CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_1g083630
(
Medicago truncatula
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
MTR_1g083630
T274705_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Gam1
M02703_2.00
Hordeum vulgare
NVYAACSGMC
GKCSGTTRBN
SELEX
Mathelier et al.(2014)
MA0034.1
0.665
0.667
Gam1
M11061_2.00
Hordeum vulgare
YAACSRHM
KDYSGTTR
Transfac
Matys et al.(2006)
P$GAMYB_01
0.665
0.667
GAM1_ORYSI
M11055_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GAMYB_Q2
0.665
0.667
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES61430
Myb
14
61
KGAWSLHEDAILKEYVRKYGEGNWDDVKKKTELFRCGKSCRLRWLNHL
AES61430
Myb
67
109
KGSITREEEQKIVELHAKIGPKWSLMVQELPGRTDNEIKNFWN
Links
Other
Myb/SANT
family TFs
Other
Medicago truncatula
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GAM1_ORYSI
Oryza sativa
GAM1_ORYSI
D
0.665
Gam1
Hordeum vulgare
Q96464_HORVU
D
0.665
evm.TU.supercontig_34.210
Carica papaya
evm.TU.supercontig_34.210
I
0.662
Pm016605
Prunus mume
Pm016605
I
0.663
29686.m000890
Ricinus communis
29686.m000890
I
0.663
29785.m000932
Ricinus communis
29785.m000932
I
0.663
29823.m000215
Ricinus communis
29823.m000215
I
0.661
cassava1461.valid.m1
Manihot esculenta
cassava1461.valid.m1
I
0.663
cassava30977.valid.m1
Manihot esculenta
cassava30977.valid.m1
I
0.663
cassava44767.m1
Manihot esculenta
cassava44767.m1
I
0.675
mgf002965m
Mimulus guttatus
mgf002965m
I
0.666
mgf025568m
Mimulus guttatus
mgf025568m
I
0.663
Aquca_014_00928
Aquilegia coerulea
Aquca_014_00928
I
0.684
Ciclev10000756m.g
Citrus clementina
Ciclev10000756m.g
I
0.672
evm.TU.supercontig_33.151
Carica papaya
evm.TU.supercontig_33.151
I
0.663
Ca_25013
Cicer arietinum
Ca_25013
I
0.679
gene00431-v1.0-hybrid
Fragaria vesca
gene00431-v1.0-hybrid
I
0.663
Gorai.006G121900
Gossypium raimondii
Gorai.006G121900
I
0.668
Gorai.009G301100
Gossypium raimondii
Gorai.009G301100
I
0.664
Gorai.010G212500
Gossypium raimondii
Gorai.010G212500
I
0.669
Gorai.012G022000
Gossypium raimondii
Gorai.012G022000
I
0.677
Lus10008685.g
Linum usitatissimum
Lus10008685.g
I
0.663
Lus10026142.g
Linum usitatissimum
Lus10026142.g
I
0.663
orange1.1g011938m.g
Citrus sinensis
orange1.1g011938m.g
I
0.672
Pavir.Ea03206
Panicum virgatum
Pavir.Ea03206
I
0.665
SapurV1A.0537s0200
Salix purpurea
SapurV1A.0537s0200
I
0.663
SapurV1A.1897s0070
Salix purpurea
SapurV1A.1897s0070
I
0.669
SapurV1A.2567s0040
Salix purpurea
SapurV1A.2567s0040
I
0.669
PGSC0003DMG400005918
Solanum tuberosum
PGSC0003DMG400005918
I
0.663
GAM1
Oryza indica
BGIOSGA004670
I
0.665
BRADI2G53010
Brachypodium distachyon
BRADI2G53010
I
0.665
F775_28392
Aegilops tauschii
F775_28392
I
0.665
GRMZM2G139688
Zea mays
GRMZM2G139688
I
0.665
GSMUA_Achr1G17150_001
Musa acuminata
GSMUA_Achr1G17150_001
I
0.668
LPERR05G16930
Leersia perrieri
LPERR05G16930
I
0.665
OB01G43550
Oryza brachyantha
OB01G43550
I
0.665
OBART01G34660
Oryza barthii
OBART01G34660
I
0.665
OGLUM01G20920
Oryza glumaepatula
OGLUM01G20920
I
0.665
OLONG_020610
Oryza longistaminata
OLONG_020610
I
0.665
OMERI01G31990
Oryza meridionalis
OMERI01G31990
I
0.665
GAMYB
Oryza sativa
OS01G0812000
I
0.665
Pm015094
Prunus mume
Pm015094
I
0.661
POPTR_0001s07330
Populus trichocarpa
POPTR_0001s07330
I
0.669
POPTR_0003s18900
Populus trichocarpa
POPTR_0003s18900
I
0.669
PRUPE_ppa003628mg
Prunus persica
PRUPE_ppa003628mg
I
0.663
PRUPE_ppa017451mg
Prunus persica
PRUPE_ppa017451mg
I
0.661
Si000907m.g
Setaria italica
Si000907m.g
I
0.665
Solyc06g073640.2
Solanum lycopersicum
Solyc06g073640.2
I
0.663
TCM_041010
Theobroma cacao
TCM_041010
I
0.663
TCM_044611
Theobroma cacao
TCM_044611
I
0.669
TRAES3BF027700010CFD_g
Triticum aestivum
TRAES3BF027700010CFD_g
I
0.665
TRIUR3_27104
Triticum urartu
TRIUR3_27104
I
0.665
VIT_19s0090g00590
Vitis vinifera
VIT_19s0090g00590
I
0.670
AMTR_s00037p00177500
Amborella trichopoda
AMTR_s00037p00177500
I
0.670