CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB12G16480
(
Oryza brachyantha
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
OB12G16480
T275408_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q948S5_TOBAC
M11074_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYBA2_01
0.771
0.856
PC-MYB1
M07110_2.00
Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN
Dap-seq
OMalley et al.(2016)
MYB3R1_col_a
0.750
0.806
PC-MYB1
M07111_2.00
Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH
Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a
0.750
0.806
PK12011.1
M01279_2.00
Cannabis sativa
HAACGGHHNN
NNDDCCGTTD
PBM
Lambert et al.(2019)
pTH11423
0.726
0.849
MYB3R4
M07125_2.00
Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN
Dap-seq
OMalley et al.(2016)
MYB3R4_col_a
0.712
0.791
MYB3R5
M07116_2.00
Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN
Dap-seq
OMalley et al.(2016)
MYB3R5_col_a
0.675
0.777
Q948S6_TOBAC
M11075_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYBA1_01
0.667
0.770
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB12G16480.1
Myb
55
101
KGNWTPEEDAILSRAVQTYKGKNWKKIAECFPDRTDVQCLHRWQKVL
OB12G16480.1
Myb
107
153
KGPWSKEEDDIIVQMVNKLGPKKWSTIAQALPGRIGKQCRERWHNHL
OB12G16480.1
Myb
159
203
KEAWTQEEEITLIHAHRMYGNKWAELTKFLPGRTDNAIKNHWNSS
Links
Other
Myb/SANT
family TFs
Other
Oryza brachyantha
TFs
154 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29794.m003447
Ricinus communis
29794.m003447
I
0.741
AMTR_s00009p00263240
Amborella trichopoda
AMTR_s00009p00263240
I
0.698
AMTR_s00109p00061950
Amborella trichopoda
AMTR_s00109p00061950
I
0.714
Aquca_001_00435
Aquilegia coerulea
Aquca_001_00435
I
0.776
Aquca_013_00366
Aquilegia coerulea
Aquca_013_00366
I
0.682
ATMYB3R5
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6000124
I
0.675
BGIOSGA017917
Oryza indica
BGIOSGA017917
I
0.703
Bo1g010040
Brassica oleracea
Bo1g010040
I
0.746
Bo3g007070
Brassica oleracea
Bo3g007070
I
0.718
Bo3g171130
Brassica oleracea
Bo3g171130
I
0.745
Bo3g179620
Brassica oleracea
Bo3g179620
I
0.718
Bo7g115810
Brassica oleracea
Bo7g115810
I
0.748
Bo9g171130
Brassica oleracea
Bo9g171130
I
0.712
Bo9g184660
Brassica oleracea
Bo9g184660
I
0.664
Bostr.20055s0087
Boechera stricta
Bostr.20055s0087
I
0.712
Bostr.22252s0130
Boechera stricta
Bostr.22252s0130
I
0.663
Bostr.6251s0040
Boechera stricta
Bostr.6251s0040
I
0.693
Bostr.7867s1124
Boechera stricta
Bostr.7867s1124
I
0.750
Bra006102
Brassica rapa
Bra006102
I
0.716
Bra008956
Brassica rapa
Bra008956
I
0.712
Bra009597
Brassica rapa
Bra009597
I
0.664
Bra011376
Brassica rapa
Bra011376
I
0.746
Bra034531
Brassica rapa
Bra034531
I
0.745
Bra037045
Brassica rapa
Bra037045
I
0.718
BRADI2G07677
Brachypodium distachyon
BRADI2G07677
N
0.715
BRADI2G31887
Brachypodium distachyon
BRADI2G31887
I
0.794
Cagra.0487s0012
Capsella grandiflora
Cagra.0487s0012
I
0.673
Cagra.4093s0003
Capsella grandiflora
Cagra.4093s0003
I
0.694
Cagra.7526s0003
Capsella grandiflora
Cagra.7526s0003
I
0.695
Carubv10000155m.g
Capsella rubella
Carubv10000155m.g
I
0.695
Carubv10000643m.g
Capsella rubella
Carubv10000643m.g
I
0.673
Carubv10004063m.g
Capsella rubella
Carubv10004063m.g
I
0.694
Ca_01884
Cicer arietinum
Ca_01884
I
0.725
Ca_14925
Cicer arietinum
Ca_14925
I
0.763
chr1.CM0147.520.nd
Lotus japonicus
chr1.CM0147.520.nd
I
0.662
Ciclev10007316m.g
Citrus clementina
Ciclev10007316m.g
I
0.782
Ciclev10011452m.g
Citrus clementina
Ciclev10011452m.g
I
0.677
Cla018173
Citrullus lanatus
Cla018173
I
0.681
Cla022565
Citrullus lanatus
Cla022565
I
0.772
Cla023357
Citrullus lanatus
Cla023357
I
0.770
Cucsa.161430
Cucumis sativus
Cucsa.161430
I
0.772
Cucsa.175460
Cucumis sativus
Cucsa.175460
I
0.687
Cucsa.311420
Cucumis sativus
Cucsa.311420
I
0.770
Eucgr.C02893
Eucalyptus grandis
Eucgr.C02893
I
0.772
evm.TU.supercontig_78.76
Carica papaya
evm.TU.supercontig_78.76
I
0.787
e_gw1.120.1.1
Physcomitrella patens
e_gw1.120.1.1
I
0.675
e_gw1.36.4.1
Physcomitrella patens
e_gw1.36.4.1
I
0.681
F775_05724
Aegilops tauschii
F775_05724
I
0.859
F775_10106
Aegilops tauschii
F775_10106
I
0.682
fgenesh1_pg.C_scaffold_3000839
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_3000839
I
0.687
gene08793-v1.0-hybrid
Fragaria vesca
gene08793-v1.0-hybrid
I
0.789
gene18416-v1.0-hybrid
Fragaria vesca
gene18416-v1.0-hybrid
I
0.698
GLYMA04G08550
Glycine max
GLYMA04G08550
I
0.739
GLYMA06G08660
Glycine max
GLYMA06G08660
I
0.739
GLYMA14G21523
Glycine max
GLYMA14G21523
I
0.730
GLYMA17G26240
Glycine max
GLYMA17G26240
I
0.736
Gorai.001G028200
Gossypium raimondii
Gorai.001G028200
I
0.735
Gorai.001G249400
Gossypium raimondii
Gorai.001G249400
I
0.670
Gorai.006G172800
Gossypium raimondii
Gorai.006G172800
I
0.699
Gorai.009G051000
Gossypium raimondii
Gorai.009G051000
I
0.751
Gorai.010G110000
Gossypium raimondii
Gorai.010G110000
I
0.747
GSMUA_Achr10G14840_001
Musa acuminata
GSMUA_Achr10G14840_001
I
0.779
GSMUA_Achr2G19890_001
Musa acuminata
GSMUA_Achr2G19890_001
I
0.811
LjT22I05.60.nd
Lotus japonicus
LjT22I05.60.nd
I
0.784
LPERR01G31650
Leersia perrieri
LPERR01G31650
I
0.663
Lus10022136.g
Linum usitatissimum
Lus10022136.g
I
0.805
Lus10024394.g
Linum usitatissimum
Lus10024394.g
I
0.679
Lus10025351.g
Linum usitatissimum
Lus10025351.g
I
0.679
MDP0000179225
Malus domestica
MDP0000179225
I
0.797
MDP0000219581
Malus domestica
MDP0000219581
I
0.670
MDP0000295807
Malus domestica
MDP0000295807
I
0.777
mgf006384m
Mimulus guttatus
mgf006384m
I
0.685
mgf008601m
Mimulus guttatus
mgf008601m
I
0.769
mgf019610m
Mimulus guttatus
mgf019610m
I
0.664
MLOC_10556
Hordeum vulgare
MLOC_10556
I
0.843
MTR_1g026870
Medicago truncatula
MTR_1g026870
I
0.758
MTR_3g110028
Medicago truncatula
MTR_3g110028
I
0.764
MYB3R-2
Oryza sativa
OS01G0841500
I
0.695
MYB3R-3
Arabidopsis thaliana
AT3G09370
I
0.687
MYB3R-4
Arabidopsis lyrata
fgenesh2_kg.6__1121__AT5G11510.1
I
0.712
MYB3R4
Arabidopsis thaliana
AT5G11510
D
0.712
MYB3R5
Arabidopsis thaliana
AT5G02320
D
0.675
OB01G18340
Oryza brachyantha
OB01G18340
I
0.898
OB01G45570
Oryza brachyantha
OB01G45570
I
0.665
OB05G26770
Oryza brachyantha
OB05G26770
N
0.689
OBART01G08110
Oryza barthii
OBART01G08110
I
0.882
OBART05G19200
Oryza barthii
OBART05G19200
I
0.703
OGLUM01G09290
Oryza glumaepatula
OGLUM01G09290
I
0.882
OGLUM01G40780
Oryza glumaepatula
OGLUM01G40780
I
0.695
OLONG_011886
Oryza longistaminata
OLONG_011886
I
0.882
OMERI01G08160
Oryza meridionalis
OMERI01G08160
I
0.840
ONIVA01G10670
Oryza nivara
ONIVA01G10670
I
0.882
ONIVA05G20060
Oryza nivara
ONIVA05G20060
I
0.703
OPUNC01G07980
Oryza punctata
OPUNC01G07980
I
0.886
OPUNC01G08000
Oryza punctata
OPUNC01G08000
I
0.886
OPUNC05G16800
Oryza punctata
OPUNC05G16800
I
0.689
OPUNC12G06560
Oryza punctata
OPUNC12G06560
N
0.759
orange1.1g009402m.g
Citrus sinensis
orange1.1g009402m.g
I
0.677
ORGLA01G0073200
Oryza glaberrima
ORGLA01G0073200
I
0.852
ORGLA01G0306500
Oryza glaberrima
ORGLA01G0306500
I
0.695
ORGLA05G0166300
Oryza glaberrima
ORGLA05G0166300
I
0.681
ORGLA12G0066300
Oryza glaberrima
ORGLA12G0066300
I
0.909
ORUFI01G08920
Oryza rufipogon
ORUFI01G08920
N
0.669
ORUFI05G20390
Oryza rufipogon
ORUFI05G20390
I
0.703
OS05G0459000
Oryza sativa
OS05G0459000
I
0.681
OS12G0238000
Oryza sativa
OS12G0238000
I
0.903
Pavir.Ea00087
Panicum virgatum
Pavir.Ea00087
I
0.903
Pavir.Ea03349
Panicum virgatum
Pavir.Ea03349
I
0.694
Pavir.Eb00149
Panicum virgatum
Pavir.Eb00149
I
0.903
Pavir.Eb03676
Panicum virgatum
Pavir.Eb03676
I
0.694
Pavir.J07395
Panicum virgatum
Pavir.J07395
I
0.826
PC-MYB1
Arabidopsis thaliana
AT4G32730
D
0.750
PC-MYB1
Arabidopsis lyrata
fgenesh2_kg.7__866__AT4G32730.2
I
0.750
PDK_20s1371143g001
Phoenix dactylifera
PDK_20s1371143g001
I
0.691
PGSC0003DMG400018588
Solanum tuberosum
PGSC0003DMG400018588
I
0.671
PK12011.1
Cannabis sativa
PK12011.1
D
0.726
PK22174.1
Cannabis sativa
PK22174.1
I
0.733
Pm002704
Prunus mume
Pm002704
I
0.670
Pm005124
Prunus mume
Pm005124
I
0.787
Pm018007
Prunus mume
Pm018007
I
0.679
POPTR_0006s08570
Populus trichocarpa
POPTR_0006s08570
I
0.685
POPTR_0006s25840
Populus trichocarpa
POPTR_0006s25840
I
0.770
POPTR_0018s00710
Populus trichocarpa
POPTR_0018s00710
I
0.770
PRUPE_ppa000676mg
Prunus persica
PRUPE_ppa000676mg
I
0.807
PRUPE_ppa003208mg
Prunus persica
PRUPE_ppa003208mg
I
0.670
PRUPE_ppa022218mg
Prunus persica
PRUPE_ppa022218mg
I
0.679
Q948S5_TOBAC
Nicotiana tabacum
Q948S5_TOBAC
D
0.771
Q948S6_TOBAC
Nicotiana tabacum
Q948S6_TOBAC
D
0.667
SapurV1A.0001s1810
Salix purpurea
SapurV1A.0001s1810
I
0.683
SapurV1A.0283s0180
Salix purpurea
SapurV1A.0283s0180
I
0.772
SapurV1A.0446s0220
Salix purpurea
SapurV1A.0446s0220
I
0.741
Sb03g039470
Sorghum bicolor
Sb03g039470
I
0.668
Sb09g007370
Sorghum bicolor
Sb09g007370
N
0.744
Si000842m.g
Setaria italica
Si000842m.g
I
0.694
Si021484m.g
Setaria italica
Si021484m.g
I
0.698
Solyc08g068320.2
Solanum lycopersicum
Solyc08g068320.2
I
0.769
Solyc11g071300.1
Solanum lycopersicum
Solyc11g071300.1
I
0.690
TCM_047091
Theobroma cacao
TCM_047091
I
0.754
Thhalv10012583m.g
Eutrema salsugineum
Thhalv10012583m.g
I
0.705
Thhalv10013211m.g
Eutrema salsugineum
Thhalv10013211m.g
I
0.671
Thhalv10024320m.g
Eutrema salsugineum
Thhalv10024320m.g
I
0.712
TRAES3BF049800070CFD_g
Triticum aestivum
TRAES3BF049800070CFD_g
I
0.890
TRAES3BF104600030CFD_g
Triticum aestivum
TRAES3BF104600030CFD_g
I
0.663
Traes_1AS_61D017632
Triticum aestivum
Traes_1AS_61D017632
I
0.802
Traes_1BL_C25B5DDB4
Triticum aestivum
Traes_1BL_C25B5DDB4
I
0.677
Traes_1BS_403DBC53C
Triticum aestivum
Traes_1BS_403DBC53C
I
0.799
Traes_1DL_B26A733D4
Triticum aestivum
Traes_1DL_B26A733D4
I
0.675
Traes_3AL_386795528
Triticum aestivum
Traes_3AL_386795528
I
0.663
Traes_3AS_09025DA2E
Triticum aestivum
Traes_3AS_09025DA2E
I
0.890
Traes_3DL_6BBC889A1
Triticum aestivum
Traes_3DL_6BBC889A1
I
0.663
TRIUR3_24658
Triticum urartu
TRIUR3_24658
I
0.861
TRIUR3_29290
Triticum urartu
TRIUR3_29290
I
0.683
VIT_04s0008g03780
Vitis vinifera
VIT_04s0008g03780
I
0.727
VIT_11s0016g03750
Vitis vinifera
VIT_11s0016g03750
I
0.765