PGSC0003DMG400037038 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG400037038 T277741_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB61
M07002_2.00 		Arabidopsis thaliana
HNYAMCHACCDNHNH
DNDNHGGTDGKTRND		 Dap-seq
OMalley et al.(2016)
MYB61_col_a 		0.777 0.804
MYB61
M07003_2.00 		Arabidopsis thaliana
NHNYACCWAMCDH
DHGKTWGGTRNDN		 Dap-seq
OMalley et al.(2016)
MYB61_colamp_a 		0.777 0.804
MYB55
M00876_2.00 		Arabidopsis thaliana
ACCWAMCD
HGKTWGGT		 PBM
Franco-Zorrilla et al.(2014)
MYB55 		0.731 0.793
MYB55
M07102_2.00 		Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND		 Dap-seq
OMalley et al.(2016)
MYB55_colamp_a 		0.731 0.793
MYB55
M07103_2.00 		Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN		 Dap-seq
OMalley et al.(2016)
MYB55_col 		0.731 0.793
ATY53
M07078_2.00 		Arabidopsis thaliana
YBYACCWAMCDHHNNNNNNNN
NNNNNNNNDDHGKTWGGTRVR		 Dap-seq
OMalley et al.(2016)
MYB67_col_a 		0.727 0.815
MYB83
M01073_2.00 		Arabidopsis thaliana
YACCHACC
GGTDGGTR		 PBM
Sullivan et al.(2014)
pTH7140 		0.726 0.728
MYB83
M07066_2.00 		Arabidopsis thaliana
YCACCAACHNH
DNDGTTGGTGR		 Dap-seq
OMalley et al.(2016)
MYB83_col_a 		0.726 0.728
MYB83
M07067_2.00 		Arabidopsis thaliana
NCACCWAMCDNHNNN
NNNDNHGKTWGGTGN		 Dap-seq
OMalley et al.(2016)
MYB83_colamp_a 		0.726 0.728
MYB46
M00877_2.00 		Arabidopsis thaliana
NAMCNDHHN
NDDHNGKTN		 PBM
Franco-Zorrilla et al.(2014)
MYB46 		0.690 0.739
MYB46
M11046_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB46_Q6 		0.690 0.739
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400087467 Myb 14 61
PGSC0003DMT400087467 Myb 67 111

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

686 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRIVIDRAFT_30358 Trichoderma virens TRIVIDRAFT_30358 I
MGU_09467 Metarhizium guizhouense MGU_09467 N
e_gw1.43.159.1 Nectria haematococca e_gw1.43.159.1 N
X797_002485 Metarhizium robertsii X797_002485 N
UV8b_2110 Ustilaginoidea virens UV8b_2110 N
TRIREDRAFT_53067 Trichoderma reesei TRIREDRAFT_53067 N
TRIATDRAFT_214226 Trichoderma atroviride TRIATDRAFT_214226 N
SAPIO_CDS9353 Scedosporium apiospermum SAPIO_CDS9353 N
S40288_02302 Stachybotrys chartarum S40288_02302 N
S40285_07528 Stachybotrys chlorohalonata S40285_07528 N
PFICI_14032 Pestalotiopsis fici PFICI_14032 N
NechaG49678 Fusarium solani NechaG49678 N
BBA_00886 Beauveria bassiana BBA_00886 N
MANI_022807 Metarhizium anisopliae MANI_022807 N
MAM_07435 Metarhizium album MAM_07435 N
MAJ_05893 Metarhizium majus MAJ_05893 N
MAC_05468 Metarhizium acridum MAC_05468 N
GLRG_11832 Colletotrichum graminicola GLRG_11832 N
FVEG_03514 Fusarium verticillioides FVEG_03514 N
FPSE_04048 Fusarium pseudograminearum FPSE_04048 N
FOXG_05661 Fusarium oxysporum FOXG_05661 N
FGRRES_16424 Fusarium graminearum FGRRES_16424 N
FFUJ_03786 Fusarium fujikuroi FFUJ_03786 N
CCM_02835 Cordyceps militaris CCM_02835 N