MLOC_5837 (Hordeum vulgare)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MLOC_5837 T274523_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PHR1
M02329_2.00 		Oryza sativa
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7755 		0.714 0.787
PHL6
M02295_2.00 		Arabidopsis thaliana
NNWKATNCBN
NVGNATMWNN		 PBM
Weirauch et al.(2014)
pTH7071 		0.680 0.723
PHL6
M07083_2.00 		Arabidopsis thaliana
NDGAAAACH
DGTTTTCHN		 Dap-seq
OMalley et al.(2016)
At3g13040_col_b 		0.680 0.723
AT2G20400
M07046_2.00 		Arabidopsis thaliana
NDNNDNHNNVDDDNNNHAWRGMATATTCB
VGAATATKCYWTDNNNHHHBNNDNHNNHN		 Dap-seq
OMalley et al.(2016)
AT2G20400_col_a 		0.677 0.766
AT2G20400
M07047_2.00 		Arabidopsis thaliana
RDRGAATATTCBNWD
HWNVGAATATTCYHY		 Dap-seq
OMalley et al.(2016)
AT2G20400_colamp_a 		0.677 0.766
PHL7
M02292_2.00 		Arabidopsis thaliana
NWGATDCBNN
NNVGHATCWN		 PBM
Weirauch et al.(2014)
pTH7253 		0.661 0.745
PK10342.1
M02351_2.00 		Cannabis sativa
WAGATKCS
SGMATCTW		 PBM
Weirauch et al.(2014)
pTH9489 		0.661 0.745
PHL7
M07040_2.00 		Arabidopsis thaliana
DRNAKATTCBNHNNN
NNNDNVGAATMTNYH		 Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a 		0.661 0.745
PHL7
M07041_2.00 		Arabidopsis thaliana
VGAATATTCBNHH
DDNVGAATATTCB		 Dap-seq
OMalley et al.(2016)
At2g01060_col 		0.661 0.745
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_5837.1 Myb 231 282
MLOC_5837.2 Myb 163 214
MLOC_5837.3 Myb 163 214
MLOC_5837.4 Myb 163 214

Links

Other Myb/SANT family TFs
Other Hordeum vulgare TFs

233 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_05042 Aegilops tauschii F775_05042 I 0.901
F775_09615 Aegilops tauschii F775_09615 I 0.672
F775_09823 Aegilops tauschii F775_09823 I 0.692
F775_26343 Aegilops tauschii F775_26343 I 0.672
F775_29452 Aegilops tauschii F775_29452 I 0.813
AMTR_s00061p00095620 Amborella trichopoda AMTR_s00061p00095620 I 0.661
Aquca_009_00165 Aquilegia coerulea Aquca_009_00165 N 0.662
Aquca_012_00204 Aquilegia coerulea Aquca_012_00204 N 0.662
Aquca_017_00793 Aquilegia coerulea Aquca_017_00793 I 0.714
fgenesh2_kg.5__3__AT2G01060.1 Arabidopsis lyrata fgenesh2_kg.5__3__AT2G01060.1 I 0.661
PHL7 Arabidopsis thaliana AT2G01060 D 0.661
AT2G20400 Arabidopsis thaliana AT2G20400 D 0.677
PHL6 Arabidopsis thaliana AT3G13040 D 0.680
Bostr.7903s0063 Boechera stricta Bostr.7903s0063 I 0.661
BRADI1G28920 Brachypodium distachyon BRADI1G28920 I 0.692
BRADI1G34470 Brachypodium distachyon BRADI1G34470 I 0.764
BRADI1G63530 Brachypodium distachyon BRADI1G63530 I 0.703
BRADI3G03538 Brachypodium distachyon BRADI3G03538 I 0.834
BRADI3G55120 Brachypodium distachyon BRADI3G55120 I 0.686
BRADI5G20520 Brachypodium distachyon BRADI5G20520 I 0.695
BRADI5G25320 Brachypodium distachyon BRADI5G25320 I 0.661
Bo4g025360 Brassica oleracea Bo4g025360 I 0.713
Bo7g077990 Brassica oleracea Bo7g077990 I 0.661
Bra004973 Brassica rapa Bra004973 I 0.713
Bra024909 Brassica rapa Bra024909 I 0.661
PK01823.1 Cannabis sativa PK01823.1 I 0.745
PK10342.1 Cannabis sativa PK10342.1 D 0.661
PK16227.1 Cannabis sativa PK16227.1 I 0.662
Cagra.2315s0003 Capsella grandiflora Cagra.2315s0003 I 0.661
Carubv10017769m.g Capsella rubella Carubv10017769m.g I 0.661
evm.TU.supercontig_10.14 Carica papaya evm.TU.supercontig_10.14 I 0.739
evm.TU.supercontig_27.185 Carica papaya evm.TU.supercontig_27.185 I 0.661
evm.TU.supercontig_87.3 Carica papaya evm.TU.supercontig_87.3 I 0.714
Ca_03781 Cicer arietinum Ca_03781 I 0.662
Ca_07939 Cicer arietinum Ca_07939 I 0.661
Cla003565 Citrullus lanatus Cla003565 I 0.675
Cla014593 Citrullus lanatus Cla014593 I 0.661
Ciclev10011992m.g Citrus clementina Ciclev10011992m.g I 0.686
Ciclev10015893m.g Citrus clementina Ciclev10015893m.g I 0.661
Ciclev10030185m.g Citrus clementina Ciclev10030185m.g I 0.690
orange1.1g011006m.g Citrus sinensis orange1.1g011006m.g I 0.690
orange1.1g017464m.g Citrus sinensis orange1.1g017464m.g I 0.686
orange1.1g020124m.g Citrus sinensis orange1.1g020124m.g I 0.661
Cucsa.027530 Cucumis sativus Cucsa.027530 I 0.675
Cucsa.044390 Cucumis sativus Cucsa.044390 I 0.661
Eucgr.A01323 Eucalyptus grandis Eucgr.A01323 I 0.714
Eucgr.F04055 Eucalyptus grandis Eucgr.F04055 I 0.706
Thhalv10000981m.g Eutrema salsugineum Thhalv10000981m.g I 0.661
gene05518-v1.0-hybrid Fragaria vesca gene05518-v1.0-hybrid I 0.706
gene19867-v1.0-hybrid Fragaria vesca gene19867-v1.0-hybrid I 0.661
GLYMA09G02040 Glycine max GLYMA09G02040 I 0.661
GLYMA15G12940 Glycine max GLYMA15G12940 I 0.661
GLYMA18G43130 Glycine max GLYMA18G43130 I 0.669
GLYMA19G43690 Glycine max GLYMA19G43690 I 0.662
Gorai.009G120900 Gossypium raimondii Gorai.009G120900 I 0.690
Gorai.011G001500 Gossypium raimondii Gorai.011G001500 I 0.739
Gorai.011G291200 Gossypium raimondii Gorai.011G291200 I 0.704
MLOC_14844 Hordeum vulgare MLOC_14844 I 0.672
MLOC_52271 Hordeum vulgare MLOC_52271 I 0.661
MLOC_54829 Hordeum vulgare MLOC_54829 I 0.813
MLOC_5585 Hordeum vulgare MLOC_5585 I 0.672
MLOC_60198 Hordeum vulgare MLOC_60198 I 0.670
MLOC_65279 Hordeum vulgare MLOC_65279 I 0.666
LPERR02G03030 Leersia perrieri LPERR02G03030 I 0.740
LPERR02G23680 Leersia perrieri LPERR02G23680 I 0.672
LPERR02G30520 Leersia perrieri LPERR02G30520 I 0.703
LPERR03G14050 Leersia perrieri LPERR03G14050 I 0.714
LPERR04G19690 Leersia perrieri LPERR04G19690 I 0.672
LPERR07G10540 Leersia perrieri LPERR07G10540 I 0.692
LPERR09G03210 Leersia perrieri LPERR09G03210 I 0.661
Lus10035705.g Linum usitatissimum Lus10035705.g I 0.675
Lus10037296.g Linum usitatissimum Lus10037296.g I 0.669
LjSGA_026114.1 Lotus japonicus LjSGA_026114.1 I 0.662
MDP0000132340 Malus domestica MDP0000132340 I 0.662
MDP0000241055 Malus domestica MDP0000241055 I 0.682
MDP0000323119 Malus domestica MDP0000323119 I 0.661
MDP0000773970 Malus domestica MDP0000773970 I 0.682
cassava13406.valid.m1 Manihot esculenta cassava13406.valid.m1 I 0.661
cassava13407.valid.m1 Manihot esculenta cassava13407.valid.m1 I 0.661
cassava22661.valid.m1 Manihot esculenta cassava22661.valid.m1 I 0.675
cassava35979.valid.m1 Manihot esculenta cassava35979.valid.m1 I 0.675
cassava35980.valid.m1 Manihot esculenta cassava35980.valid.m1 I 0.675
cassava36260.valid.m1 Manihot esculenta cassava36260.valid.m1 I 0.661
cassava36261.valid.m1 Manihot esculenta cassava36261.valid.m1 I 0.661
cassava39270.m1 Manihot esculenta cassava39270.m1 I 0.675
cassava44101.valid.m1 Manihot esculenta cassava44101.valid.m1 I 0.675
MTR_1g080330 Medicago truncatula MTR_1g080330 I 0.662
MTR_2g027860 Medicago truncatula MTR_2g027860 I 0.661
mgf002744m Mimulus guttatus mgf002744m I 0.661
mgf003647m Mimulus guttatus mgf003647m I 0.661
mgf005047m Mimulus guttatus mgf005047m I 0.696
mgf006394m Mimulus guttatus mgf006394m I 0.661
mgf007291m Mimulus guttatus mgf007291m I 0.661
mgf011847m Mimulus guttatus mgf011847m I 0.672
mgf012689m Mimulus guttatus mgf012689m I 0.661
mgf014369m Mimulus guttatus mgf014369m I 0.661
mgf015945m Mimulus guttatus mgf015945m I 0.661
GSMUA_Achr10G23260_001 Musa acuminata GSMUA_Achr10G23260_001 I 0.758
GSMUA_Achr3G28410_001 Musa acuminata GSMUA_Achr3G28410_001 I 0.661
GSMUA_Achr7G15740_001 Musa acuminata GSMUA_Achr7G15740_001 I 0.766
OBART02G03200 Oryza barthii OBART02G03200 I 0.758
OBART02G29100 Oryza barthii OBART02G29100 I 0.672
OBART07G12530 Oryza barthii OBART07G12530 I 0.692
OBART09G04530 Oryza barthii OBART09G04530 I 0.661
OB02G12880 Oryza brachyantha OB02G12880 I 0.758
OB02G36270 Oryza brachyantha OB02G36270 I 0.672
OB02G43730 Oryza brachyantha OB02G43730 I 0.735
OB03G25800 Oryza brachyantha OB03G25800 I 0.714
OB04G30960 Oryza brachyantha OB04G30960 I 0.672
OB06G34350 Oryza brachyantha OB06G34350 I 0.813
OB07G18720 Oryza brachyantha OB07G18720 I 0.692
OB09G12870 Oryza brachyantha OB09G12870 I 0.661
ORGLA02G0030200 Oryza glaberrima ORGLA02G0030200 I 0.758
ORGLA02G0249400 Oryza glaberrima ORGLA02G0249400 I 0.672
ORGLA03G0154000 Oryza glaberrima ORGLA03G0154000 I 0.714
ORGLA06G0222600 Oryza glaberrima ORGLA06G0222600 I 0.813
ORGLA07G0105500 Oryza glaberrima ORGLA07G0105500 I 0.692
ORGLA09G0034900 Oryza glaberrima ORGLA09G0034900 I 0.661
OGLUM02G03100 Oryza glumaepatula OGLUM02G03100 I 0.758
OGLUM02G29720 Oryza glumaepatula OGLUM02G29720 I 0.672
OGLUM07G11980 Oryza glumaepatula OGLUM07G11980 I 0.692
OGLUM09G05280 Oryza glumaepatula OGLUM09G05280 I 0.661
BGIOSGA005373 Oryza indica BGIOSGA005373 I 0.735
PHR3 Oryza indica BGIOSGA007162 I 0.758
BGIOSGA008875 Oryza indica BGIOSGA008875 I 0.672
PHR1 Oryza indica BGIOSGA012553 I 0.714
BGIOSGA023563 Oryza indica BGIOSGA023563 I 0.813
PHR2 Oryza indica BGIOSGA025605 I 0.692
BGIOSGA030474 Oryza indica BGIOSGA030474 I 0.661
OLONG_005622 Oryza longistaminata OLONG_005622 I 0.714
OLONG_010553 Oryza longistaminata OLONG_010553 I 0.735
OLONG_021629 Oryza longistaminata OLONG_021629 I 0.692
OMERI02G03860 Oryza meridionalis OMERI02G03860 I 0.758
OMERI03G14370 Oryza meridionalis OMERI03G14370 I 0.714
OMERI07G09960 Oryza meridionalis OMERI07G09960 I 0.692
ONIVA02G03010 Oryza nivara ONIVA02G03010 I 0.758
ONIVA02G31870 Oryza nivara ONIVA02G31870 I 0.672
ONIVA03G17050 Oryza nivara ONIVA03G17050 I 0.714
ONIVA07G10340 Oryza nivara ONIVA07G10340 I 0.692
ONIVA09G04730 Oryza nivara ONIVA09G04730 I 0.661
OPUNC02G02530 Oryza punctata OPUNC02G02530 I 0.758
OPUNC02G26700 Oryza punctata OPUNC02G26700 I 0.672
OPUNC03G15590 Oryza punctata OPUNC03G15590 I 0.714
OPUNC04G21550 Oryza punctata OPUNC04G21550 I 0.672
OPUNC07G11150 Oryza punctata OPUNC07G11150 I 0.692
OPUNC09G03970 Oryza punctata OPUNC09G03970 I 0.661
ORUFI02G03130 Oryza rufipogon ORUFI02G03130 I 0.758
ORUFI02G30700 Oryza rufipogon ORUFI02G30700 I 0.672
ORUFI02G38560 Oryza rufipogon ORUFI02G38560 I 0.735
ORUFI07G12650 Oryza rufipogon ORUFI07G12650 I 0.692
ORUFI09G05110 Oryza rufipogon ORUFI09G05110 I 0.661
PHR3 Oryza sativa OS02G0139000 I 0.758
OS02G0700300 Oryza sativa OS02G0700300 I 0.672
PHR1 Oryza sativa OS03G0329900 D 0.714
OS06G0703900 Oryza sativa OS06G0703900 I 0.813
PHR2 Oryza sativa OS07G0438800 I 0.692
OS09G0299200 Oryza sativa OS09G0299200 I 0.661
Pavir.Aa00783 Panicum virgatum Pavir.Aa00783 I 0.672
Pavir.Aa03223 Panicum virgatum Pavir.Aa03223 I 0.813
Pavir.Ab02790 Panicum virgatum Pavir.Ab02790 I 0.672
Pavir.Ba02554 Panicum virgatum Pavir.Ba02554 I 0.692
Pavir.Ba02820 Panicum virgatum Pavir.Ba02820 I 0.661
Pavir.Bb01566 Panicum virgatum Pavir.Bb01566 I 0.692
Pavir.Bb01632 Panicum virgatum Pavir.Bb01632 I 0.661
Pavir.Db00228 Panicum virgatum Pavir.Db00228 I 0.813
Pavir.J14911 Panicum virgatum Pavir.J14911 I 0.813
Pavir.J27649 Panicum virgatum Pavir.J27649 I 0.795
PDK_20s1301376g001 Phoenix dactylifera PDK_20s1301376g001 I 0.675
PDK_20s1369041g001 Phoenix dactylifera PDK_20s1369041g001 I 0.661
PDK_20s1523411g004 Phoenix dactylifera PDK_20s1523411g004 I 0.758
POPTR_0006s00290 Populus trichocarpa POPTR_0006s00290 I 0.661
POPTR_0007s15110 Populus trichocarpa POPTR_0007s15110 I 0.724
POPTR_0014s00280 Populus trichocarpa POPTR_0014s00280 I 0.718
POPTR_0016s00310 Populus trichocarpa POPTR_0016s00310 I 0.661
Pm003600 Prunus mume Pm003600 I 0.662
Pm009657 Prunus mume Pm009657 I 0.661
Pm013132 Prunus mume Pm013132 I 0.706
PRUPE_ppa005159mg Prunus persica PRUPE_ppa005159mg I 0.706
PRUPE_ppa005708mg Prunus persica PRUPE_ppa005708mg I 0.662
PRUPE_ppa009121mg Prunus persica PRUPE_ppa009121mg I 0.661
PRUPE_ppa023008mg Prunus persica PRUPE_ppa023008mg I 0.682
29680.m001711 Ricinus communis 29680.m001711 I 0.675
29805.m001544 Ricinus communis 29805.m001544 I 0.661
30169.m006598 Ricinus communis 30169.m006598 I 0.675
SapurV1A.0089s0170 Salix purpurea SapurV1A.0089s0170 I 0.661
SapurV1A.0220s0460 Salix purpurea SapurV1A.0220s0460 I 0.661
SapurV1A.0703s0050 Salix purpurea SapurV1A.0703s0050 I 0.724
Si006354m.g Setaria italica Si006354m.g I 0.813
Si017191m.g Setaria italica Si017191m.g I 0.813
Si018049m.g Setaria italica Si018049m.g I 0.672
Si029945m.g Setaria italica Si029945m.g I 0.692
Si030592m.g Setaria italica Si030592m.g I 0.661
Solyc05g055940.2 Solanum lycopersicum Solyc05g055940.2 I 0.675
Solyc06g008200.2 Solanum lycopersicum Solyc06g008200.2 I 0.714
Solyc09g072830.2 Solanum lycopersicum Solyc09g072830.2 I 0.696
Solyc11g022470.1 Solanum lycopersicum Solyc11g022470.1 I 0.661
Solyc11g067280.1 Solanum lycopersicum Solyc11g067280.1 I 0.661
PGSC0003DMG400007401 Solanum tuberosum PGSC0003DMG400007401 I 0.661
PGSC0003DMG400008786 Solanum tuberosum PGSC0003DMG400008786 I 0.661
PGSC0003DMG400023467 Solanum tuberosum PGSC0003DMG400023467 I 0.675
Sb02g010520 Sorghum bicolor Sb02g010520 I 0.692
Sb02g020700 Sorghum bicolor Sb02g020700 I 0.661
Sb04g003140 Sorghum bicolor Sb04g003140 I 0.712
Sb04g030830 Sorghum bicolor Sb04g030830 I 0.672
Sb10g029200 Sorghum bicolor Sb10g029200 I 0.807
TCM_027630 Theobroma cacao TCM_027630 I 0.690
TCM_030480 Theobroma cacao TCM_030480 I 0.661
TCM_039819 Theobroma cacao TCM_039819 I 0.682
Traes_3AS_6EEB8D2B2 Triticum aestivum Traes_3AS_6EEB8D2B2 I 0.692
TRAES3BF104900050CFD_g Triticum aestivum TRAES3BF104900050CFD_g I 0.692
Traes_4AS_7220D33B3 Triticum aestivum Traes_4AS_7220D33B3 I 0.672
Traes_4DL_2C27C34AF Triticum aestivum Traes_4DL_2C27C34AF I 0.672
Traes_6AL_72D2B7C35 Triticum aestivum Traes_6AL_72D2B7C35 I 0.672
Traes_6AS_DBE4E3146 Triticum aestivum Traes_6AS_DBE4E3146 I 0.886
Traes_6BL_5D8EE6802 Triticum aestivum Traes_6BL_5D8EE6802 I 0.686
Traes_6BS_00D311B94 Triticum aestivum Traes_6BS_00D311B94 I 0.901
Traes_6DL_EAF038D23 Triticum aestivum Traes_6DL_EAF038D23 I 0.672
Traes_6DS_20D189350 Triticum aestivum Traes_6DS_20D189350 I 0.901
Traes_7AL_D45376F32 Triticum aestivum Traes_7AL_D45376F32 I 0.813
Traes_7BL_09DD5A1DC Triticum aestivum Traes_7BL_09DD5A1DC I 0.813
Traes_7DL_090D0E08E Triticum aestivum Traes_7DL_090D0E08E I 0.813
TRIUR3_02291 Triticum urartu TRIUR3_02291 I 0.686
TRIUR3_32904 Triticum urartu TRIUR3_32904 I 0.813
VIT_00s0475g00040 Vitis vinifera VIT_00s0475g00040 I 0.661
VIT_08s0007g06310 Vitis vinifera VIT_08s0007g06310 I 0.662
VIT_09s0054g01620 Vitis vinifera VIT_09s0054g01620 I 0.718
VIT_09s0070g00410 Vitis vinifera VIT_09s0070g00410 I 0.682
GRMZM2G010920 Zea mays GRMZM2G010920 I 0.764
GRMZM2G124495 Zea mays GRMZM2G124495 I 0.661
GRMZM2G162409 Zea mays GRMZM2G162409 I 0.692
GRMZM2G173943 Zea mays GRMZM2G173943 I 0.661
GRMZM2G374986 Zea mays GRMZM2G374986 I 0.672