GSMUA_Achr9G20620_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr9G20620_001 T272675_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SRM1
M02307_2.00 		Arabidopsis thaliana
NNHNATCNN
NNGATNDNN		 PBM
Weirauch et al.(2014)
pTH7080 		0.729 0.804
SRM1
M07121_2.00 		Arabidopsis thaliana
YCTTATCYWHW
WDWRGATAAGR		 Dap-seq
OMalley et al.(2016)
At5g08520_colamp_a 		0.729 0.804
SRM1
M07122_2.00 		Arabidopsis thaliana
YCTTATCYWHWWH
DWWDWRGATAAGR		 Dap-seq
OMalley et al.(2016)
At5g08520_col_b 		0.729 0.804
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr9P20620_001 Myb 53 102
GSMUA_Achr9P20620_001 Myb 119 164

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA20G01450 Glycine max GLYMA20G01450 I 0.856
GSMUA_Achr1G17730_001 Musa acuminata GSMUA_Achr1G17730_001 I 0.853
GLYMA07G28310 Glycine max GLYMA07G28310 I 0.851
PRUPE_ppa009396mg Prunus persica PRUPE_ppa009396mg I 0.850
Cucsa.280970 Cucumis sativus Cucsa.280970 I 0.845
30131.m007263 Ricinus communis 30131.m007263 I 0.833
SapurV1A.0234s0050 Salix purpurea SapurV1A.0234s0050 I 0.833
VIT_10s0071g00660 Vitis vinifera VIT_10s0071g00660 I 0.832
TCM_007672 Theobroma cacao TCM_007672 I 0.822
cassava18614.valid.m1 Manihot esculenta cassava18614.valid.m1 I 0.822
evm.TU.supercontig_138.5 Carica papaya evm.TU.supercontig_138.5 I 0.822
Gorai.005G212900 Gossypium raimondii Gorai.005G212900 I 0.822
Gorai.008G147400 Gossypium raimondii Gorai.008G147400 I 0.822
Eucgr.G02591 Eucalyptus grandis Eucgr.G02591 I 0.821
Gorai.013G067600 Gossypium raimondii Gorai.013G067600 I 0.813
Pm006046 Prunus mume Pm006046 I 0.812
GSMUA_Achr9G23760_001 Musa acuminata GSMUA_Achr9G23760_001 I 0.811
Lus10013447.g Linum usitatissimum Lus10013447.g I 0.807
PK13672.1 Cannabis sativa PK13672.1 I 0.806
Cla009230 Citrullus lanatus Cla009230 I 0.805
Cucsa.013870 Cucumis sativus Cucsa.013870 I 0.805
SapurV1A.0333s0040 Salix purpurea SapurV1A.0333s0040 I 0.803
GSMUA_Achr10G06880_001 Musa acuminata GSMUA_Achr10G06880_001 N 0.799
Lus10041001.g Linum usitatissimum Lus10041001.g N 0.793
Aquca_035_00057 Aquilegia coerulea Aquca_035_00057 I 0.786
GLYMA08G40020 Glycine max GLYMA08G40020 I 0.785
GLYMA18G18140 Glycine max GLYMA18G18140 I 0.785
Cla020348 Citrullus lanatus Cla020348 I 0.784
Ciclev10032259m.g Citrus clementina Ciclev10032259m.g I 0.784
orange1.1g022439m.g Citrus sinensis orange1.1g022439m.g I 0.784
Gorai.012G135600 Gossypium raimondii Gorai.012G135600 I 0.783
Ca_19000 Cicer arietinum Ca_19000 I 0.776
mgf009460m Mimulus guttatus mgf009460m I 0.758
Eucgr.J00349 Eucalyptus grandis Eucgr.J00349 N 0.758
Pavir.Ga00233 Panicum virgatum Pavir.Ga00233 N 0.756
Pavir.Gb00055 Panicum virgatum Pavir.Gb00055 N 0.756
PGSC0003DMG400025303 Solanum tuberosum PGSC0003DMG400025303 I 0.750
Si022762m.g Setaria italica Si022762m.g N 0.750
GRMZM2G149958 Zea mays GRMZM2G149958 I 0.747
gw1.13.182.1 Physcomitrella patens gw1.13.182.1 N 0.738
Solyc04g008870.2 Solanum lycopersicum Solyc04g008870.2 N 0.735
Sb06g032880 Sorghum bicolor Sb06g032880 N 0.732
SRM1 Arabidopsis thaliana AT5G08520 D 0.729
Thhalv10014203m.g Eutrema salsugineum Thhalv10014203m.g I 0.729
OB04G36550 Oryza brachyantha OB04G36550 N 0.726
fgenesh2_kg.6__825__AT5G08520.1 Arabidopsis lyrata fgenesh2_kg.6__825__AT5G08520.1 I 0.724
Cagra.1365s0066 Capsella grandiflora Cagra.1365s0066 I 0.718
Carubv10001525m.g Capsella rubella Carubv10001525m.g I 0.718
Bostr.13129s0103 Boechera stricta Bostr.13129s0103 I 0.717
gene00786-v1.0-hybrid Fragaria vesca gene00786-v1.0-hybrid N 0.714
e_gw1.256.18.1 Physcomitrella patens e_gw1.256.18.1 N 0.712
PRUPE_ppa010926mg Prunus persica PRUPE_ppa010926mg I 0.699
Pm017050 Prunus mume Pm017050 I 0.699
Ca_05454 Cicer arietinum Ca_05454 I 0.697
SapurV1A.0450s0110 Salix purpurea SapurV1A.0450s0110 I 0.695
SapurV1A.1671s0040 Salix purpurea SapurV1A.1671s0040 I 0.695
AMTR_s00106p00065610 Amborella trichopoda AMTR_s00106p00065610 N 0.694
BGIOSGA014092 Oryza indica BGIOSGA014092 N 0.692
OBART04G29570 Oryza barthii OBART04G29570 N 0.692
ONIVA04G28100 Oryza nivara ONIVA04G28100 N 0.692
ORGLA04G0258700 Oryza glaberrima ORGLA04G0258700 N 0.692
ORUFI04G31270 Oryza rufipogon ORUFI04G31270 N 0.692
OS04G0676700 Oryza sativa OS04G0676700 N 0.692
MTR_1g111830 Medicago truncatula MTR_1g111830 I 0.687
GLYMA10G42450 Glycine max GLYMA10G42450 I 0.686
GLYMA20G24600 Glycine max GLYMA20G24600 I 0.686
cassava42566.valid.m1 Manihot esculenta cassava42566.valid.m1 N 0.683
Aquca_072_00078 Aquilegia coerulea Aquca_072_00078 N 0.683
OMERI04G25000 Oryza meridionalis OMERI04G25000 N 0.682
OPUNC04G27130 Oryza punctata OPUNC04G27130 N 0.682
Bo9g174380 Brassica oleracea Bo9g174380 I 0.681
BRADI5G26110 Brachypodium distachyon BRADI5G26110 N 0.681
30174.m008717 Ricinus communis 30174.m008717 I 0.680
Ciclev10029205m.g Citrus clementina Ciclev10029205m.g N 0.680
orange1.1g026855m.g Citrus sinensis orange1.1g026855m.g N 0.680
Gorai.006G063000 Gossypium raimondii Gorai.006G063000 I 0.675
TCM_041160 Theobroma cacao TCM_041160 I 0.674
MDP0000289018 Malus domestica MDP0000289018 I 0.674
TCM_041362 Theobroma cacao TCM_041362 N 0.671
30055.m001589 Ricinus communis 30055.m001589 I 0.671
Bostr.10199s0068 Boechera stricta Bostr.10199s0068 I 0.671
VIT_06s0080g00790 Vitis vinifera VIT_06s0080g00790 I 0.670
gene23544-v1.0-hybrid Fragaria vesca gene23544-v1.0-hybrid I 0.669
Bo3g004970 Brassica oleracea Bo3g004970 I 0.668
GSMUA_Achr9G21870_001 Musa acuminata GSMUA_Achr9G21870_001 N 0.667
LPERR04G25100 Leersia perrieri LPERR04G25100 N 0.664
mgf016380m Mimulus guttatus mgf016380m N 0.663
OGLUM04G29490 Oryza glumaepatula OGLUM04G29490 N 0.662