CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr6G06800_001
(
Musa acuminata
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
GSMUA_Achr6G06800_001
T272520_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AtMYB40
M07126_2.00
Arabidopsis thaliana
YYYACCWAMYHHH
DDDRKTWGGTRRR
Dap-seq
OMalley et al.(2016)
MYB40_col_a
0.681
0.742
PK21166.1
M01281_2.00
Cannabis sativa
HACCWAMY
RKTWGGTD
PBM
Lambert et al.(2019)
pTH11255
0.668
0.753
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr6P06800_001
Myb
35
82
RGAWTAEEDQKLINFIINNGIHCWRLVPKLAGLMRCGKSCRLRWTNYL
GSMUA_Achr6P06800_001
Myb
88
133
REAISQEEESQIIQLHSRLGNRWSKIASYFPGRTDNEIKNHWNTRI
Links
Other
Myb/SANT
family TFs
Other
Musa acuminata
TFs
216 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400012648
Solanum tuberosum
PGSC0003DMG400012648
I
0.813
Solyc02g093740.2
Solanum lycopersicum
Solyc02g093740.2
I
0.813
TCM_017051
Theobroma cacao
TCM_017051
I
0.812
Eucgr.J02279
Eucalyptus grandis
Eucgr.J02279
I
0.812
Gorai.006G037500
Gossypium raimondii
Gorai.006G037500
I
0.812
AtMYB40
Vitis vinifera
VIT_14s0219g00050
I
0.804
mgf018940m
Mimulus guttatus
mgf018940m
I
0.804
Eucgr.I01698
Eucalyptus grandis
Eucgr.I01698
I
0.800
cassava17364.m1
Manihot esculenta
cassava17364.m1
I
0.797
29929.m004749
Ricinus communis
29929.m004749
I
0.793
Lus10032117.g
Linum usitatissimum
Lus10032117.g
I
0.793
cassava3745.m1
Manihot esculenta
cassava3745.m1
I
0.790
POPTR_0001s36220
Populus trichocarpa
POPTR_0001s36220
I
0.789
evm.TU.supercontig_1097.3
Carica papaya
evm.TU.supercontig_1097.3
I
0.789
Aquca_011_00323
Aquilegia coerulea
Aquca_011_00323
I
0.784
Ca_19393
Cicer arietinum
Ca_19393
I
0.783
PRUPE_ppa026877mg
Prunus persica
PRUPE_ppa026877mg
I
0.782
gene28021-v1.0-hybrid
Fragaria vesca
gene28021-v1.0-hybrid
I
0.782
GSMUA_AchrUn_randomG11880_001
Musa acuminata
GSMUA_AchrUn_randomG11880_001
N
0.780
Cla004104
Citrullus lanatus
Cla004104
I
0.778
Cucsa.156340
Cucumis sativus
Cucsa.156340
I
0.778
Gorai.007G074500
Gossypium raimondii
Gorai.007G074500
I
0.778
SapurV1A.0206s0260
Salix purpurea
SapurV1A.0206s0260
I
0.772
Ciclev10017764m.g
Citrus clementina
Ciclev10017764m.g
I
0.771
Lus10014569.g
Linum usitatissimum
Lus10014569.g
I
0.769
GLYMA16G06900
Glycine max
GLYMA16G06900
I
0.767
Pm015564
Prunus mume
Pm015564
I
0.767
cassava15064.m1
Manihot esculenta
cassava15064.m1
I
0.764
MDP0000241111
Malus domestica
MDP0000241111
I
0.763
MDP0000303239
Malus domestica
MDP0000303239
I
0.763
AMTR_s00049p00074250
Amborella trichopoda
AMTR_s00049p00074250
I
0.759
SapurV1A.0136s0070
Salix purpurea
SapurV1A.0136s0070
I
0.759
GLYMA19G07830
Glycine max
GLYMA19G07830
I
0.753
Solyc05g014290.2
Solanum lycopersicum
Solyc05g014290.2
I
0.752
GLYMA05G06410
Glycine max
GLYMA05G06410
I
0.750
AtMYB40
Populus trichocarpa
POPTR_0008s18110
I
0.748
Gorai.001G268000
Gossypium raimondii
Gorai.001G268000
I
0.734
mgf025004m
Mimulus guttatus
mgf025004m
I
0.732
Aquca_011_00322
Aquilegia coerulea
Aquca_011_00322
I
0.731
PGSC0003DMG400011976
Solanum tuberosum
PGSC0003DMG400011976
I
0.727
Gorai.006G064000
Gossypium raimondii
Gorai.006G064000
I
0.713
GLYMA01G42050
Glycine max
GLYMA01G42050
I
0.711
GLYMA11G03300
Glycine max
GLYMA11G03300
I
0.711
mgf017719m
Mimulus guttatus
mgf017719m
I
0.711
Gorai.008G238800
Gossypium raimondii
Gorai.008G238800
I
0.703
Bo3g009730
Brassica oleracea
Bo3g009730
I
0.701
Bo9g166000
Brassica oleracea
Bo9g166000
I
0.701
Bra006249
Brassica rapa
Bra006249
I
0.701
Bra008764
Brassica rapa
Bra008764
I
0.701
GSMUA_Achr7G12520_001
Musa acuminata
GSMUA_Achr7G12520_001
I
0.698
MTR_4g102380
Medicago truncatula
MTR_4g102380
I
0.698
PGSC0003DMG400015668
Solanum tuberosum
PGSC0003DMG400015668
I
0.698
Solyc11g011050.1
Solanum lycopersicum
Solyc11g011050.1
I
0.698
Ca_08722
Cicer arietinum
Ca_08722
I
0.698
PK08857.1
Cannabis sativa
PK08857.1
I
0.698
chr4.CM0126.370.nd
Lotus japonicus
chr4.CM0126.370.nd
I
0.698
GLYMA05G03780
Glycine max
GLYMA05G03780
I
0.694
GLYMA17G14291
Glycine max
GLYMA17G14291
I
0.694
PGSC0003DMG400004780
Solanum tuberosum
PGSC0003DMG400004780
I
0.694
POPTR_0001s07830
Populus trichocarpa
POPTR_0001s07830
I
0.694
POPTR_0003s11360
Populus trichocarpa
POPTR_0003s11360
I
0.694
PRUPE_ppa021568mg
Prunus persica
PRUPE_ppa021568mg
I
0.694
Si030711m.g
Setaria italica
Si030711m.g
I
0.694
Si031939m.g
Setaria italica
Si031939m.g
I
0.694
Si032544m.g
Setaria italica
Si032544m.g
I
0.694
Solyc08g079270.2
Solanum lycopersicum
Solyc08g079270.2
I
0.694
TCM_016054
Theobroma cacao
TCM_016054
I
0.694
VIT_00s1241g00010
Vitis vinifera
VIT_00s1241g00010
I
0.694
Cla011736
Citrullus lanatus
Cla011736
I
0.694
Pm023573
Prunus mume
Pm023573
I
0.694
30190.m011004
Ricinus communis
30190.m011004
I
0.694
cassava2058.valid.m1
Manihot esculenta
cassava2058.valid.m1
I
0.694
cassava33331.m1
Manihot esculenta
cassava33331.m1
I
0.694
Cucsa.302180
Cucumis sativus
Cucsa.302180
I
0.694
Bostr.25463s0081
Boechera stricta
Bostr.25463s0081
I
0.694
Cagra.14303s0002
Capsella grandiflora
Cagra.14303s0002
I
0.694
Carubv10003172m.g
Capsella rubella
Carubv10003172m.g
I
0.694
Ciclev10021695m.g
Citrus clementina
Ciclev10021695m.g
I
0.694
Eucgr.D02014
Eucalyptus grandis
Eucgr.D02014
I
0.694
gene32268-v1.0-hybrid
Fragaria vesca
gene32268-v1.0-hybrid
I
0.694
Gorai.003G168100
Gossypium raimondii
Gorai.003G168100
I
0.694
Gorai.004G201900
Gossypium raimondii
Gorai.004G201900
I
0.694
Lus10024589.g
Linum usitatissimum
Lus10024589.g
I
0.694
Lus10032226.g
Linum usitatissimum
Lus10032226.g
I
0.694
MDP0000682032
Malus domestica
MDP0000682032
I
0.694
orange1.1g024441m.g
Citrus sinensis
orange1.1g024441m.g
I
0.694
Pavir.Bb01873
Panicum virgatum
Pavir.Bb01873
I
0.694
Pavir.J21364
Panicum virgatum
Pavir.J21364
I
0.694
SapurV1A.0045s0090
Salix purpurea
SapurV1A.0045s0090
I
0.694
SapurV1A.0634s0020
Salix purpurea
SapurV1A.0634s0020
I
0.694
POPTR_0015s14600
Populus trichocarpa
POPTR_0015s14600
I
0.691
TCM_014956
Theobroma cacao
TCM_014956
I
0.691
VIT_16s0022g01210
Vitis vinifera
VIT_16s0022g01210
I
0.691
Cla003626
Citrullus lanatus
Cla003626
I
0.691
cassava47045.m1
Manihot esculenta
cassava47045.m1
I
0.691
Aquca_013_00661
Aquilegia coerulea
Aquca_013_00661
I
0.691
Ciclev10005666m.g
Citrus clementina
Ciclev10005666m.g
I
0.691
evm.TU.supercontig_3.300
Carica papaya
evm.TU.supercontig_3.300
I
0.691
Lus10027197.g
Linum usitatissimum
Lus10027197.g
I
0.691
Lus10038913.g
Linum usitatissimum
Lus10038913.g
I
0.691
orange1.1g024849m.g
Citrus sinensis
orange1.1g024849m.g
I
0.691
SapurV1A.0367s0020
Salix purpurea
SapurV1A.0367s0020
I
0.691
SapurV1A.0456s0310
Salix purpurea
SapurV1A.0456s0310
I
0.691
GSMUA_Achr4G19880_001
Musa acuminata
GSMUA_Achr4G19880_001
I
0.690
Pavir.Da01229
Panicum virgatum
Pavir.Da01229
I
0.690
AtMYB40
Arabidopsis thaliana
AT5G14340
D
0.681
PRUPE_ppa011549mg
Prunus persica
PRUPE_ppa011549mg
I
0.681
Pm019472
Prunus mume
Pm019472
I
0.681
Bostr.2902s0170
Boechera stricta
Bostr.2902s0170
I
0.681
Cagra.3166s0041
Capsella grandiflora
Cagra.3166s0041
I
0.681
Gorai.006G195700
Gossypium raimondii
Gorai.006G195700
I
0.681
MDP0000602739
Malus domestica
MDP0000602739
I
0.681
Thhalv10014425m.g
Eutrema salsugineum
Thhalv10014425m.g
I
0.681
GSMUA_Achr9G15640_001
Musa acuminata
GSMUA_Achr9G15640_001
I
0.679
Solyc04g014470.2
Solanum lycopersicum
Solyc04g014470.2
I
0.678
Cla009311
Citrullus lanatus
Cla009311
I
0.677
cassava21367.m1
Manihot esculenta
cassava21367.m1
I
0.677
Gorai.004G064100
Gossypium raimondii
Gorai.004G064100
I
0.677
Pavir.Ba02150
Panicum virgatum
Pavir.Ba02150
I
0.677
GRMZM2G037650
Zea mays
GRMZM2G037650
I
0.675
GRMZM2G104551
Zea mays
GRMZM2G104551
I
0.675
GRMZM2G138427
Zea mays
GRMZM2G138427
I
0.675
Sb02g030900
Sorghum bicolor
Sb02g030900
I
0.675
Si030750m.g
Setaria italica
Si030750m.g
I
0.675
Pavir.Ba01239
Panicum virgatum
Pavir.Ba01239
I
0.675
Pavir.Bb02654
Panicum virgatum
Pavir.Bb02654
I
0.675
Pavir.Fb02321
Panicum virgatum
Pavir.Fb02321
I
0.675
Pavir.J36915
Panicum virgatum
Pavir.J36915
I
0.675
PDK_20s1306131g002
Phoenix dactylifera
PDK_20s1306131g002
I
0.675
GRMZM2G106558
Zea mays
GRMZM2G106558
I
0.674
Si014144m.g
Setaria italica
Si014144m.g
I
0.674
Pavir.Fb01563
Panicum virgatum
Pavir.Fb01563
I
0.674
BGIOSGA026529
Oryza indica
BGIOSGA026529
I
0.672
BGIOSGA029380
Oryza indica
BGIOSGA029380
I
0.672
OB08G29480
Oryza brachyantha
OB08G29480
I
0.672
OB09G24070
Oryza brachyantha
OB09G24070
I
0.672
OLONG_005336
Oryza longistaminata
OLONG_005336
I
0.672
ORGLA08G0217800
Oryza glaberrima
ORGLA08G0217800
I
0.672
ORGLA09G0137500
Oryza glaberrima
ORGLA09G0137500
I
0.672
ORUFI08G25210
Oryza rufipogon
ORUFI08G25210
I
0.672
OS09G0532900
Oryza sativa
OS09G0532900
I
0.672
GSMUA_Achr7G05680_001
Musa acuminata
GSMUA_Achr7G05680_001
I
0.671
Pavir.Fa00850
Panicum virgatum
Pavir.Fa00850
I
0.671
Eucgr.K00153
Eucalyptus grandis
Eucgr.K00153
I
0.670
BRADI3G36370
Brachypodium distachyon
BRADI3G36370
I
0.669
BRADI3G42430
Brachypodium distachyon
BRADI3G42430
I
0.669
F775_19511
Aegilops tauschii
F775_19511
I
0.669
Traes_5BL_30D8E6BE2
Triticum aestivum
Traes_5BL_30D8E6BE2
I
0.669
Traes_5DL_0B2C5ADF6
Triticum aestivum
Traes_5DL_0B2C5ADF6
I
0.669
MDP0000787808
Malus domestica
MDP0000787808
I
0.669
GLYMA02G41180
Glycine max
GLYMA02G41180
I
0.668
GLYMA11G33620
Glycine max
GLYMA11G33620
I
0.668
GLYMA14G39530
Glycine max
GLYMA14G39530
I
0.668
GLYMA18G04580
Glycine max
GLYMA18G04580
I
0.668
GSMUA_Achr5G23110_001
Musa acuminata
GSMUA_Achr5G23110_001
I
0.668
LPERR08G19430
Leersia perrieri
LPERR08G19430
I
0.668
MTR_3g065440
Medicago truncatula
MTR_3g065440
I
0.668
MTR_5g078140
Medicago truncatula
MTR_5g078140
I
0.668
PRUPE_ppa009966mg
Prunus persica
PRUPE_ppa009966mg
I
0.668
MYB20
Arabidopsis lyrata
scaffold_201335.1
I
0.668
TCM_019116
Theobroma cacao
TCM_019116
I
0.668
MYB43
Vitis vinifera
VIT_14s0006g00450
I
0.668
Ca_13286
Cicer arietinum
Ca_13286
I
0.668
Pm013020
Prunus mume
Pm013020
I
0.668
cassava6251.valid.m1
Manihot esculenta
cassava6251.valid.m1
I
0.668
Cucsa.006170
Cucumis sativus
Cucsa.006170
I
0.668
Ciclev10012265m.g
Citrus clementina
Ciclev10012265m.g
I
0.668
Eucgr.F02864
Eucalyptus grandis
Eucgr.F02864
I
0.668
Eucgr.J01601
Eucalyptus grandis
Eucgr.J01601
I
0.668
gene30520-v1.0-hybrid
Fragaria vesca
gene30520-v1.0-hybrid
I
0.668
Gorai.008G060100
Gossypium raimondii
Gorai.008G060100
I
0.668
orange1.1g021498m.g
Citrus sinensis
orange1.1g021498m.g
I
0.668
Thhalv10019852m.g
Eutrema salsugineum
Thhalv10019852m.g
I
0.668
PK21166.1
Cannabis sativa
PK21166.1
D
0.668
OPUNC08G12780
Oryza punctata
OPUNC08G12780
I
0.667
Si032498m.g
Setaria italica
Si032498m.g
I
0.667
Bo6g099800
Brassica oleracea
Bo6g099800
I
0.665
Bra004155
Brassica rapa
Bra004155
I
0.665
cassava30009.valid.m1
Manihot esculenta
cassava30009.valid.m1
I
0.665
fgenesh1_pg.scaffold_420000003
Physcomitrella patens
fgenesh1_pg.scaffold_420000003
I
0.665
Bostr.26959s0295
Boechera stricta
Bostr.26959s0295
I
0.665
Cagra.1300s0004
Capsella grandiflora
Cagra.1300s0004
I
0.665
Carubv10020766m.g
Capsella rubella
Carubv10020766m.g
I
0.665
Gorai.001G205300
Gossypium raimondii
Gorai.001G205300
I
0.665
MYB20
Arabidopsis thaliana
AT1G66230
I
0.664
MYB42
Arabidopsis thaliana
AT4G12350
I
0.664
BGIOSGA028709
Oryza indica
BGIOSGA028709
I
0.664
BGIOSGA030727
Oryza indica
BGIOSGA030727
I
0.664
Bo3g165540
Brassica oleracea
Bo3g165540
I
0.664
Bra013633
Brassica rapa
Bra013633
I
0.664
BRADI4G29796
Brachypodium distachyon
BRADI4G29796
I
0.664
F775_13107
Aegilops tauschii
F775_13107
I
0.664
MYB42
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6002571
I
0.664
GRMZM2G169356
Zea mays
GRMZM2G169356
I
0.664
OB09G16260
Oryza brachyantha
OB09G16260
I
0.664
ORGLA08G0134400
Oryza glaberrima
ORGLA08G0134400
I
0.664
ORGLA09G0071400
Oryza glaberrima
ORGLA09G0071400
I
0.664
ORUFI09G10320
Oryza rufipogon
ORUFI09G10320
I
0.664
OS09G0401000
Oryza sativa
OS09G0401000
I
0.664
Sb02g024260
Sorghum bicolor
Sb02g024260
I
0.664
Traes_5BL_D85C0EF26
Triticum aestivum
Traes_5BL_D85C0EF26
I
0.664
Traes_5DL_46D39C394
Triticum aestivum
Traes_5DL_46D39C394
I
0.664
Lus10002296.g
Linum usitatissimum
Lus10002296.g
I
0.664
Lus10004043.g
Linum usitatissimum
Lus10004043.g
I
0.664
Pavir.Ba02148
Panicum virgatum
Pavir.Ba02148
I
0.664
Pavir.Ba02149
Panicum virgatum
Pavir.Ba02149
I
0.664
Thhalv10028864m.g
Eutrema salsugineum
Thhalv10028864m.g
I
0.664
Sb07g024970
Sorghum bicolor
Sb07g024970
I
0.663
Si015412m.g
Setaria italica
Si015412m.g
I
0.663
Bo1g028520
Brassica oleracea
Bo1g028520
I
0.661
MYB85
Arabidopsis lyrata
fgenesh2_kg.7__2034__AT4G22680.1
I
0.661
OB08G22860
Oryza brachyantha
OB08G22860
I
0.661
POPTR_0012s14540
Populus trichocarpa
POPTR_0012s14540
I
0.661
Cucsa.115620
Cucumis sativus
Cucsa.115620
I
0.661
gene21264-v1.0-hybrid
Fragaria vesca
gene21264-v1.0-hybrid
I
0.661
SapurV1A.0129s0270
Salix purpurea
SapurV1A.0129s0270
I
0.661