CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MLOC_10556
(
Hordeum vulgare
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
MLOC_10556
T274433_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q948S5_TOBAC
M11074_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYBA2_01
0.723
0.842
PC-MYB1
M07110_2.00
Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN
Dap-seq
OMalley et al.(2016)
MYB3R1_col_a
0.716
0.799
PC-MYB1
M07111_2.00
Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH
Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a
0.716
0.799
PK12011.1
M01279_2.00
Cannabis sativa
HAACGGHHNN
NNDDCCGTTD
PBM
Lambert et al.(2019)
pTH11423
0.693
0.842
MYB3R4
M07125_2.00
Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN
Dap-seq
OMalley et al.(2016)
MYB3R4_col_a
0.676
0.763
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_10556.1
Myb
50
96
KGNWTREEDDILSRAVQTYNGKHWKKIAECFPGRTDVQCLHRWQKVL
MLOC_10556.1
Myb
102
148
KGPWSKEEDDIIVEMVKKYGPKKWSTIAQALPGRIGKQCRERWHNHL
MLOC_10556.1
Myb
154
198
KDAWTQEEEITLIHAHRMYGNKWAELTKFLPGRTDNSIKNHWNSS
MLOC_10556.3
Myb
31
75
KDAWTQEEEITLIHAHRMYGNKWAELTKFLPGRTDNSIKNHWNSS
MLOC_10556.4
Myb
50
96
KGNWTREEDDILSRAVQTYNGKHWKKIAECFPGRTDVQCLHRWQKVL
MLOC_10556.4
Myb
102
148
KGPWSKEEDDIIVEMVKKYGPKKWSTIAQALPGRIGKQCRERWHNHL
MLOC_10556.4
Myb
154
198
KDAWTQEEEITLIHAHRMYGNKWAELTKFLPGRTDNSIKNHWNSS
MLOC_10556.5
Myb
50
96
KGNWTREEDDILSRAVQTYNGKHWKKIAECFPGRTDVQCLHRWQKVL
MLOC_10556.5
Myb
102
148
KGPWSKEEDDIIVEMVKKYGPKKWSTIAQALPGRIGKQCRERWHNHL
MLOC_10556.5
Myb
154
198
KDAWTQEEEITLIHAHRMYGNKWAELTKFLPGRTDNSIKNHWNSS
Links
Other
Myb/SANT
family TFs
Other
Hordeum vulgare
TFs
121 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PC-MYB1
Arabidopsis thaliana
AT4G32730
D
0.716
MYB3R4
Arabidopsis thaliana
AT5G11510
D
0.676
Q948S5_TOBAC
Nicotiana tabacum
Q948S5_TOBAC
D
0.723
PK12011.1
Cannabis sativa
PK12011.1
D
0.693
AMTR_s00009p00263240
Amborella trichopoda
AMTR_s00009p00263240
I
0.670
BGIOSGA017917
Oryza indica
BGIOSGA017917
I
0.669
Bo1g010040
Brassica oleracea
Bo1g010040
I
0.685
Bo3g007070
Brassica oleracea
Bo3g007070
I
0.682
Bo3g171130
Brassica oleracea
Bo3g171130
I
0.711
Bo3g179620
Brassica oleracea
Bo3g179620
I
0.682
Bo7g115810
Brassica oleracea
Bo7g115810
I
0.725
Bo9g171130
Brassica oleracea
Bo9g171130
I
0.676
Bra006102
Brassica rapa
Bra006102
I
0.680
Bra008956
Brassica rapa
Bra008956
I
0.676
Bra011376
Brassica rapa
Bra011376
I
0.685
Bra034531
Brassica rapa
Bra034531
I
0.711
Bra037045
Brassica rapa
Bra037045
I
0.696
BRADI2G31887
Brachypodium distachyon
BRADI2G31887
I
0.751
F775_05724
Aegilops tauschii
F775_05724
I
0.843
F775_10106
Aegilops tauschii
F775_10106
I
0.665
MYB3R-4
Arabidopsis lyrata
fgenesh2_kg.6__1121__AT5G11510.1
I
0.676
PC-MYB1
Arabidopsis lyrata
fgenesh2_kg.7__866__AT4G32730.2
I
0.716
GLYMA04G08550
Glycine max
GLYMA04G08550
I
0.705
GLYMA06G08660
Glycine max
GLYMA06G08660
I
0.705
GLYMA14G21523
Glycine max
GLYMA14G21523
I
0.687
GLYMA17G26240
Glycine max
GLYMA17G26240
I
0.682
GSMUA_Achr10G14840_001
Musa acuminata
GSMUA_Achr10G14840_001
I
0.787
GSMUA_Achr2G19890_001
Musa acuminata
GSMUA_Achr2G19890_001
I
0.756
LPERR01G31650
Leersia perrieri
LPERR01G31650
I
0.665
MTR_1g026870
Medicago truncatula
MTR_1g026870
I
0.697
MTR_3g110028
Medicago truncatula
MTR_3g110028
I
0.704
MTR_7g061330
Medicago truncatula
MTR_7g061330
I
0.663
MTR_7g461410
Medicago truncatula
MTR_7g461410
I
0.663
OB01G18340
Oryza brachyantha
OB01G18340
I
0.839
OB12G16480
Oryza brachyantha
OB12G16480
I
0.843
OBART01G08110
Oryza barthii
OBART01G08110
I
0.842
OBART05G19200
Oryza barthii
OBART05G19200
I
0.669
OGLUM01G09290
Oryza glumaepatula
OGLUM01G09290
I
0.842
OGLUM01G40780
Oryza glumaepatula
OGLUM01G40780
I
0.665
OLONG_011886
Oryza longistaminata
OLONG_011886
I
0.842
OMERI01G08160
Oryza meridionalis
OMERI01G08160
I
0.806
ONIVA01G10670
Oryza nivara
ONIVA01G10670
I
0.842
ONIVA05G20060
Oryza nivara
ONIVA05G20060
I
0.669
OPUNC01G07980
Oryza punctata
OPUNC01G07980
I
0.846
OPUNC01G08000
Oryza punctata
OPUNC01G08000
I
0.846
ORGLA01G0073200
Oryza glaberrima
ORGLA01G0073200
I
0.823
ORGLA01G0306500
Oryza glaberrima
ORGLA01G0306500
I
0.665
ORGLA12G0066300
Oryza glaberrima
ORGLA12G0066300
I
0.843
ORUFI05G20390
Oryza rufipogon
ORUFI05G20390
I
0.669
MYB3R-2
Oryza sativa
OS01G0841500
I
0.665
OS12G0238000
Oryza sativa
OS12G0238000
I
0.843
POPTR_0006s08570
Populus trichocarpa
POPTR_0006s08570
I
0.683
POPTR_0006s25840
Populus trichocarpa
POPTR_0006s25840
I
0.721
POPTR_0018s00710
Populus trichocarpa
POPTR_0018s00710
I
0.721
PRUPE_ppa000676mg
Prunus persica
PRUPE_ppa000676mg
I
0.747
Si021484m.g
Setaria italica
Si021484m.g
I
0.676
Solyc08g068320.2
Solanum lycopersicum
Solyc08g068320.2
I
0.714
Solyc11g071300.1
Solanum lycopersicum
Solyc11g071300.1
I
0.662
TCM_047091
Theobroma cacao
TCM_047091
I
0.705
Traes_1AS_61D017632
Triticum aestivum
Traes_1AS_61D017632
I
0.759
Traes_1BS_403DBC53C
Triticum aestivum
Traes_1BS_403DBC53C
I
0.756
Traes_3AL_386795528
Triticum aestivum
Traes_3AL_386795528
I
0.673
Traes_3AS_09025DA2E
Triticum aestivum
Traes_3AS_09025DA2E
I
0.862
TRAES3BF049800070CFD_g
Triticum aestivum
TRAES3BF049800070CFD_g
I
0.862
TRAES3BF104600030CFD_g
Triticum aestivum
TRAES3BF104600030CFD_g
I
0.673
Traes_3DL_6BBC889A1
Triticum aestivum
Traes_3DL_6BBC889A1
I
0.673
TRIUR3_24658
Triticum urartu
TRIUR3_24658
I
0.833
VIT_04s0008g03780
Vitis vinifera
VIT_04s0008g03780
I
0.678
VIT_08s0007g00360
Vitis vinifera
VIT_08s0007g00360
I
0.661
VIT_11s0016g03750
Vitis vinifera
VIT_11s0016g03750
I
0.716
Ca_01884
Cicer arietinum
Ca_01884
I
0.682
Ca_14925
Cicer arietinum
Ca_14925
I
0.703
Cla022565
Citrullus lanatus
Cla022565
I
0.723
Cla023357
Citrullus lanatus
Cla023357
I
0.710
Pm005124
Prunus mume
Pm005124
I
0.738
29794.m003447
Ricinus communis
29794.m003447
I
0.718
Cucsa.161430
Cucumis sativus
Cucsa.161430
I
0.723
Cucsa.311420
Cucumis sativus
Cucsa.311420
I
0.710
mgf008601m
Mimulus guttatus
mgf008601m
I
0.721
Aquca_001_00435
Aquilegia coerulea
Aquca_001_00435
I
0.725
Aquca_013_00366
Aquilegia coerulea
Aquca_013_00366
I
0.673
Bostr.20055s0087
Boechera stricta
Bostr.20055s0087
I
0.676
Bostr.6251s0040
Boechera stricta
Bostr.6251s0040
I
0.665
Bostr.7867s1124
Boechera stricta
Bostr.7867s1124
I
0.716
Ciclev10007316m.g
Citrus clementina
Ciclev10007316m.g
I
0.721
Ciclev10011452m.g
Citrus clementina
Ciclev10011452m.g
I
0.675
Eucgr.C02893
Eucalyptus grandis
Eucgr.C02893
I
0.723
evm.TU.supercontig_78.76
Carica papaya
evm.TU.supercontig_78.76
I
0.738
gene08793-v1.0-hybrid
Fragaria vesca
gene08793-v1.0-hybrid
I
0.729
Gorai.001G028200
Gossypium raimondii
Gorai.001G028200
I
0.675
Gorai.006G172800
Gossypium raimondii
Gorai.006G172800
I
0.671
Gorai.009G051000
Gossypium raimondii
Gorai.009G051000
I
0.702
Gorai.010G110000
Gossypium raimondii
Gorai.010G110000
I
0.704
Lus10022136.g
Linum usitatissimum
Lus10022136.g
I
0.756
Lus10024394.g
Linum usitatissimum
Lus10024394.g
I
0.677
Lus10025351.g
Linum usitatissimum
Lus10025351.g
I
0.677
MDP0000179225
Malus domestica
MDP0000179225
I
0.736
MDP0000295807
Malus domestica
MDP0000295807
I
0.743
orange1.1g009402m.g
Citrus sinensis
orange1.1g009402m.g
I
0.675
Pavir.Ea00087
Panicum virgatum
Pavir.Ea00087
I
0.837
Pavir.Eb00149
Panicum virgatum
Pavir.Eb00149
I
0.837
Pavir.J07395
Panicum virgatum
Pavir.J07395
I
0.790
SapurV1A.0001s1810
Salix purpurea
SapurV1A.0001s1810
I
0.681
SapurV1A.0283s0180
Salix purpurea
SapurV1A.0283s0180
I
0.723
SapurV1A.0446s0220
Salix purpurea
SapurV1A.0446s0220
I
0.692
Thhalv10012583m.g
Eutrema salsugineum
Thhalv10012583m.g
I
0.670
Thhalv10024320m.g
Eutrema salsugineum
Thhalv10024320m.g
I
0.690
PK22174.1
Cannabis sativa
PK22174.1
I
0.684
LjT22I05.60.nd
Lotus japonicus
LjT22I05.60.nd
I
0.723
PDK_20s1371143g001
Phoenix dactylifera
PDK_20s1371143g001
I
0.682
BRADI2G07677
Brachypodium distachyon
BRADI2G07677
N
0.691
BRADI2G23310
Brachypodium distachyon
BRADI2G23310
N
0.698
BRADI2G23320
Brachypodium distachyon
BRADI2G23320
N
0.698
OPUNC12G06560
Oryza punctata
OPUNC12G06560
N
0.697
Sb03g000930
Sorghum bicolor
Sb03g000930
N
0.869
Sb09g007370
Sorghum bicolor
Sb09g007370
N
0.711
Si000349m.g
Setaria italica
Si000349m.g
N
0.869
Si021218m.g
Setaria italica
Si021218m.g
N
0.738
MDP0000288687
Malus domestica
MDP0000288687
N
0.714
PDK_20s1532811g002
Phoenix dactylifera
PDK_20s1532811g002
N
0.760