CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

OB05G12630 *(Oryza brachyantha)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	OB05G12630	T275293_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MYB55 M00876_2.00	Arabidopsis thaliana	ACCWAMCD	HGKTWGGT	PBM Franco-Zorrilla et al.(2014) MYB55	0.856	0.914
MYB55 M07102_2.00	Arabidopsis thaliana	HNNNHBYAMCWAMCD	HGKTWGKTRVDNNND	Dap-seq OMalley et al.(2016) MYB55_colamp_a	0.856	0.914
MYB55 M07103_2.00	Arabidopsis thaliana	NYNYAMCHACCRHH	DDYGGTDGKTRNRN	Dap-seq OMalley et al.(2016) MYB55_col	0.856	0.914
MYB61 M07002_2.00	Arabidopsis thaliana	HNYAMCHACCDNHNH	DNDNHGGTDGKTRND	Dap-seq OMalley et al.(2016) MYB61_col_a	0.820	0.892
MYB61 M07003_2.00	Arabidopsis thaliana	NHNYACCWAMCDH	DHGKTWGGTRNDN	Dap-seq OMalley et al.(2016) MYB61_colamp_a	0.820	0.892
MYB46 M00877_2.00	Arabidopsis thaliana	NAMCNDHHN	NDDHNGKTN	PBM Franco-Zorrilla et al.(2014) MYB46	0.696	0.785
MYB46 M11046_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ATMYB46_Q6	0.696	0.785
AtMYB17 M07099_2.00	Arabidopsis thaliana	YYYACCWACCWHHHH	DDDDWGGTWGGTRRR	Dap-seq OMalley et al.(2016) MYB17_colamp_a	0.686	0.720
MYB83 M01073_2.00	Arabidopsis thaliana	YACCHACC	GGTDGGTR	PBM Sullivan et al.(2014) pTH7140	0.681	0.710
MYB83 M07066_2.00	Arabidopsis thaliana	YCACCAACHNH	DNDGTTGGTGR	Dap-seq OMalley et al.(2016) MYB83_col_a	0.681	0.710
MYB83 M07067_2.00	Arabidopsis thaliana	NCACCWAMCDNHNNN	NNNDNHGKTWGGTGN	Dap-seq OMalley et al.(2016) MYB83_colamp_a	0.681	0.710
MYB92 M07123_2.00	Arabidopsis thaliana	NHHACCTAMY	RKTAGGTDDN	Dap-seq OMalley et al.(2016) MYB92_100ng20cy_b	0.670	0.688
MYB92 M07124_2.00	Arabidopsis thaliana	NNNNWNNYYYACCWAMYHH	DDRKTWGGTRRRNNWNNNN	Dap-seq OMalley et al.(2016) MYB92_colamp_a	0.670	0.688
MYB107 M07061_2.00	Arabidopsis thaliana	NDDWDBBYYACCWAMYHH	DDRKTWGGTRRVVHWHHN	Dap-seq OMalley et al.(2016) MYB107_col_a	0.666	0.710
MYB107 M07062_2.00	Arabidopsis thaliana	WNBYYYACCWAMYH	DRKTWGGTRRRVNW	Dap-seq OMalley et al.(2016) MYB107_colamp_a	0.666	0.710
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
OB05G12630.1	Myb	14	61	KGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYL
OB05G12630.1	Myb	67	112	RGAFSQEEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCI

Links
Other Myb/SANT family TFs
Other *Oryza brachyantha* TFs

891 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
GGTG_06508	Gaeumannomyces graminis	GGTG_06508	N

OB05G12630 (Oryza brachyantha) Myb/SANT

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

891 Related TFs

OB05G12630 **(Oryza brachyantha)
Myb/SANT**