CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0002s15900
(
Populus trichocarpa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
POPTR_0002s15900
T278221_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0002s15900.1
Myb
14
61
KGPWTPEEDDLLVTYIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNYL
POPTR_0002s15900.1
Myb
67
87
RGPFTLEEEKLVIQLHGILGN
Links
Other
Myb/SANT
family TFs
Other
Populus trichocarpa
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G111045
Zea mays
GRMZM2G111045
I
0.808
SELMODRAFT_39454
Selaginella moellendorffii
SELMODRAFT_39454
I
0.668
SELMODRAFT_39481
Selaginella moellendorffii
SELMODRAFT_39481
I
0.668
SELMODRAFT_89380
Selaginella moellendorffii
SELMODRAFT_89380
N
0.694
PDK_20s1698071g001
Phoenix dactylifera
PDK_20s1698071g001
N
0.780
SapurV1A.0553s0120
Salix purpurea
SapurV1A.0553s0120
N
0.687
evm.TU.supercontig_43.122
Carica papaya
evm.TU.supercontig_43.122
N
0.738
evm.TU.supercontig_1993.2
Carica papaya
evm.TU.supercontig_1993.2
N
0.706
mgf004018m
Mimulus guttatus
mgf004018m
N
0.694
e_gw1.389.24.1
Physcomitrella patens
e_gw1.389.24.1
N
0.673
e_gw1.2.476.1
Physcomitrella patens
e_gw1.2.476.1
N
0.749
e_gw1.1.456.1
Physcomitrella patens
e_gw1.1.456.1
N
0.743
30027.m000837
Ricinus communis
30027.m000837
N
0.664
Ca_16645
Cicer arietinum
Ca_16645
N
0.720
Ca_06925
Cicer arietinum
Ca_06925
N
0.678
TRIUR3_30803
Triticum urartu
TRIUR3_30803
N
0.743
Traes_2BL_216652F6B
Triticum aestivum
Traes_2BL_216652F6B
N
0.669
SELMODRAFT_90153
Selaginella moellendorffii
SELMODRAFT_90153
N
0.713
AMTR_s00009p00257990
Amborella trichopoda
AMTR_s00009p00257990
N
0.684
SELMODRAFT_84608
Selaginella moellendorffii
SELMODRAFT_84608
N
0.694
SELMODRAFT_78848
Selaginella moellendorffii
SELMODRAFT_78848
N
0.728
SELMODRAFT_78303
Selaginella moellendorffii
SELMODRAFT_78303
N
0.728
SELMODRAFT_39516
Selaginella moellendorffii
SELMODRAFT_39516
N
0.672
SELMODRAFT_39507
Selaginella moellendorffii
SELMODRAFT_39507
N
0.672
SELMODRAFT_39499
Selaginella moellendorffii
SELMODRAFT_39499
N
0.677
SELMODRAFT_39496
Selaginella moellendorffii
SELMODRAFT_39496
N
0.677
OS08G0433400
Oryza sativa
OS08G0433400
N
0.733
OLONG_015294
Oryza longistaminata
OLONG_015294
N
0.670
GLYMA05G17994
Glycine max
GLYMA05G17994
N
0.711