CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr10G18880_001
(
Musa acuminata
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
GSMUA_Achr10G18880_001
T272249_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB124
M01267_2.00
Arabidopsis thaliana
NNVCGCKCBN
NVGMGCGBNN
PBM
Lambert et al.(2019)
pTH11556
0.716
0.791
MYB88
M07042_2.00
Arabidopsis thaliana
NNNHNACGCKCCDHH
DDHGGMGCGTNDNNN
Dap-seq
OMalley et al.(2016)
MYB88_col_a
0.696
0.758
MYB88
M07043_2.00
Arabidopsis thaliana
NNNACGCTCCHNN
NNDGGAGCGTNNN
Dap-seq
OMalley et al.(2016)
MYB88_colamp_a
0.696
0.758
MYB88
M11038_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYB88_01
0.696
0.758
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr10P18880_001
Myb
28
73
VTWTSQEDDLLREHIALHGTDNWTSIAALFKDKTSRQCRRRWYTYL
GSMUA_Achr10P18880_001
Myb
79
123
KGGWSAEEDMLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTL
Links
Other
Myb/SANT
family TFs
Other
Musa acuminata
TFs
73 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_Achr6G10650_001
Musa acuminata
GSMUA_Achr6G10650_001
I
0.821
evm.TU.supercontig_183.27
Carica papaya
evm.TU.supercontig_183.27
I
0.786
POPTR_0010s10310
Populus trichocarpa
POPTR_0010s10310
I
0.778
cassava35260.valid.m1
Manihot esculenta
cassava35260.valid.m1
I
0.778
cassava39089.m1
Manihot esculenta
cassava39089.m1
I
0.778
Gorai.005G139500
Gossypium raimondii
Gorai.005G139500
I
0.778
MDP0000165523
Malus domestica
MDP0000165523
I
0.778
SapurV1A.0062s0030
Salix purpurea
SapurV1A.0062s0030
I
0.778
29736.m002013
Ricinus communis
29736.m002013
I
0.758
GLYMA18G16040
Glycine max
GLYMA18G16040
I
0.756
PRUPE_ppa017536mg
Prunus persica
PRUPE_ppa017536mg
I
0.756
Pm006532
Prunus mume
Pm006532
I
0.756
AMTR_s00010p00252990
Amborella trichopoda
AMTR_s00010p00252990
I
0.752
GLYMA02G02310
Glycine max
GLYMA02G02310
I
0.748
MTR_5g038910
Medicago truncatula
MTR_5g038910
I
0.748
TCM_011776
Theobroma cacao
TCM_011776
I
0.748
Ca_18779
Cicer arietinum
Ca_18779
I
0.748
Ciclev10031405m.g
Citrus clementina
Ciclev10031405m.g
I
0.748
Gorai.013G083300
Gossypium raimondii
Gorai.013G083300
I
0.748
orange1.1g044977m.g
Citrus sinensis
orange1.1g044977m.g
I
0.748
VIT_01s0026g01910
Vitis vinifera
VIT_01s0026g01910
I
0.745
GLYMA01G05190
Glycine max
GLYMA01G05190
I
0.739
GRMZM2G064630
Zea mays
GRMZM2G064630
I
0.739
POPTR_0008s14790
Populus trichocarpa
POPTR_0008s14790
I
0.739
SapurV1A.0200s0020
Salix purpurea
SapurV1A.0200s0020
I
0.739
PK05123.1
Cannabis sativa
PK05123.1
I
0.739
GLYMA08G40950
Glycine max
GLYMA08G40950
I
0.735
MDP0000210970
Malus domestica
MDP0000210970
I
0.733
MTR_8g468380
Medicago truncatula
MTR_8g468380
I
0.729
Si029124m.g
Setaria italica
Si029124m.g
I
0.729
Eucgr.B03417
Eucalyptus grandis
Eucgr.B03417
I
0.728
Lus10012847.g
Linum usitatissimum
Lus10012847.g
I
0.728
Lus10030494.g
Linum usitatissimum
Lus10030494.g
I
0.728
PGSC0003DMG400025612
Solanum tuberosum
PGSC0003DMG400025612
I
0.724
Solyc05g007160.2
Solanum lycopersicum
Solyc05g007160.2
I
0.724
BGIOSGA026188
Oryza indica
BGIOSGA026188
I
0.722
OBART07G22930
Oryza barthii
OBART07G22930
I
0.722
OGLUM07G22980
Oryza glumaepatula
OGLUM07G22980
I
0.722
ORGLA07G0179200
Oryza glaberrima
ORGLA07G0179200
I
0.722
ORUFI07G24080
Oryza rufipogon
ORUFI07G24080
I
0.722
OS07G0627300
Oryza sativa
OS07G0627300
I
0.722
Sb02g040050
Sorghum bicolor
Sb02g040050
I
0.722
Pavir.J36475
Panicum virgatum
Pavir.J36475
I
0.720
Aquca_002_00543
Aquilegia coerulea
Aquca_002_00543
I
0.719
PDK_20s1473891g001
Phoenix dactylifera
PDK_20s1473891g001
I
0.719
OB07G28520
Oryza brachyantha
OB07G28520
I
0.717
MYB124
Arabidopsis thaliana
AT1G14350
D
0.716
Bra019658
Brassica rapa
Bra019658
I
0.716
Thhalv10007659m.g
Eutrema salsugineum
Thhalv10007659m.g
I
0.716
OPUNC07G21540
Oryza punctata
OPUNC07G21540
I
0.713
Cla010333
Citrullus lanatus
Cla010333
I
0.712
Cucsa.285270
Cucumis sativus
Cucsa.285270
I
0.712
Eucgr.G02522
Eucalyptus grandis
Eucgr.G02522
I
0.711
Bo5g019500
Brassica oleracea
Bo5g019500
I
0.707
Bo7g080730
Brassica oleracea
Bo7g080730
I
0.704
Bra024804
Brassica rapa
Bra024804
I
0.704
Bostr.13671s0016
Boechera stricta
Bostr.13671s0016
I
0.701
Cagra.3501s0066
Capsella grandiflora
Cagra.3501s0066
I
0.701
Carubv10011707m.g
Capsella rubella
Carubv10011707m.g
I
0.701
Pavir.Bb03405
Panicum virgatum
Pavir.Bb03405
I
0.699
Traes_2AS_1161E1D2E
Triticum aestivum
Traes_2AS_1161E1D2E
I
0.697
Traes_2BS_F1B450FA4
Triticum aestivum
Traes_2BS_F1B450FA4
I
0.697
Traes_2DS_9430AAD52
Triticum aestivum
Traes_2DS_9430AAD52
I
0.697
MYB88
Arabidopsis thaliana
AT2G02820
D
0.696
Bo2g136560
Brassica oleracea
Bo2g136560
I
0.696
MYB88
Arabidopsis lyrata
fgenesh2_kg.5__181__AT2G02820.2
I
0.696
Thhalv10004109m.g
Eutrema salsugineum
Thhalv10004109m.g
I
0.696
Cagra.0534s0022
Capsella grandiflora
Cagra.0534s0022
I
0.688
Carubv10017119m.g
Capsella rubella
Carubv10017119m.g
I
0.688
FLP
Arabidopsis lyrata
fgenesh2_kg.1__1561__AT1G14350.1
I
0.686
mgf009409m
Mimulus guttatus
mgf009409m
I
0.680
LPERR07G19800
Leersia perrieri
LPERR07G19800
I
0.674
Bostr.0556s0099
Boechera stricta
Bostr.0556s0099
I
0.666