MTR_1g083630 (Medicago truncatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MTR_1g083630 T274705_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gam1
M02703_2.00 		Hordeum vulgare
NVYAACSGMC
GKCSGTTRBN		 SELEX
Mathelier et al.(2014)
MA0034.1 		0.665 0.667
Gam1
M11061_2.00 		Hordeum vulgare
YAACSRHM
KDYSGTTR		 Transfac
Matys et al.(2006)
P$GAMYB_01 		0.665 0.667
GAM1_ORYSI
M11055_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GAMYB_Q2 		0.665 0.667
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES61430 Myb 14 61
AES61430 Myb 67 109

Links

Other Myb/SANT family TFs
Other Medicago truncatula TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_28392 Aegilops tauschii F775_28392 I 0.665
AMTR_s00037p00177500 Amborella trichopoda AMTR_s00037p00177500 I 0.670
Aquca_014_00928 Aquilegia coerulea Aquca_014_00928 I 0.684
BRADI2G53010 Brachypodium distachyon BRADI2G53010 I 0.665
evm.TU.supercontig_33.151 Carica papaya evm.TU.supercontig_33.151 I 0.663
evm.TU.supercontig_34.210 Carica papaya evm.TU.supercontig_34.210 I 0.662
Ca_25013 Cicer arietinum Ca_25013 I 0.679
Ciclev10000756m.g Citrus clementina Ciclev10000756m.g I 0.672
orange1.1g011938m.g Citrus sinensis orange1.1g011938m.g I 0.672
gene00431-v1.0-hybrid Fragaria vesca gene00431-v1.0-hybrid I 0.663
Gorai.012G022000 Gossypium raimondii Gorai.012G022000 I 0.677
Gorai.010G212500 Gossypium raimondii Gorai.010G212500 I 0.669
Gorai.009G301100 Gossypium raimondii Gorai.009G301100 I 0.664
Gorai.006G121900 Gossypium raimondii Gorai.006G121900 I 0.668
Gam1 Hordeum vulgare Q96464_HORVU D 0.665
LPERR05G16930 Leersia perrieri LPERR05G16930 I 0.665
Lus10008685.g Linum usitatissimum Lus10008685.g I 0.663
Lus10026142.g Linum usitatissimum Lus10026142.g I 0.663
cassava1461.valid.m1 Manihot esculenta cassava1461.valid.m1 I 0.663
cassava44767.m1 Manihot esculenta cassava44767.m1 I 0.675
cassava30977.valid.m1 Manihot esculenta cassava30977.valid.m1 I 0.663
mgf025568m Mimulus guttatus mgf025568m I 0.663
mgf002965m Mimulus guttatus mgf002965m I 0.666
GSMUA_Achr1G17150_001 Musa acuminata GSMUA_Achr1G17150_001 I 0.668
OBART01G34660 Oryza barthii OBART01G34660 I 0.665
OB01G43550 Oryza brachyantha OB01G43550 I 0.665
OGLUM01G20920 Oryza glumaepatula OGLUM01G20920 I 0.665
GAM1 Oryza indica BGIOSGA004670 I 0.665
OLONG_020610 Oryza longistaminata OLONG_020610 I 0.665
OMERI01G31990 Oryza meridionalis OMERI01G31990 I 0.665
GAM1_ORYSI Oryza sativa GAM1_ORYSI D 0.665
GAMYB Oryza sativa OS01G0812000 I 0.665
Pavir.Ea03206 Panicum virgatum Pavir.Ea03206 I 0.665
POPTR_0001s07330 Populus trichocarpa POPTR_0001s07330 I 0.669
POPTR_0003s18900 Populus trichocarpa POPTR_0003s18900 I 0.669
Pm016605 Prunus mume Pm016605 I 0.663
Pm015094 Prunus mume Pm015094 I 0.661
PRUPE_ppa003628mg Prunus persica PRUPE_ppa003628mg I 0.663
PRUPE_ppa017451mg Prunus persica PRUPE_ppa017451mg I 0.661
29823.m000215 Ricinus communis 29823.m000215 I 0.661
29785.m000932 Ricinus communis 29785.m000932 I 0.663
29686.m000890 Ricinus communis 29686.m000890 I 0.663
SapurV1A.0537s0200 Salix purpurea SapurV1A.0537s0200 I 0.663
SapurV1A.1897s0070 Salix purpurea SapurV1A.1897s0070 I 0.669
SapurV1A.2567s0040 Salix purpurea SapurV1A.2567s0040 I 0.669
Si000907m.g Setaria italica Si000907m.g I 0.665
Solyc06g073640.2 Solanum lycopersicum Solyc06g073640.2 I 0.663
PGSC0003DMG400005918 Solanum tuberosum PGSC0003DMG400005918 I 0.663
TCM_041010 Theobroma cacao TCM_041010 I 0.663
TCM_044611 Theobroma cacao TCM_044611 I 0.669
TRAES3BF027700010CFD_g Triticum aestivum TRAES3BF027700010CFD_g I 0.665
TRIUR3_27104 Triticum urartu TRIUR3_27104 I 0.665
VIT_19s0090g00590 Vitis vinifera VIT_19s0090g00590 I 0.670
GRMZM2G139688 Zea mays GRMZM2G139688 I 0.665