PGSC0003DMG400013508 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG400013508 T277602_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KUA1
M02312_2.00 		Arabidopsis thaliana
NNTTATCCDN
NHGGATAANN		 PBM
Weirauch et al.(2014)
pTH7647 		0.668 0.723
KUA1
M07136_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWW
WWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
At5g47390_colamp_a 		0.668 0.723
KUA1
M07137_2.00 		Arabidopsis thaliana
HHWDYHTTATCCAHW
WDTGGATAADRHWDD		 Dap-seq
OMalley et al.(2016)
At5g47390_col_b 		0.668 0.723
fgenesh1_pg.scaffold_70000111
M02342_2.00 		Physcomitrella patens
NNHNATCBN
NVGATNDNN		 PBM
Weirauch et al.(2014)
pTH8492 		0.668 0.702
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400035143 Myb 94 141

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

156 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr5G09240_001 Musa acuminata GSMUA_Achr5G09240_001 I 0.717
Solyc09g007570.1 Solanum lycopersicum Solyc09g007570.1 N 0.717
cassava18869.valid.m1 Manihot esculenta cassava18869.valid.m1 I 0.691
BGIOSGA002215 Oryza indica BGIOSGA002215 I 0.686
BRADI2G05760 Brachypodium distachyon BRADI2G05760 I 0.686
F775_13323 Aegilops tauschii F775_13323 I 0.686
GRMZM2G049695 Zea mays GRMZM2G049695 I 0.686
LPERR01G05630 Leersia perrieri LPERR01G05630 I 0.686
LPERR05G05230 Leersia perrieri LPERR05G05230 I 0.686
MLOC_70777 Hordeum vulgare MLOC_70777 I 0.686
OB01G15870 Oryza brachyantha OB01G15870 I 0.686
OBART01G05900 Oryza barthii OBART01G05900 I 0.686
OBART05G06190 Oryza barthii OBART05G06190 I 0.686
OGLUM01G06460 Oryza glumaepatula OGLUM01G06460 I 0.686
OGLUM05G06460 Oryza glumaepatula OGLUM05G06460 I 0.686
OLONG_008716 Oryza longistaminata OLONG_008716 I 0.686
OLONG_014842 Oryza longistaminata OLONG_014842 I 0.686
OMERI01G06100 Oryza meridionalis OMERI01G06100 I 0.686
OMERI05G05690 Oryza meridionalis OMERI05G05690 I 0.686
ONIVA01G06840 Oryza nivara ONIVA01G06840 I 0.686
ONIVA05G06820 Oryza nivara ONIVA05G06820 I 0.686
OPUNC01G05740 Oryza punctata OPUNC01G05740 I 0.686
OPUNC05G05650 Oryza punctata OPUNC05G05650 I 0.686
ORGLA01G0055800 Oryza glaberrima ORGLA01G0055800 I 0.686
ORGLA05G0055700 Oryza glaberrima ORGLA05G0055700 I 0.686
ORUFI01G06450 Oryza rufipogon ORUFI01G06450 I 0.686
OS01G0192300 Oryza sativa OS01G0192300 I 0.686
Sb03g003100 Sorghum bicolor Sb03g003100 I 0.686
Si002353m.g Setaria italica Si002353m.g I 0.686
Si022796m.g Setaria italica Si022796m.g I 0.686
Traes_3AS_4DF357170 Triticum aestivum Traes_3AS_4DF357170 I 0.686
TRAES3BF096900180CFD_g Triticum aestivum TRAES3BF096900180CFD_g I 0.686
TRIUR3_35146 Triticum urartu TRIUR3_35146 I 0.686
Pavir.Ca00821 Panicum virgatum Pavir.Ca00821 I 0.686
Pavir.Ea00361 Panicum virgatum Pavir.Ea00361 I 0.686
Pavir.J19866 Panicum virgatum Pavir.J19866 I 0.686
PDK_20s1503511g002 Phoenix dactylifera PDK_20s1503511g002 I 0.686
OB05G15660 Oryza brachyantha OB05G15660 I 0.678
BGIOSGA003931 Oryza indica BGIOSGA003931 I 0.675
BGIOSGA017461 Oryza indica BGIOSGA017461 I 0.675
F775_32973 Aegilops tauschii F775_32973 I 0.675
GRMZM2G071977 Zea mays GRMZM2G071977 I 0.675
LPERR01G18690 Leersia perrieri LPERR01G18690 I 0.675
LPERR05G23440 Leersia perrieri LPERR05G23440 I 0.675
MLOC_7981 Hordeum vulgare MLOC_7981 I 0.675
OB01G31400 Oryza brachyantha OB01G31400 I 0.675
OB05G35300 Oryza brachyantha OB05G35300 I 0.675
OBART01G21920 Oryza barthii OBART01G21920 I 0.675
OBART05G27750 Oryza barthii OBART05G27750 I 0.675
OGLUM01G25620 Oryza glumaepatula OGLUM01G25620 I 0.675
OGLUM05G29240 Oryza glumaepatula OGLUM05G29240 I 0.675
OLONG_007893 Oryza longistaminata OLONG_007893 I 0.675
OMERI01G20200 Oryza meridionalis OMERI01G20200 I 0.675
OMERI05G23670 Oryza meridionalis OMERI05G23670 I 0.675
ONIVA01G25110 Oryza nivara ONIVA01G25110 I 0.675
ONIVA05G29740 Oryza nivara ONIVA05G29740 I 0.675
OPUNC01G22110 Oryza punctata OPUNC01G22110 I 0.675
OPUNC05G25370 Oryza punctata OPUNC05G25370 I 0.675
OPUNC05G25400 Oryza punctata OPUNC05G25400 I 0.675
ORGLA01G0174500 Oryza glaberrima ORGLA01G0174500 I 0.675
ORGLA05G0241200 Oryza glaberrima ORGLA05G0241200 I 0.675
ORUFI01G24630 Oryza rufipogon ORUFI01G24630 I 0.675
ORUFI05G29720 Oryza rufipogon ORUFI05G29720 I 0.675
OS01G0603300 Oryza sativa OS01G0603300 I 0.675
OS05G0589400 Oryza sativa OS05G0589400 I 0.675
Sb03g027120 Sorghum bicolor Sb03g027120 I 0.675
Si002334m.g Setaria italica Si002334m.g I 0.675
Traes_3AL_55A3F252C Triticum aestivum Traes_3AL_55A3F252C I 0.675
TRAES3BF053400010CFD_g Triticum aestivum TRAES3BF053400010CFD_g I 0.675
Traes_3DL_F1DB969A8 Triticum aestivum Traes_3DL_F1DB969A8 I 0.675
estExt_fgenesh1_pg.C_60110 Micromonas pusilla estExt_fgenesh1_pg.C_60110 I 0.675
Eucgr.C00908 Eucalyptus grandis Eucgr.C00908 I 0.675
EuGene.0300010169 Micromonas sp RCC299 EuGene.0300010169 I 0.675
Pavir.Ea02123 Panicum virgatum Pavir.Ea02123 I 0.675
cassava4591.m1 Manihot esculenta cassava4591.m1 I 0.670
AMTR_s00074p00097250 Amborella trichopoda AMTR_s00074p00097250 I 0.668
AT1G70000 Arabidopsis thaliana AT1G70000 I 0.668
KUA1 Arabidopsis thaliana AT5G47390 D 0.668
BGIOSGA018651 Oryza indica BGIOSGA018651 I 0.668
Bo1g051550 Brassica oleracea Bo1g051550 I 0.668
Bo2g066810 Brassica oleracea Bo2g066810 I 0.668
Bo2g132340 Brassica oleracea Bo2g132340 I 0.668
Bo6g094990 Brassica oleracea Bo6g094990 I 0.668
Bo7g105100 Brassica oleracea Bo7g105100 I 0.668
Bra003969 Brassica rapa Bra003969 I 0.668
Bra007892 Brassica rapa Bra007892 I 0.668
Bra012665 Brassica rapa Bra012665 I 0.668
Bra022127 Brassica rapa Bra022127 I 0.668
Bra026253 Brassica rapa Bra026253 I 0.668
fgenesh2_kg.2__1257__AT1G70000.1 Arabidopsis lyrata fgenesh2_kg.2__1257__AT1G70000.1 I 0.668
GLYMA01G04530 Glycine max GLYMA01G04530 I 0.668
GLYMA02G03020 Glycine max GLYMA02G03020 I 0.668
GLYMA05G36290 Glycine max GLYMA05G36290 I 0.668
GLYMA08G03330 Glycine max GLYMA08G03330 I 0.668
GLYMA08G40460 Glycine max GLYMA08G40460 I 0.668
GSMUA_Achr11G00670_001 Musa acuminata GSMUA_Achr11G00670_001 I 0.668
MTR_6g092540 Medicago truncatula MTR_6g092540 I 0.668
ORUFI05G06600 Oryza rufipogon ORUFI05G06600 I 0.668
OS05G0195700 Oryza sativa OS05G0195700 I 0.668
PGSC0003DMG400000340 Solanum tuberosum PGSC0003DMG400000340 I 0.668
POPTR_0006s15480 Populus trichocarpa POPTR_0006s15480 I 0.668
PRUPE_ppa008425mg Prunus persica PRUPE_ppa008425mg I 0.668
scaffold_800056.1 Arabidopsis lyrata scaffold_800056.1 I 0.668
Solyc12g008800.1 Solanum lycopersicum Solyc12g008800.1 I 0.668
TCM_010118 Theobroma cacao TCM_010118 I 0.668
TCM_037276 Theobroma cacao TCM_037276 I 0.668
TCM_037687 Theobroma cacao TCM_037687 I 0.668
VIT_01s0026g01050 Vitis vinifera VIT_01s0026g01050 I 0.668
VIT_11s0016g02410 Vitis vinifera VIT_11s0016g02410 I 0.668
Ca_05889 Cicer arietinum Ca_05889 I 0.668
Ca_15538 Cicer arietinum Ca_15538 I 0.668
Cla000916 Citrullus lanatus Cla000916 I 0.668
Pm027228 Prunus mume Pm027228 I 0.668
29736.m002089 Ricinus communis 29736.m002089 I 0.668
cassava22868.valid.m1 Manihot esculenta cassava22868.valid.m1 I 0.668
cassava29981.valid.m1 Manihot esculenta cassava29981.valid.m1 I 0.668
cassava43855.valid.m1 Manihot esculenta cassava43855.valid.m1 I 0.668
Cucsa.361050 Cucumis sativus Cucsa.361050 I 0.668
e_gw1.89.66.1 Physcomitrella patens e_gw1.89.66.1 I 0.668
estExt_fgenesh1_pg.C_1880060 Physcomitrella patens estExt_fgenesh1_pg.C_1880060 I 0.668
fgenesh1_pg.scaffold_66000046 Physcomitrella patens fgenesh1_pg.scaffold_66000046 I 0.668
fgenesh1_pg.scaffold_66000048 Physcomitrella patens fgenesh1_pg.scaffold_66000048 I 0.668
fgenesh1_pg.scaffold_70000111 Physcomitrella patens fgenesh1_pg.scaffold_70000111 D 0.668
mgf011892m Mimulus guttatus mgf011892m I 0.668
Aquca_002_00384 Aquilegia coerulea Aquca_002_00384 I 0.668
Aquca_025_00167 Aquilegia coerulea Aquca_025_00167 I 0.668
Bostr.10273s0355 Boechera stricta Bostr.10273s0355 I 0.668
Bostr.14419s0032 Boechera stricta Bostr.14419s0032 I 0.668
Cagra.10840s0008 Capsella grandiflora Cagra.10840s0008 I 0.668
Cagra.1415s0002 Capsella grandiflora Cagra.1415s0002 I 0.668
Carubv10020813m.g Capsella rubella Carubv10020813m.g I 0.668
Carubv10026634m.g Capsella rubella Carubv10026634m.g I 0.668
Ciclev10032167m.g Citrus clementina Ciclev10032167m.g I 0.668
Eucgr.B02575 Eucalyptus grandis Eucgr.B02575 I 0.668
Eucgr.C03658 Eucalyptus grandis Eucgr.C03658 I 0.668
Eucgr.K02897 Eucalyptus grandis Eucgr.K02897 I 0.668
gene11419-v1.0-hybrid Fragaria vesca gene11419-v1.0-hybrid I 0.668
Gorai.007G378300 Gossypium raimondii Gorai.007G378300 I 0.668
Gorai.010G081800 Gossypium raimondii Gorai.010G081800 I 0.668
Lus10013289.g Linum usitatissimum Lus10013289.g I 0.668
Lus10027781.g Linum usitatissimum Lus10027781.g I 0.668
Lus10030813.g Linum usitatissimum Lus10030813.g I 0.668
MDP0000537549 Malus domestica MDP0000537549 I 0.668
MDP0000875621 Malus domestica MDP0000875621 I 0.668
orange1.1g021351m.g Citrus sinensis orange1.1g021351m.g I 0.668
SapurV1A.0161s0200 Salix purpurea SapurV1A.0161s0200 I 0.668
SapurV1A.1274s0030 Salix purpurea SapurV1A.1274s0030 I 0.668
Thhalv10000932m.g Eutrema salsugineum Thhalv10000932m.g I 0.668
Thhalv10019007m.g Eutrema salsugineum Thhalv10019007m.g I 0.668
Thhalv10025432m.g Eutrema salsugineum Thhalv10025432m.g I 0.668
PK11714.1 Cannabis sativa PK11714.1 I 0.668
chr2.CM0373.230.nd Lotus japonicus chr2.CM0373.230.nd I 0.668
GLYMA14G10740 Glycine max GLYMA14G10740 I 0.667
POPTR_0015s08020 Populus trichocarpa POPTR_0015s08020 I 0.666
GRMZM2G065829 Zea mays GRMZM2G065829 I 0.665
BRADI2G42870 Brachypodium distachyon BRADI2G42870 I 0.664