CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G126566
(
Zea mays
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
GRMZM2G126566
T272052_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK21166.1
M01281_2.00
Cannabis sativa
HACCWAMY
RKTWGGTD
PBM
Lambert et al.(2019)
pTH11255
0.835
0.903
MYB43
M07127_2.00
Arabidopsis thaliana
NYYYACCWAMYWH
DWRKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB43_col_a
0.758
0.839
MYB99
M07151_2.00
Arabidopsis thaliana
NYYYACCWAMYHH
DDRKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB99_col_a
0.687
0.774
MYB99
M07152_2.00
Arabidopsis thaliana
YHYACCTAMYH
DRKTAGGTRDR
Dap-seq
OMalley et al.(2016)
MYB99_colamp_a
0.687
0.774
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G126566_P01
Myb
14
61
KGPWSAEEDEKLVTFLLTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL
GRMZM2G126566_P01
Myb
67
112
RGLLSSEEETTVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHI
GRMZM2G126566_P02
Myb
14
61
KGPWSAEEDEKLVTFLLTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL
GRMZM2G126566_P02
Myb
67
112
RGLLSSEEETTVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHI
GRMZM2G126566_P03
Myb
14
61
KGPWSAEEDEKLVTFLLTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL
GRMZM2G126566_P03
Myb
67
112
RGLLSSEEETTVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHI
Links
Other
Myb/SANT
family TFs
Other
Zea mays
TFs
252 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OPUNC08G12780
Oryza punctata
OPUNC08G12780
I
0.846
BGIOSGA030727
Oryza indica
BGIOSGA030727
I
0.844
F775_13107
Aegilops tauschii
F775_13107
I
0.844
GRMZM2G169356
Zea mays
GRMZM2G169356
I
0.844
GSMUA_Achr5G23110_001
Musa acuminata
GSMUA_Achr5G23110_001
I
0.844
ORGLA09G0071400
Oryza glaberrima
ORGLA09G0071400
I
0.844
ORUFI09G10320
Oryza rufipogon
ORUFI09G10320
I
0.844
OS09G0401000
Oryza sativa
OS09G0401000
I
0.844
Traes_5BL_D85C0EF26
Triticum aestivum
Traes_5BL_D85C0EF26
I
0.844
Traes_5DL_46D39C394
Triticum aestivum
Traes_5DL_46D39C394
I
0.844
Pavir.Ba02148
Panicum virgatum
Pavir.Ba02148
I
0.844
BGIOSGA028709
Oryza indica
BGIOSGA028709
I
0.843
ORGLA08G0134400
Oryza glaberrima
ORGLA08G0134400
I
0.843
Bo6g099800
Brassica oleracea
Bo6g099800
I
0.835
Bra004155
Brassica rapa
Bra004155
I
0.835
GLYMA02G41180
Glycine max
GLYMA02G41180
I
0.835
GLYMA11G33620
Glycine max
GLYMA11G33620
I
0.835
GLYMA14G39530
Glycine max
GLYMA14G39530
I
0.835
GLYMA18G04580
Glycine max
GLYMA18G04580
I
0.835
MTR_3g065440
Medicago truncatula
MTR_3g065440
I
0.835
MTR_5g078140
Medicago truncatula
MTR_5g078140
I
0.835
OB09G16260
Oryza brachyantha
OB09G16260
I
0.835
PRUPE_ppa009966mg
Prunus persica
PRUPE_ppa009966mg
I
0.835
MYB20
Arabidopsis lyrata
scaffold_201335.1
I
0.835
TCM_019116
Theobroma cacao
TCM_019116
I
0.835
MYB43
Vitis vinifera
VIT_14s0006g00450
I
0.835
Ca_13286
Cicer arietinum
Ca_13286
I
0.835
Pm013020
Prunus mume
Pm013020
I
0.835
cassava6251.valid.m1
Manihot esculenta
cassava6251.valid.m1
I
0.835
Cucsa.006170
Cucumis sativus
Cucsa.006170
I
0.835
Bostr.26959s0295
Boechera stricta
Bostr.26959s0295
I
0.835
Cagra.1300s0004
Capsella grandiflora
Cagra.1300s0004
I
0.835
Carubv10020766m.g
Capsella rubella
Carubv10020766m.g
I
0.835
Ciclev10012265m.g
Citrus clementina
Ciclev10012265m.g
I
0.835
Eucgr.F02864
Eucalyptus grandis
Eucgr.F02864
I
0.835
Eucgr.J01601
Eucalyptus grandis
Eucgr.J01601
I
0.835
gene30520-v1.0-hybrid
Fragaria vesca
gene30520-v1.0-hybrid
I
0.835
Gorai.001G205300
Gossypium raimondii
Gorai.001G205300
I
0.835
Gorai.004G064100
Gossypium raimondii
Gorai.004G064100
I
0.835
orange1.1g021498m.g
Citrus sinensis
orange1.1g021498m.g
I
0.835
Thhalv10019852m.g
Eutrema salsugineum
Thhalv10019852m.g
I
0.835
PK21166.1
Cannabis sativa
PK21166.1
D
0.835
cassava30009.valid.m1
Manihot esculenta
cassava30009.valid.m1
I
0.832
MYB20
Arabidopsis thaliana
AT1G66230
I
0.831
MLOC_50944
Hordeum vulgare
MLOC_50944
I
0.831
Gorai.008G060100
Gossypium raimondii
Gorai.008G060100
I
0.828
Pavir.Ba02149
Panicum virgatum
Pavir.Ba02149
I
0.828
Pavir.Bb01872
Panicum virgatum
Pavir.Bb01872
I
0.827
Cla009311
Citrullus lanatus
Cla009311
I
0.826
Lus10002296.g
Linum usitatissimum
Lus10002296.g
I
0.817
Lus10004043.g
Linum usitatissimum
Lus10004043.g
I
0.817
OB08G22860
Oryza brachyantha
OB08G22860
I
0.816
BRADI4G29796
Brachypodium distachyon
BRADI4G29796
I
0.814
Si031939m.g
Setaria italica
Si031939m.g
I
0.814
Cucsa.375180
Cucumis sativus
Cucsa.375180
I
0.811
Sb02g024250
Sorghum bicolor
Sb02g024250
I
0.809
Pavir.Fb01563
Panicum virgatum
Pavir.Fb01563
I
0.808
Sb02g024260
Sorghum bicolor
Sb02g024260
I
0.807
GSMUA_Achr7G12520_001
Musa acuminata
GSMUA_Achr7G12520_001
I
0.805
PGSC0003DMG400015668
Solanum tuberosum
PGSC0003DMG400015668
I
0.805
Si030711m.g
Setaria italica
Si030711m.g
I
0.805
Si032544m.g
Setaria italica
Si032544m.g
I
0.805
Solyc11g011050.1
Solanum lycopersicum
Solyc11g011050.1
I
0.805
Pavir.Fa00850
Panicum virgatum
Pavir.Fa00850
I
0.805
GRMZM2G106558
Zea mays
GRMZM2G106558
I
0.804
MDP0000602739
Malus domestica
MDP0000602739
I
0.801
Si014144m.g
Setaria italica
Si014144m.g
I
0.799
Bo2g013190
Brassica oleracea
Bo2g013190
I
0.798
Pavir.Bb01873
Panicum virgatum
Pavir.Bb01873
I
0.798
Pavir.Ba02150
Panicum virgatum
Pavir.Ba02150
I
0.797
Aquca_013_00661
Aquilegia coerulea
Aquca_013_00661
I
0.795
BRADI3G36370
Brachypodium distachyon
BRADI3G36370
I
0.794
BGIOSGA022649
Oryza indica
BGIOSGA022649
I
0.792
GRMZM2G048910
Zea mays
GRMZM2G048910
I
0.792
OB06G19130
Oryza brachyantha
OB06G19130
I
0.792
ORGLA06G0093500
Oryza glaberrima
ORGLA06G0093500
I
0.792
ORUFI06G10280
Oryza rufipogon
ORUFI06G10280
I
0.792
OS06G0258000
Oryza sativa
OS06G0258000
I
0.792
Sb10g009330
Sorghum bicolor
Sb10g009330
I
0.792
MTR_4g102380
Medicago truncatula
MTR_4g102380
I
0.791
Ca_08722
Cicer arietinum
Ca_08722
I
0.791
chr4.CM0126.370.nd
Lotus japonicus
chr4.CM0126.370.nd
I
0.791
POPTR_0012s14540
Populus trichocarpa
POPTR_0012s14540
I
0.790
TCM_014956
Theobroma cacao
TCM_014956
I
0.790
cassava47045.m1
Manihot esculenta
cassava47045.m1
I
0.790
Eucgr.K00153
Eucalyptus grandis
Eucgr.K00153
I
0.790
gene21264-v1.0-hybrid
Fragaria vesca
gene21264-v1.0-hybrid
I
0.790
Pavir.Db01743
Panicum virgatum
Pavir.Db01743
I
0.790
SapurV1A.0129s0270
Salix purpurea
SapurV1A.0129s0270
I
0.790
MDP0000787808
Malus domestica
MDP0000787808
I
0.789
Pavir.J21364
Panicum virgatum
Pavir.J21364
I
0.789
POPTR_0004s08480
Populus trichocarpa
POPTR_0004s08480
I
0.788
POPTR_0017s02850
Populus trichocarpa
POPTR_0017s02850
I
0.788
Solyc04g014470.2
Solanum lycopersicum
Solyc04g014470.2
I
0.788
Lus10004042.g
Linum usitatissimum
Lus10004042.g
I
0.788
SapurV1A.0390s0060
Salix purpurea
SapurV1A.0390s0060
I
0.788
GLYMA05G03780
Glycine max
GLYMA05G03780
I
0.787
GLYMA11G03300
Glycine max
GLYMA11G03300
I
0.787
GLYMA17G14291
Glycine max
GLYMA17G14291
I
0.787
PGSC0003DMG400004780
Solanum tuberosum
PGSC0003DMG400004780
I
0.787
POPTR_0001s07830
Populus trichocarpa
POPTR_0001s07830
I
0.787
POPTR_0003s11360
Populus trichocarpa
POPTR_0003s11360
I
0.787
PRUPE_ppa021568mg
Prunus persica
PRUPE_ppa021568mg
I
0.787
Solyc08g079270.2
Solanum lycopersicum
Solyc08g079270.2
I
0.787
TCM_016054
Theobroma cacao
TCM_016054
I
0.787
VIT_00s1241g00010
Vitis vinifera
VIT_00s1241g00010
I
0.787
Cla011736
Citrullus lanatus
Cla011736
I
0.787
Pm023573
Prunus mume
Pm023573
I
0.787
30190.m011004
Ricinus communis
30190.m011004
I
0.787
cassava2058.valid.m1
Manihot esculenta
cassava2058.valid.m1
I
0.787
cassava33331.m1
Manihot esculenta
cassava33331.m1
I
0.787
Cucsa.302180
Cucumis sativus
Cucsa.302180
I
0.787
mgf017719m
Mimulus guttatus
mgf017719m
I
0.787
Ciclev10021695m.g
Citrus clementina
Ciclev10021695m.g
I
0.787
gene32268-v1.0-hybrid
Fragaria vesca
gene32268-v1.0-hybrid
I
0.787
Gorai.003G168100
Gossypium raimondii
Gorai.003G168100
I
0.787
Gorai.004G201900
Gossypium raimondii
Gorai.004G201900
I
0.787
Gorai.008G238800
Gossypium raimondii
Gorai.008G238800
I
0.787
Lus10024589.g
Linum usitatissimum
Lus10024589.g
I
0.787
Lus10032226.g
Linum usitatissimum
Lus10032226.g
I
0.787
MDP0000682032
Malus domestica
MDP0000682032
I
0.787
orange1.1g024441m.g
Citrus sinensis
orange1.1g024441m.g
I
0.787
SapurV1A.0045s0090
Salix purpurea
SapurV1A.0045s0090
I
0.787
SapurV1A.0634s0020
Salix purpurea
SapurV1A.0634s0020
I
0.787
Gorai.006G064000
Gossypium raimondii
Gorai.006G064000
I
0.785
F775_29159
Aegilops tauschii
F775_29159
I
0.784
MLOC_14021
Hordeum vulgare
MLOC_14021
I
0.784
Traes_7DS_5100A9609
Triticum aestivum
Traes_7DS_5100A9609
I
0.784
GRMZM2G138427
Zea mays
GRMZM2G138427
I
0.782
PDK_20s1306131g002
Phoenix dactylifera
PDK_20s1306131g002
I
0.782
GSMUA_Achr10G29970_001
Musa acuminata
GSMUA_Achr10G29970_001
I
0.781
AMTR_s00091p00025820
Amborella trichopoda
AMTR_s00091p00025820
I
0.778
Si032498m.g
Setaria italica
Si032498m.g
I
0.778
Si007017m.g
Setaria italica
Si007017m.g
I
0.776
Bo9g163020
Brassica oleracea
Bo9g163020
I
0.775
cassava21367.m1
Manihot esculenta
cassava21367.m1
I
0.775
Lus10027197.g
Linum usitatissimum
Lus10027197.g
I
0.774
Lus10038913.g
Linum usitatissimum
Lus10038913.g
I
0.774
SapurV1A.0102s0470
Salix purpurea
SapurV1A.0102s0470
I
0.773
SapurV1A.1318s0060
Salix purpurea
SapurV1A.1318s0060
I
0.773
PRUPE_ppa011549mg
Prunus persica
PRUPE_ppa011549mg
I
0.771
Pm019472
Prunus mume
Pm019472
I
0.771
BGIOSGA005676
Oryza indica
BGIOSGA005676
I
0.762
BRADI3G56917
Brachypodium distachyon
BRADI3G56917
I
0.762
F775_17058
Aegilops tauschii
F775_17058
I
0.762
GRMZM2G055158
Zea mays
GRMZM2G055158
I
0.762
OB02G38450
Oryza brachyantha
OB02G38450
I
0.762
OGLUM02G32070
Oryza glumaepatula
OGLUM02G32070
I
0.762
ORGLA02G0269000
Oryza glaberrima
ORGLA02G0269000
I
0.762
ORUFI02G33090
Oryza rufipogon
ORUFI02G33090
I
0.762
OS02G0732600
Oryza sativa
OS02G0732600
I
0.762
Sb04g028850
Sorghum bicolor
Sb04g028850
I
0.762
Si020225m.g
Setaria italica
Si020225m.g
I
0.762
TRIUR3_16495
Triticum urartu
TRIUR3_16495
I
0.762
Pavir.Aa00435
Panicum virgatum
Pavir.Aa00435
I
0.762
Pavir.Da01229
Panicum virgatum
Pavir.Da01229
I
0.762
POPTR_0015s14600
Populus trichocarpa
POPTR_0015s14600
I
0.760
MYB43
Arabidopsis thaliana
AT5G16600
D
0.758
GSMUA_Achr9G15640_001
Musa acuminata
GSMUA_Achr9G15640_001
I
0.758
MYB43
Arabidopsis lyrata
scaffold_601700.1
I
0.758
Bostr.2902s0397
Boechera stricta
Bostr.2902s0397
I
0.758
Cagra.0434s0026
Capsella grandiflora
Cagra.0434s0026
I
0.758
Carubv10001378m.g
Capsella rubella
Carubv10001378m.g
I
0.758
Thhalv10014086m.g
Eutrema salsugineum
Thhalv10014086m.g
I
0.758
Bo3g107740
Brassica oleracea
Bo3g107740
I
0.757
GLYMA01G42050
Glycine max
GLYMA01G42050
I
0.757
SapurV1A.0367s0020
Salix purpurea
SapurV1A.0367s0020
I
0.756
SapurV1A.0456s0310
Salix purpurea
SapurV1A.0456s0310
I
0.756
GSMUA_Achr5G05910_001
Musa acuminata
GSMUA_Achr5G05910_001
I
0.753
PK08857.1
Cannabis sativa
PK08857.1
I
0.746
VIT_16s0022g01210
Vitis vinifera
VIT_16s0022g01210
I
0.745
Cla003626
Citrullus lanatus
Cla003626
I
0.745
Cucsa.115620
Cucumis sativus
Cucsa.115620
I
0.745
Ciclev10005666m.g
Citrus clementina
Ciclev10005666m.g
I
0.745
evm.TU.supercontig_3.300
Carica papaya
evm.TU.supercontig_3.300
I
0.745
orange1.1g024849m.g
Citrus sinensis
orange1.1g024849m.g
I
0.745
MYB42
Arabidopsis thaliana
AT4G12350
I
0.742
Eucgr.D02014
Eucalyptus grandis
Eucgr.D02014
I
0.742
Bo1g028520
Brassica oleracea
Bo1g028520
I
0.739
MYB85
Arabidopsis lyrata
fgenesh2_kg.7__2034__AT4G22680.1
I
0.739
Thhalv10027281m.g
Eutrema salsugineum
Thhalv10027281m.g
I
0.739
Gorai.006G195700
Gossypium raimondii
Gorai.006G195700
I
0.738
BGIOSGA029380
Oryza indica
BGIOSGA029380
I
0.737
BRADI3G42430
Brachypodium distachyon
BRADI3G42430
I
0.737
GRMZM2G037650
Zea mays
GRMZM2G037650
I
0.737
GRMZM2G104551
Zea mays
GRMZM2G104551
I
0.737
OB09G24070
Oryza brachyantha
OB09G24070
I
0.737
OLONG_005336
Oryza longistaminata
OLONG_005336
I
0.737
ORGLA09G0137500
Oryza glaberrima
ORGLA09G0137500
I
0.737
OS09G0532900
Oryza sativa
OS09G0532900
I
0.737
Sb02g030900
Sorghum bicolor
Sb02g030900
I
0.737
Pavir.Fb02321
Panicum virgatum
Pavir.Fb02321
I
0.737
Pavir.J36915
Panicum virgatum
Pavir.J36915
I
0.737
Bra013633
Brassica rapa
Bra013633
I
0.735
BGIOSGA026529
Oryza indica
BGIOSGA026529
I
0.734
OB08G29480
Oryza brachyantha
OB08G29480
I
0.734
ORGLA08G0217800
Oryza glaberrima
ORGLA08G0217800
I
0.734
ORUFI08G25210
Oryza rufipogon
ORUFI08G25210
I
0.734
Pavir.Ab02913
Panicum virgatum
Pavir.Ab02913
I
0.734
LPERR08G19430
Leersia perrieri
LPERR08G19430
I
0.730
GSMUA_Achr4G19880_001
Musa acuminata
GSMUA_Achr4G19880_001
I
0.728
Cagra.4003s0023
Capsella grandiflora
Cagra.4003s0023
I
0.727
Carubv10028436m.g
Capsella rubella
Carubv10028436m.g
I
0.727
Thhalv10004868m.g
Eutrema salsugineum
Thhalv10004868m.g
I
0.727
GSMUA_Achr7G18680_001
Musa acuminata
GSMUA_Achr7G18680_001
I
0.726
AMTR_s00049p00074250
Amborella trichopoda
AMTR_s00049p00074250
I
0.725
Sb07g024970
Sorghum bicolor
Sb07g024970
I
0.725
Si015412m.g
Setaria italica
Si015412m.g
I
0.725
MYB85
Arabidopsis thaliana
AT4G22680
I
0.721
Bo7g108060
Brassica oleracea
Bo7g108060
I
0.721
Bra019368
Brassica rapa
Bra019368
I
0.721
GSMUA_Achr1G22380_001
Musa acuminata
GSMUA_Achr1G22380_001
I
0.721
Bostr.7867s0052
Boechera stricta
Bostr.7867s0052
I
0.721
Cagra.6652s0005
Capsella grandiflora
Cagra.6652s0005
I
0.721
Carubv10005483m.g
Capsella rubella
Carubv10005483m.g
I
0.721
BRADI1G44070
Brachypodium distachyon
BRADI1G44070
I
0.719
MYB99
Arabidopsis lyrata
scaffold_802887.1
I
0.717
MYB42
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6002571
I
0.712
Bostr.25463s0081
Boechera stricta
Bostr.25463s0081
I
0.712
Cagra.14303s0002
Capsella grandiflora
Cagra.14303s0002
I
0.712
Carubv10003172m.g
Capsella rubella
Carubv10003172m.g
I
0.712
Thhalv10028864m.g
Eutrema salsugineum
Thhalv10028864m.g
I
0.712
Bostr.0568s0574
Boechera stricta
Bostr.0568s0574
I
0.710
GSMUA_Achr1G18610_001
Musa acuminata
GSMUA_Achr1G18610_001
I
0.708
Si030750m.g
Setaria italica
Si030750m.g
I
0.707
Pavir.Ba01239
Panicum virgatum
Pavir.Ba01239
I
0.707
Pavir.Bb02654
Panicum virgatum
Pavir.Bb02654
I
0.707
Lus10010974.g
Linum usitatissimum
Lus10010974.g
I
0.701
F775_19511
Aegilops tauschii
F775_19511
I
0.696
Traes_5BL_30D8E6BE2
Triticum aestivum
Traes_5BL_30D8E6BE2
I
0.696
Traes_5DL_0B2C5ADF6
Triticum aestivum
Traes_5DL_0B2C5ADF6
I
0.696
GSMUA_Achr7G05680_001
Musa acuminata
GSMUA_Achr7G05680_001
I
0.695
MYB99
Arabidopsis thaliana
AT5G62320
D
0.687
BRADI4G36210
Brachypodium distachyon
BRADI4G36210
I
0.687
MLOC_6696
Hordeum vulgare
MLOC_6696
I
0.686
Gorai.001G268000
Gossypium raimondii
Gorai.001G268000
I
0.686
Bo3g165540
Brassica oleracea
Bo3g165540
I
0.681
ORUFI09G18880
Oryza rufipogon
ORUFI09G18880
I
0.678
Solyc05g014290.2
Solanum lycopersicum
Solyc05g014290.2
I
0.677
GRMZM2G001223
Zea mays
GRMZM2G001223
I
0.671
Sb04g024000
Sorghum bicolor
Sb04g024000
I
0.671
Si017851m.g
Setaria italica
Si017851m.g
I
0.671
Pavir.Ab02021
Panicum virgatum
Pavir.Ab02021
I
0.671
Bra020837
Brassica rapa
Bra020837
I
0.668
cassava39861.m1
Manihot esculenta
cassava39861.m1
I
0.667
Gorai.007G074500
Gossypium raimondii
Gorai.007G074500
I
0.667
POPTR_0002s09720
Populus trichocarpa
POPTR_0002s09720
I
0.666
BRADI1G24887
Brachypodium distachyon
BRADI1G24887
I
0.661
GRMZM2G031323
Zea mays
GRMZM2G031323
I
0.661
Si030273m.g
Setaria italica
Si030273m.g
I
0.661
Pavir.Ba00668
Panicum virgatum
Pavir.Ba00668
I
0.661