CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

OS04G0461000 *(Oryza sativa)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	OS04G0461000	T277174_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MYB106 M11040_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$AT3G01140_01	0.810	0.946
MYB107 M07061_2.00	Arabidopsis thaliana	NDDWDBBYYACCWAMYHH	DDRKTWGGTRRVVHWHHN	Dap-seq OMalley et al.(2016) MYB107_col_a	0.728	0.774
MYB107 M07062_2.00	Arabidopsis thaliana	WNBYYYACCWAMYH	DRKTWGGTRRRVNW	Dap-seq OMalley et al.(2016) MYB107_colamp_a	0.728	0.774
AtMYB93 M07020_2.00	Arabidopsis thaliana	HDNYYYAMCWAMYHHHHHHHH	DDDDDDDDRKTWGKTRRRNHD	Dap-seq OMalley et al.(2016) MYB93_col_a	0.705	0.785
AtMYB93 M07021_2.00	Arabidopsis thaliana	NNHNBYYYAMCWAMY	RKTWGKTRRRVNDNN	Dap-seq OMalley et al.(2016) MYB93_colamp_a	0.705	0.785
MYB49 M07140_2.00	Arabidopsis thaliana	HDBBYYACCWAMYWH	DWRKTWGGTRRVVHD	Dap-seq OMalley et al.(2016) MYB49_col_a	0.704	0.806
MYB49 M07141_2.00	Arabidopsis thaliana	NYYYACCTAMYWHN	NDWRKTAGGTRRRN	Dap-seq OMalley et al.(2016) MYB49_colamp_a	0.704	0.806
MYB55 M00876_2.00	Arabidopsis thaliana	ACCWAMCD	HGKTWGGT	PBM Franco-Zorrilla et al.(2014) MYB55	0.690	0.720
MYB55 M07102_2.00	Arabidopsis thaliana	HNNNHBYAMCWAMCD	HGKTWGKTRVDNNND	Dap-seq OMalley et al.(2016) MYB55_colamp_a	0.690	0.720
MYB55 M07103_2.00	Arabidopsis thaliana	NYNYAMCHACCRHH	DDYGGTDGKTRNRN	Dap-seq OMalley et al.(2016) MYB55_col	0.690	0.720
MYB92 M07123_2.00	Arabidopsis thaliana	NHHACCTAMY	RKTAGGTDDN	Dap-seq OMalley et al.(2016) MYB92_100ng20cy_b	0.688	0.720
MYB92 M07124_2.00	Arabidopsis thaliana	NNNNWNNYYYACCWAMYHH	DDRKTWGGTRRRNNWNNNN	Dap-seq OMalley et al.(2016) MYB92_colamp_a	0.688	0.720
MYB39 M07106_2.00	Arabidopsis thaliana	NYYYACCTAMYWHH	DDWRKTAGGTRRRN	Dap-seq OMalley et al.(2016) MYB39_col_a	0.688	0.763
MYB39 M07107_2.00	Arabidopsis thaliana	NYYYACCWAMYWHHHHHHHNH	DNDDDDDDDWRKTWGGTRRRN	Dap-seq OMalley et al.(2016) MYB39_colamp_a	0.688	0.763
MYB43 M07127_2.00	Arabidopsis thaliana	NYYYACCWAMYWH	DWRKTWGGTRRRN	Dap-seq OMalley et al.(2016) MYB43_col_a	0.673	0.699
ATMYB13 M06999_2.00	Arabidopsis thaliana	HYCACCWACCHHHNH	DNDDDGGTWGGTGRD	Dap-seq OMalley et al.(2016) MYB13_col_a	0.666	0.710
ATMYB13 M07000_2.00	Arabidopsis thaliana	BYCACCWACCHHHNNHNN	NNDNNDDDGGTWGGTGRV	Dap-seq OMalley et al.(2016) MYB13_colamp_a	0.666	0.710
PK28187.1 M01286_2.00	Cannabis sativa	TACCTACC	GGTAGGTA	PBM Lambert et al.(2019) pTH11305	0.662	0.785
AtMYB74 M07104_2.00	Arabidopsis thaliana	NYYYACCTAMYWHH	DDWRKTAGGTRRRN	Dap-seq OMalley et al.(2016) MYB74_colamp_a	0.662	0.774
AtMYB74 M07105_2.00	Arabidopsis thaliana	BYHYACCTAMYHHH	DDDRKTAGGTRDRV	Dap-seq OMalley et al.(2016) MYB74_col	0.662	0.774
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
OS04T0461000-01	Myb	14	61	KGPWTPEEDQKLLAYIEQHGHGCWRSLPSKAGLQRCGKSCRLRWTNYL
OS04T0461000-01	Myb	67	112	RGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHL

Links
Other Myb/SANT family TFs
Other *Oryza sativa* TFs

871 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ENSAMEG00000001783	Ailuropoda melanoleuca	ENSAMEG00000001783	N
ZBTB46	Equus caballus	ENSECAG00000021082	N
ZBTB46	Felis catus	ENSFCAG00000001175	N
ENSMPUG00000008570	Mustela putorius furo	ENSMPUG00000008570	N
ENSNLEG00000010171	Nomascus leucogenys	ENSNLEG00000010171	N
ENSOPRG00000002439	Ochotona princeps	ENSOPRG00000002439	N
ENSOARG00000009948	Ovis aries	ENSOARG00000009948	N
ENSPPYG00000011247	Pongo abelii	ENSPPYG00000011247	N
ZBTB46	Procavia capensis	ENSPCAG00000002007	N
ENSTGUG00000018263	Taeniopygia guttata	ENSTGUG00000018263	N
ENSTSYG00000010671	Tarsius syrichta	ENSTSYG00000010671	N
ZBTB46	Tursiops truncatus	ENSTTRG00000012229	N
Tal_R008960	Tyto alba	Tal_R008960	N

OS04G0461000 (Oryza sativa) Myb/SANT

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

871 Related TFs

OS04G0461000 **(Oryza sativa)
Myb/SANT**