CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400024217
(
Solanum tuberosum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
PGSC0003DMG400024217
T277670_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
APRR2
M02300_2.00
Arabidopsis thaliana
NNRNWATCNN
NNGATWNYNN
PBM
Weirauch et al.(2014)
pTH7102
0.793
0.915
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400062232
Myb
318
368
KVDWTPELHKKFVQAVEQLGIDQAIPSRILDLMKVEGLTRHNVASHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Solanum tuberosum
TFs
74 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AC217910.3_FG006
Zea mays
AC217910.3_FG006
N
GRMZM2G095982
Zea mays
GRMZM2G095982
N
Sb07g019940
Sorghum bicolor
Sb07g019940
N
Si015783m.g
Setaria italica
Si015783m.g
N
Pavir.Fb01201
Panicum virgatum
Pavir.Fb01201
N