GSMUA_Achr9G17050_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr9G17050_001 T272671_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB60
M07001_2.00 		Arabidopsis thaliana
HNNHYYCAACYACYWHHNN
NNDDWRGTRGTTGRRDNND		 Dap-seq
OMalley et al.(2016)
MYB60_col 		0.875 0.946
MYB30
M07089_2.00 		Arabidopsis thaliana
NHHHCAACYACYWHH
DDWRGTRGTTGDDDN		 Dap-seq
OMalley et al.(2016)
MYB30_col_a 		0.838 0.892
MYB30
M07090_2.00 		Arabidopsis thaliana
HHHYYHCCAACYAMY
RKTRGTTGGDRRDDD		 Dap-seq
OMalley et al.(2016)
MYB30_colamp_a 		0.838 0.892
MYB94
M02298_2.00 		Arabidopsis thaliana
DACCGGTH
DACCGGTH		 PBM
Weirauch et al.(2014)
pTH7085 		0.823 0.892
MYB94
M07094_2.00 		Arabidopsis thaliana
HHNYHYCAACYACYWHHNN
NNDDWRGTRGTTGRDRNDD		 Dap-seq
OMalley et al.(2016)
MYB94_col_b 		0.823 0.892
MYB96
M07153_2.00 		Arabidopsis thaliana
HHHHHYHHCCAACYAHYWNHN
NDNWRDTRGTTGGDDRDDDDD		 Dap-seq
OMalley et al.(2016)
MYB96_colamp_a 		0.823 0.892
MYB96
M07154_2.00 		Arabidopsis thaliana
YAMCHNCCAMCHAHHHHH
DDDDDTDGKTGGNDGKTR		 Dap-seq
OMalley et al.(2016)
MYB96_col_b 		0.823 0.892
ATY13
M07035_2.00 		Arabidopsis thaliana
HAMCHMCCAMCHAHH
DDTDGKTGGKDGKTD		 Dap-seq
OMalley et al.(2016)
ATY13_col_a 		0.811 0.903
ATY13
M07036_2.00 		Arabidopsis thaliana
HAMCHHCCAACHAHH
DDTDGTTGGDDGKTD		 Dap-seq
OMalley et al.(2016)
ATY13_colamp_a 		0.811 0.903
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr9P17050_001 Myb 14 61
GSMUA_Achr9P17050_001 Myb 67 112

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

313 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R011602 Aptenodytes forsteri Afo_R011602 N
ZBTB46 Anolis carolinensis ENSACAG00000003631 N
ENSAMXG00000017494 Astyanax mexicanus ENSAMXG00000017494 N
ENSAPLG00000014808 Anas platyrhynchos ENSAPLG00000014808 N
ZBTB46 Bos taurus ENSBTAG00000016667 N
ZBTB46 Callithrix jacchus ENSCJAG00000010439 N
ZBTB46 Cavia porcellus ENSCPOG00000002803 N
ENSCSAG00000016647 Chlorocebus sabaeus ENSCSAG00000016647 N
zbtb46 Danio rerio ENSDARG00000078191 N
ENSFALG00000005952 Ficedula albicollis ENSFALG00000005952 N
ZBTB46 Homo sapiens ENSG00000130584 N
ZBTB46 Gallus gallus ENSGALG00000006062 N
ZBTB46 Gorilla gorilla ENSGGOG00000004815 N
ENSLACG00000003648 Latimeria chalumnae ENSLACG00000003648 N
ZBTB46 Loxodonta africana ENSLAFG00000012490 N
ENSMEUG00000015248 Macropus eugenii ENSMEUG00000015248 N
ZBTB46 Meleagris gallopavo ENSMGAG00000006811 N
ZBTB46 Microcebus murinus ENSMICG00000012871 N
ZBTB46 Myotis lucifugus ENSMLUG00000005283 N
ZBTB46 Macaca mulatta ENSMMUG00000020712 N
ZBTB46 Monodelphis domestica ENSMODG00000017020 N
Zbtb46 Mus musculus ENSMUSG00000027583 N
ZBTB46 Ornithorhynchus anatinus ENSOANG00000004930 N
ZBTB46 Oryctolagus cuniculus ENSOCUG00000026351 N
ZBTB46 Otolemur garnettii ENSOGAG00000000852 N
ENSONIG00000017400 Oreochromis niloticus ENSONIG00000017400 N
zbtb46 Oryzias latipes ENSORLG00000009686 N
ENSP00000303102-D1 Bos grunniens ENSP00000303102-D1 N
ENSPANG00000026190 Papio anubis ENSPANG00000026190 N
ENSPFOG00000005845 Poecilia formosa ENSPFOG00000005845 N
ENSPSIG00000015887 Pelodiscus sinensis ENSPSIG00000015887 N
ZBTB46 Pan troglodytes ENSPTRG00000013754 N
Zbtb46 Rattus norvegicus ENSRNOG00000014592 N
ENSSHAG00000017616 Sarcophilus harrisii ENSSHAG00000017616 N
ENSSTOG00000012003 Ictidomys tridecemlineatus ENSSTOG00000012003 N
ENSTGUG00000007131 Taeniopygia guttata ENSTGUG00000007131 N
ENSTNIG00000017877 Tetraodon nigroviridis ENSTNIG00000017877 N
zbtb46 Takifugu rubripes ENSTRUG00000004720 N
Myotis_brandtii_Zbtb46_10023447 Myotis brandtii Myotis_brandtii_Zbtb46_10023447 N
Ogr02171 Ophisaurus gracilis Ogr02171 N
Pvit_01331 Pogona vitticeps Pvit_01331 N
zbtb46 Xenopus tropicalis XB-GENE-5847062 N
zbtb46.S Xenopus laevis XB-GENE-5847067 N
XP_002944155 Xenopus tropicalis XP_002944155 N