GSMUA_Achr8G02380_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr8G02380_001 T272605_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK27693.1
M01285_2.00 		Cannabis sativa
NNYTATCBNN
NNVGATARNN		 PBM
Lambert et al.(2019)
pTH11302 		0.699 0.777
PK27213.1
M01284_2.00 		Cannabis sativa
NHWATCNNNN
NNNNGATWDN		 PBM
Lambert et al.(2019)
pTH10196 		0.666 0.755
PK27213.1
M02356_2.00 		Cannabis sativa
NHHATCNNNN
NNNNGATDDN		 PBM
Weirauch et al.(2014)
pTH9600 		0.666 0.755
AT2G38090
M07055_2.00 		Arabidopsis thaliana
HHBAWNYTTATCYWNWHYNBN
NVNRDWNWRGATAARNWTVDD		 Dap-seq
OMalley et al.(2016)
At2g38090_col_a 		0.662 0.755
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr8P02380_001 Myb 36 85
GSMUA_Achr8P02380_001 Myb 142 189

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr5G28940_001 Musa acuminata GSMUA_Achr5G28940_001 I 0.814
GSMUA_Achr10G00660_001 Musa acuminata GSMUA_Achr10G00660_001 I 0.801
28288.m000014 Ricinus communis 28288.m000014 I 0.714
evm.TU.supercontig_1130.1 Carica papaya evm.TU.supercontig_1130.1 I 0.703
PRUPE_ppa009072mg Prunus persica PRUPE_ppa009072mg I 0.699
Pm000529 Prunus mume Pm000529 I 0.699
PK27693.1 Cannabis sativa PK27693.1 D 0.699
TCM_021750 Theobroma cacao TCM_021750 I 0.689
cassava43688.valid.m1 Manihot esculenta cassava43688.valid.m1 I 0.689
Gorai.002G261600 Gossypium raimondii Gorai.002G261600 I 0.689
MTR_5g069710 Medicago truncatula MTR_5g069710 I 0.687
TCM_041672 Theobroma cacao TCM_041672 I 0.687
29681.m001296 Ricinus communis 29681.m001296 I 0.687
Eucgr.B02800 Eucalyptus grandis Eucgr.B02800 I 0.687
evm.TU.supercontig_112.58 Carica papaya evm.TU.supercontig_112.58 I 0.687
Gorai.012G112000 Gossypium raimondii Gorai.012G112000 I 0.685
POPTR_0006s09860 Populus trichocarpa POPTR_0006s09860 I 0.684
POPTR_0016s11980 Populus trichocarpa POPTR_0016s11980 I 0.684
SapurV1A.0778s0020 Salix purpurea SapurV1A.0778s0020 I 0.684
SapurV1A.3589s0010 Salix purpurea SapurV1A.3589s0010 I 0.684
cassava23356.valid.m1 Manihot esculenta cassava23356.valid.m1 I 0.683
Ciclev10012285m.g Citrus clementina Ciclev10012285m.g I 0.678
orange1.1g021756m.g Citrus sinensis orange1.1g021756m.g I 0.678
MTR_3g462790 Medicago truncatula MTR_3g462790 I 0.675
VIT_08s0007g01920 Vitis vinifera VIT_08s0007g01920 I 0.673
GLYMA01G27720 Glycine max GLYMA01G27720 I 0.672
GLYMA03G14440 Glycine max GLYMA03G14440 I 0.672
GLYMA14G37050 Glycine max GLYMA14G37050 I 0.672
gene07984-v1.0-hybrid Fragaria vesca gene07984-v1.0-hybrid I 0.672
GSMUA_Achr8G02370_001 Musa acuminata GSMUA_Achr8G02370_001 N 0.670
Solyc10g076820.1 Solanum lycopersicum Solyc10g076820.1 I 0.669
Cla004397 Citrullus lanatus Cla004397 I 0.669
MTR_7g067080 Medicago truncatula MTR_7g067080 I 0.668
GLYMA11G22960 Glycine max GLYMA11G22960 I 0.667
Gorai.009G093700 Gossypium raimondii Gorai.009G093700 I 0.666
PK27213.1 Cannabis sativa PK27213.1 D 0.666
GSMUA_Achr6G33620_001 Musa acuminata GSMUA_Achr6G33620_001 N 0.665
GSMUA_Achr10G02290_001 Musa acuminata GSMUA_Achr10G02290_001 I 0.664
cassava30173.valid.m1 Manihot esculenta cassava30173.valid.m1 I 0.663
Lus10018209.g Linum usitatissimum Lus10018209.g I 0.663
SapurV1A.0001s0790 Salix purpurea SapurV1A.0001s0790 I 0.663
AT2G38090 Arabidopsis thaliana AT2G38090 D 0.662
Bo3g032160 Brassica oleracea Bo3g032160 I 0.662
Bo4g029810 Brassica oleracea Bo4g029810 I 0.662
Bra000038 Brassica rapa Bra000038 I 0.662
fgenesh2_kg.4__1876__AT2G38090.1 Arabidopsis lyrata fgenesh2_kg.4__1876__AT2G38090.1 I 0.662
Cagra.0090s0025 Capsella grandiflora Cagra.0090s0025 I 0.662
Carubv10023736m.g Capsella rubella Carubv10023736m.g I 0.662
Thhalv10017008m.g Eutrema salsugineum Thhalv10017008m.g I 0.662
GLYMA02G42140 Glycine max GLYMA02G42140 I 0.661
GLYMA07G17660 Glycine max GLYMA07G17660 I 0.661
GLYMA18G42530 Glycine max GLYMA18G42530 I 0.661
PRUPE_ppa009103mg Prunus persica PRUPE_ppa009103mg I 0.661
Pm002536 Prunus mume Pm002536 I 0.661