078 Zea mays GRMZM2G095078 I
GRMZM2G117851 Zea mays GRMZM2G117851 I
GRMZM2G153144 Zea mays GRMZM2G153144 I
GRMZM2G160136 Zea mays GRMZM2G160136 I
GRMZM2G171370 Zea mays GRMZM2G171370 I
GRMZM2G358701 Zea mays GRMZM2G358701 I
GRMZM5G848942 Zea mays GRMZM5G848942 I
GRMZM5G884349 Zea mays GRMZM5G884349 I