CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GSMUA_Achr10G02290_001
(
Musa acuminata
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
GSMUA_Achr10G02290_001
T272224_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK27693.1
M01285_2.00
Cannabis sativa
NNYTATCBNN
NNVGATARNN
PBM
Lambert et al.(2019)
pTH11302
0.688
0.787
PK27213.1
M01284_2.00
Cannabis sativa
NHWATCNNNN
NNNNGATWDN
PBM
Lambert et al.(2019)
pTH10196
0.673
0.777
PK27213.1
M02356_2.00
Cannabis sativa
NHHATCNNNN
NNNNGATDDN
PBM
Weirauch et al.(2014)
pTH9600
0.673
0.777
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr10P02290_001
Myb
136
183
GVPWTEEEHKLFLLGLQKYGKGDWRNISRNLVITRTPTQVASHAQKYF
Links
Other
Myb/SANT
family TFs
Other
Musa acuminata
TFs
61 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_Achr10G22470_001
Musa acuminata
GSMUA_Achr10G22470_001
N
0.751
GSMUA_Achr6G33620_001
Musa acuminata
GSMUA_Achr6G33620_001
N
0.729
gene07984-v1.0-hybrid
Fragaria vesca
gene07984-v1.0-hybrid
I
0.717
Cla018243
Citrullus lanatus
Cla018243
I
0.712
Gorai.009G093700
Gossypium raimondii
Gorai.009G093700
I
0.708
cassava23356.valid.m1
Manihot esculenta
cassava23356.valid.m1
I
0.707
Lus10018209.g
Linum usitatissimum
Lus10018209.g
I
0.702
28288.m000014
Ricinus communis
28288.m000014
I
0.701
29681.m001296
Ricinus communis
29681.m001296
I
0.701
evm.TU.supercontig_112.58
Carica papaya
evm.TU.supercontig_112.58
I
0.701
VIT_06s0004g06100
Vitis vinifera
VIT_06s0004g06100
I
0.700
Cla013553
Citrullus lanatus
Cla013553
I
0.696
Cucsa.176140
Cucumis sativus
Cucsa.176140
I
0.694
Ca_15603
Cicer arietinum
Ca_15603
I
0.693
Aquca_009_00736
Aquilegia coerulea
Aquca_009_00736
I
0.692
evm.TU.supercontig_1130.1
Carica papaya
evm.TU.supercontig_1130.1
I
0.692
Lus10040696.g
Linum usitatissimum
Lus10040696.g
I
0.691
PK27693.1
Cannabis sativa
PK27693.1
D
0.688
GLYMA11G22960
Glycine max
GLYMA11G22960
I
0.686
GLYMA18G07250
Glycine max
GLYMA18G07250
I
0.686
MTR_5g069710
Medicago truncatula
MTR_5g069710
I
0.686
Cla004397
Citrullus lanatus
Cla004397
I
0.686
Cucsa.139090
Cucumis sativus
Cucsa.139090
I
0.686
POPTR_0001s25590
Populus trichocarpa
POPTR_0001s25590
I
0.684
Aquca_004_00289
Aquilegia coerulea
Aquca_004_00289
I
0.684
MTR_3g462790
Medicago truncatula
MTR_3g462790
I
0.681
Ca_19327
Cicer arietinum
Ca_19327
I
0.681
MDP0000243328
Malus domestica
MDP0000243328
I
0.680
MDP0000255630
Malus domestica
MDP0000255630
I
0.680
MDP0000292581
Malus domestica
MDP0000292581
I
0.680
TCM_041672
Theobroma cacao
TCM_041672
I
0.678
GLYMA02G39000
Glycine max
GLYMA02G39000
I
0.676
GLYMA14G37050
Glycine max
GLYMA14G37050
I
0.676
Ca_14247
Cicer arietinum
Ca_14247
I
0.676
Eucgr.J01940
Eucalyptus grandis
Eucgr.J01940
I
0.675
gene18815-v1.0-hybrid
Fragaria vesca
gene18815-v1.0-hybrid
I
0.675
Ciclev10028910m.g
Citrus clementina
Ciclev10028910m.g
I
0.674
orange1.1g021816m.g
Citrus sinensis
orange1.1g021816m.g
I
0.674
PK27213.1
Cannabis sativa
PK27213.1
D
0.673
Bra002610
Brassica rapa
Bra002610
I
0.672
GLYMA07G17660
Glycine max
GLYMA07G17660
I
0.668
GLYMA18G42530
Glycine max
GLYMA18G42530
I
0.668
POPTR_0016s11980
Populus trichocarpa
POPTR_0016s11980
I
0.668
cassava43688.valid.m1
Manihot esculenta
cassava43688.valid.m1
I
0.668
Gorai.002G261600
Gossypium raimondii
Gorai.002G261600
I
0.668
SapurV1A.0778s0020
Salix purpurea
SapurV1A.0778s0020
I
0.668
SapurV1A.3589s0010
Salix purpurea
SapurV1A.3589s0010
I
0.668
SapurV1A.0001s0790
Salix purpurea
SapurV1A.0001s0790
I
0.666
PRUPE_ppa009072mg
Prunus persica
PRUPE_ppa009072mg
I
0.665
BRADI2G23710
Brachypodium distachyon
BRADI2G23710
N
0.664
GSMUA_Achr8G02380_001
Musa acuminata
GSMUA_Achr8G02380_001
I
0.664
Gorai.006G180900
Gossypium raimondii
Gorai.006G180900
I
0.664
MTR_7g067080
Medicago truncatula
MTR_7g067080
I
0.663
Gorai.012G112000
Gossypium raimondii
Gorai.012G112000
I
0.663
SapurV1A.0041s0720
Salix purpurea
SapurV1A.0041s0720
I
0.663
SapurV1A.0164s0380
Salix purpurea
SapurV1A.0164s0380
I
0.663
Bo9g135730
Brassica oleracea
Bo9g135730
I
0.662
cassava23290.valid.m1
Manihot esculenta
cassava23290.valid.m1
I
0.662
Thhalv10014270m.g
Eutrema salsugineum
Thhalv10014270m.g
I
0.662
PGSC0003DMG400030348
Solanum tuberosum
PGSC0003DMG400030348
I
0.661
Solyc06g076770.2
Solanum lycopersicum
Solyc06g076770.2
I
0.661