MTR_3g101290 (Medicago truncatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MTR_3g101290 T274777_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.694 0.785
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.694 0.785
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.694 0.785
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.687 0.763
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.679 0.742
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.668 0.785
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.668 0.785
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.668 0.785
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.668 0.785
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.668 0.785
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES73251 Myb 37 83
AES73251 Myb 89 134

Links

Other Myb/SANT family TFs
Other Medicago truncatula TFs

174 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27798.m000612 Ricinus communis 27798.m000612 I 0.704
29801.m003096 Ricinus communis 29801.m003096 I 0.674
29814.m000736 Ricinus communis 29814.m000736 I 0.661
30170.m013927 Ricinus communis 30170.m013927 I 0.775
AMTR_s00006p00225600 Amborella trichopoda AMTR_s00006p00225600 I 0.675
AMTR_s00007p00169630 Amborella trichopoda AMTR_s00007p00169630 I 0.676
AMTR_s00029p00183640 Amborella trichopoda AMTR_s00029p00183640 I 0.684
Aquca_007_00580 Aquilegia coerulea Aquca_007_00580 I 0.740
AtMYB1 Arabidopsis lyrata scaffold_301043.1 I 0.663
ATMYBR1 Arabidopsis lyrata scaffold_803378.1 I 0.694
BGIOSGA030245 Oryza indica BGIOSGA030245 I 0.696
Bo2g167960 Brassica oleracea Bo2g167960 I 0.685
Bo7g063830 Brassica oleracea Bo7g063830 I 0.694
Bostr.0568s0154 Boechera stricta Bostr.0568s0154 I 0.694
Bra012149 Brassica rapa Bra012149 I 0.694
BRADI3G06470 Brachypodium distachyon BRADI3G06470 I 0.687
BRADI4G08220 Brachypodium distachyon BRADI4G08220 I 0.680
Cagra.0342s0017 Capsella grandiflora Cagra.0342s0017 I 0.694
Carubv10027659m.g Capsella rubella Carubv10027659m.g I 0.694
cassava1242.valid.m1 Manihot esculenta cassava1242.valid.m1 I 0.685
cassava16103.m1 Manihot esculenta cassava16103.m1 I 0.775
cassava41257.m1 Manihot esculenta cassava41257.m1 I 0.685
cassava46434.m1 Manihot esculenta cassava46434.m1 I 0.754
cassava7558.valid.m1 Manihot esculenta cassava7558.valid.m1 I 0.704
cassava8939.m1 Manihot esculenta cassava8939.m1 I 0.683
Ca_01522 Cicer arietinum Ca_01522 I 0.847
chr2.LjT13M01.180.nd Lotus japonicus chr2.LjT13M01.180.nd I 0.709
Ciclev10002239m.g Citrus clementina Ciclev10002239m.g I 0.775
Ciclev10012003m.g Citrus clementina Ciclev10012003m.g I 0.672
Ciclev10029124m.g Citrus clementina Ciclev10029124m.g I 0.668
Ciclev10031463m.g Citrus clementina Ciclev10031463m.g I 0.706
Cla014191 Citrullus lanatus Cla014191 I 0.681
Cla018417 Citrullus lanatus Cla018417 I 0.704
Cla021015 Citrullus lanatus Cla021015 I 0.724
Cla022889 Citrullus lanatus Cla022889 I 0.829
Cucsa.066910 Cucumis sativus Cucsa.066910 I 0.704
Cucsa.102710 Cucumis sativus Cucsa.102710 I 0.681
Cucsa.123440 Cucumis sativus Cucsa.123440 I 0.746
Cucsa.232630 Cucumis sativus Cucsa.232630 I 0.829
Cucsa.352560 Cucumis sativus Cucsa.352560 I 0.671
Eucgr.E02958 Eucalyptus grandis Eucgr.E02958 I 0.683
Eucgr.F00031 Eucalyptus grandis Eucgr.F00031 I 0.689
Eucgr.F02372 Eucalyptus grandis Eucgr.F02372 I 0.698
Eucgr.J00250 Eucalyptus grandis Eucgr.J00250 I 0.671
Eucgr.K03010 Eucalyptus grandis Eucgr.K03010 I 0.662
evm.TU.supercontig_19.238 Carica papaya evm.TU.supercontig_19.238 I 0.685
evm.TU.supercontig_21.145 Carica papaya evm.TU.supercontig_21.145 I 0.680
evm.TU.supercontig_376.4 Carica papaya evm.TU.supercontig_376.4 I 0.784
e_gw1.53.214.1 Physcomitrella patens e_gw1.53.214.1 I 0.670
e_gw1.72.10.1 Physcomitrella patens e_gw1.72.10.1 I 0.670
e_gw1.9.342.1 Physcomitrella patens e_gw1.9.342.1 I 0.708
F3A4.140 Arabidopsis thaliana AT3G50060 D 0.668
gene09039-v1.0-hybrid Fragaria vesca gene09039-v1.0-hybrid I 0.735
gene20888-v1.0-hybrid Fragaria vesca gene20888-v1.0-hybrid I 0.683
GLYMA01G26650 Glycine max GLYMA01G26650 I 0.704
GLYMA02G42030 Glycine max GLYMA02G42030 I 0.670
GLYMA02G43280 Glycine max GLYMA02G43280 I 0.674
GLYMA03G15810 Glycine max GLYMA03G15810 I 0.704
GLYMA04G03910 Glycine max GLYMA04G03910 I 0.817
GLYMA06G04010 Glycine max GLYMA06G04010 I 0.808
GLYMA14G06320 Glycine max GLYMA14G06320 I 0.674
GLYMA14G06870 Glycine max GLYMA14G06870 I 0.705
GLYMA17G36370 Glycine max GLYMA17G36370 I 0.715
Gorai.006G179700 Gossypium raimondii Gorai.006G179700 I 0.707
Gorai.009G208900 Gossypium raimondii Gorai.009G208900 I 0.775
Gorai.009G215900 Gossypium raimondii Gorai.009G215900 I 0.677
Gorai.009G275100 Gossypium raimondii Gorai.009G275100 I 0.743
Gorai.010G016800 Gossypium raimondii Gorai.010G016800 I 0.800
Gorai.011G278500 Gossypium raimondii Gorai.011G278500 I 0.678
Gorai.012G078200 Gossypium raimondii Gorai.012G078200 I 0.664
Gorai.012G149000 Gossypium raimondii Gorai.012G149000 I 0.703
GRMZM2G050550 Zea mays GRMZM2G050550 I 0.700
GRMZM2G087955 Zea mays GRMZM2G087955 I 0.671
GRMZM2G145444 Zea mays GRMZM2G145444 I 0.687
GSMUA_Achr1G26140_001 Musa acuminata GSMUA_Achr1G26140_001 I 0.681
GSMUA_Achr3G13070_001 Musa acuminata GSMUA_Achr3G13070_001 I 0.674
GSMUA_Achr4G20150_001 Musa acuminata GSMUA_Achr4G20150_001 I 0.674
GSMUA_Achr5G28780_001 Musa acuminata GSMUA_Achr5G28780_001 I 0.687
GSMUA_Achr6G33470_001 Musa acuminata GSMUA_Achr6G33470_001 I 0.687
GSMUA_Achr9G22600_001 Musa acuminata GSMUA_Achr9G22600_001 I 0.661
gw1.10.6.1 Physcomitrella patens gw1.10.6.1 I 0.758
LPERR02G05810 Leersia perrieri LPERR02G05810 I 0.687
LPERR09G00910 Leersia perrieri LPERR09G00910 I 0.696
Lus10014103.g Linum usitatissimum Lus10014103.g I 0.665
Lus10021762.g Linum usitatissimum Lus10021762.g I 0.718
Lus10028250.g Linum usitatissimum Lus10028250.g I 0.677
Lus10032764.g Linum usitatissimum Lus10032764.g I 0.731
Lus10040239.g Linum usitatissimum Lus10040239.g I 0.677
MDP0000203733 Malus domestica MDP0000203733 I 0.679
MDP0000284922 Malus domestica MDP0000284922 I 0.668
MDP0000319124 Malus domestica MDP0000319124 I 0.679
MDP0000477900 Malus domestica MDP0000477900 I 0.733
MDP0000478512 Malus domestica MDP0000478512 I 0.682
MDP0000480596 Malus domestica MDP0000480596 I 0.733
MDP0000641708 Malus domestica MDP0000641708 I 0.733
MDP0000784297 Malus domestica MDP0000784297 I 0.733
MDP0000823270 Malus domestica MDP0000823270 I 0.733
MDP0000894463 Malus domestica MDP0000894463 I 0.760
mgf003084m Mimulus guttatus mgf003084m I 0.753
mgf006151m Mimulus guttatus mgf006151m I 0.782
mgf015566m Mimulus guttatus mgf015566m I 0.680
mgf018580m Mimulus guttatus mgf018580m I 0.682
mgf025567m Mimulus guttatus mgf025567m I 0.716
MLOC_64817 Hordeum vulgare MLOC_64817 I 0.696
MLOC_7426 Hordeum vulgare MLOC_7426 I 0.687
MTR_4g019370 Medicago truncatula MTR_4g019370 I 0.734
MTR_5g082910 Medicago truncatula MTR_5g082910 I 0.674
MYB44 Arabidopsis thaliana AT5G67300 D 0.694
OB09G10200 Oryza brachyantha OB09G10200 I 0.696
OBART09G00310 Oryza barthii OBART09G00310 I 0.696
OGLUM02G06640 Oryza glumaepatula OGLUM02G06640 I 0.687
OGLUM09G00340 Oryza glumaepatula OGLUM09G00340 I 0.696
OMERI02G07700 Oryza meridionalis OMERI02G07700 I 0.687
OMERI08G05160 Oryza meridionalis OMERI08G05160 I 0.696
ONIVA02G08210 Oryza nivara ONIVA02G08210 I 0.687
ONIVA09G00250 Oryza nivara ONIVA09G00250 I 0.696
OPUNC02G05820 Oryza punctata OPUNC02G05820 I 0.687
OPUNC06G19910 Oryza punctata OPUNC06G19910 I 0.688
OPUNC12G06260 Oryza punctata OPUNC12G06260 I 0.696
orange1.1g012494m.g Citrus sinensis orange1.1g012494m.g I 0.706
orange1.1g017566m.g Citrus sinensis orange1.1g017566m.g I 0.672
orange1.1g025351m.g Citrus sinensis orange1.1g025351m.g I 0.775
orange1.1g040502m.g Citrus sinensis orange1.1g040502m.g I 0.668
ORGLA02G0061500 Oryza glaberrima ORGLA02G0061500 I 0.687
ORGLA09G0002900 Oryza glaberrima ORGLA09G0002900 I 0.696
ORUFI02G06760 Oryza rufipogon ORUFI02G06760 I 0.687
ORUFI09G00360 Oryza rufipogon ORUFI09G00360 I 0.696
OS02G0187700 Oryza sativa OS02G0187700 D 0.687
OS09G0106700 Oryza sativa OS09G0106700 I 0.696
Pavir.Ab00649 Panicum virgatum Pavir.Ab00649 I 0.687
Pavir.Ba03084 Panicum virgatum Pavir.Ba03084 I 0.700
Pavir.J23512 Panicum virgatum Pavir.J23512 I 0.687
PGSC0003DMG400007994 Solanum tuberosum PGSC0003DMG400007994 I 0.791
PGSC0003DMG400020338 Solanum tuberosum PGSC0003DMG400020338 I 0.704
PGSC0003DMG400027190 Solanum tuberosum PGSC0003DMG400027190 I 0.702
PK01153.1 Cannabis sativa PK01153.1 I 0.664
PK07741.1 Cannabis sativa PK07741.1 D 0.679
PK12959.1 Cannabis sativa PK12959.1 I 0.684
PK16550.1 Cannabis sativa PK16550.1 I 0.704
PK29071.1 Cannabis sativa PK29071.1 I 0.842
Pm002576 Prunus mume Pm002576 I 0.707
Pm005220 Prunus mume Pm005220 I 0.760
Pm018862 Prunus mume Pm018862 I 0.669
POPTR_0002s13030 Populus trichocarpa POPTR_0002s13030 I 0.726
POPTR_0007s10490 Populus trichocarpa POPTR_0007s10490 I 0.699
POPTR_0008s07100 Populus trichocarpa POPTR_0008s07100 I 0.661
POPTR_0014s03440 Populus trichocarpa POPTR_0014s03440 I 0.814
PRUPE_ppa006851mg Prunus persica PRUPE_ppa006851mg I 0.707
PRUPE_ppa010735mg Prunus persica PRUPE_ppa010735mg I 0.760
SapurV1A.0017s0390 Salix purpurea SapurV1A.0017s0390 I 0.755
SapurV1A.0525s0230 Salix purpurea SapurV1A.0525s0230 I 0.834
SapurV1A.0709s0060 Salix purpurea SapurV1A.0709s0060 I 0.663
Sb02g013010 Sorghum bicolor Sb02g013010 I 0.700
Sb04g005940 Sorghum bicolor Sb04g005940 I 0.687
SELMODRAFT_103999 Selaginella moellendorffii SELMODRAFT_103999 I 0.749
SELMODRAFT_113522 Selaginella moellendorffii SELMODRAFT_113522 I 0.698
SELMODRAFT_77255 Selaginella moellendorffii SELMODRAFT_77255 I 0.698
SELMODRAFT_99462 Selaginella moellendorffii SELMODRAFT_99462 I 0.749
Si017917m.g Setaria italica Si017917m.g I 0.687
Si032789m.g Setaria italica Si032789m.g I 0.700
Solyc04g079360.1 Solanum lycopersicum Solyc04g079360.1 I 0.791
Solyc05g052850.2 Solanum lycopersicum Solyc05g052850.2 I 0.677
Solyc09g011780.2 Solanum lycopersicum Solyc09g011780.2 I 0.704
TCM_021796 Theobroma cacao TCM_021796 I 0.707
TCM_033907 Theobroma cacao TCM_033907 I 0.825
TCM_042474 Theobroma cacao TCM_042474 I 0.665
TCM_042629 Theobroma cacao TCM_042629 I 0.678
Thhalv10004676m.g Eutrema salsugineum Thhalv10004676m.g I 0.711
Thhalv10021963m.g Eutrema salsugineum Thhalv10021963m.g I 0.663
Traes_5BL_486D0D865 Triticum aestivum Traes_5BL_486D0D865 I 0.696
Traes_5DL_92CBBE968 Triticum aestivum Traes_5DL_92CBBE968 I 0.696
VIT_03s0180g00210 Vitis vinifera VIT_03s0180g00210 I 0.669
VIT_08s0007g01540 Vitis vinifera VIT_08s0007g01540 I 0.684
VIT_18s0001g11170 Vitis vinifera VIT_18s0001g11170 I 0.780