GSMUA_Achr10G22620_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr10G22620_001 T272255_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.909 1.000
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.891 0.957
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.883 0.936
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.883 0.936
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.831 0.957
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr10P22620_001 Myb 611 661

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSMEUG00000013008 Macropus eugenii ENSMEUG00000013008 N
ENSNLEG00000006719 Nomascus leucogenys ENSNLEG00000006719 N
ENSP00000240050-D1 Bos grunniens ENSP00000240050-D1 N
ENSPPYG00000004910 Pongo abelii ENSPPYG00000004910 N
ENSSTOG00000010181 Ictidomys tridecemlineatus ENSSTOG00000010181 N
ENSTSYG00000010530 Tarsius syrichta ENSTSYG00000010530 N
MTERF2 Callithrix jacchus ENSCJAG00000015094 N
MTERF2 Vicugna pacos ENSVPAG00000008539 N
MTERF2 Tursiops truncatus ENSTTRG00000012809 N
Mterf2 Rattus norvegicus ENSRNOG00000006978 N
MTERF2 Pan troglodytes ENSPTRG00000005395 N
MTERF2 Procavia capensis ENSPCAG00000008234 N
MTERF2 Ochotona princeps ENSOPRG00000008669 N
Mterf2 Mus musculus ENSMUSG00000049038 N
MTERF2 Monodelphis domestica ENSMODG00000001589 N
MTERF2 Gorilla gorilla ENSGGOG00000025492 N
MTERF2 Homo sapiens ENSG00000120832 N
Mterf2 Dipodomys ordii ENSDORG00000004167 N
MTERF2 Cavia porcellus ENSCPOG00000006958 N
MTERF2 Bos taurus ENSBTAG00000010144 N
Myotis_brandtii_Cry1_10020414 Myotis brandtii Myotis_brandtii_Cry1_10020414 N
Tal_R009668 Tyto alba Tal_R009668 N