Sb03g010980 (Sorghum bicolor)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Sb03g010980 T279174_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB56
M07130_2.00 		Arabidopsis thaliana
DDHNHTAACKGWHWH
DWDWCMGTTADNDHH		 Dap-seq
OMalley et al.(2016)
MYB56_col_a 		0.664 0.710
MYB56
M07131_2.00 		Arabidopsis thaliana
DNNHTAACGGWHWHD
HDWDWCCGTTADNNH		 Dap-seq
OMalley et al.(2016)
MYB56_colamp_a 		0.664 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb03g010980.1 Myb 57 103
Sb03g010980.1 Myb 109 154

Links

Other Myb/SANT family TFs
Other Sorghum bicolor TFs

147 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G460869 Zea mays GRMZM2G460869 I 0.748
Eucgr.K01542 Eucalyptus grandis Eucgr.K01542 I 0.719
OGLUM01G12520 Oryza glumaepatula OGLUM01G12520 I 0.704
OMERI01G10960 Oryza meridionalis OMERI01G10960 I 0.704
ONIVA01G13400 Oryza nivara ONIVA01G13400 I 0.704
OPUNC01G10870 Oryza punctata OPUNC01G10870 I 0.704
ORUFI01G12050 Oryza rufipogon ORUFI01G12050 I 0.704
OS01G0274800 Oryza sativa OS01G0274800 I 0.704
PGSC0003DMG400028119 Solanum tuberosum PGSC0003DMG400028119 I 0.703
Solyc10g081320.1 Solanum lycopersicum Solyc10g081320.1 I 0.703
LPERR01G10360 Leersia perrieri LPERR01G10360 I 0.700
GRMZM2G111731 Zea mays GRMZM2G111731 I 0.698
GRMZM2G312419 Zea mays GRMZM2G312419 I 0.698
Sb03g010960 Sorghum bicolor Sb03g010960 I 0.698
Pavir.Ea01097 Panicum virgatum Pavir.Ea01097 I 0.698
GSMUA_Achr10G12830_001 Musa acuminata GSMUA_Achr10G12830_001 I 0.697
GSMUA_Achr9G04990_001 Musa acuminata GSMUA_Achr9G04990_001 I 0.697
Si004691m.g Setaria italica Si004691m.g I 0.697
Si005038m.g Setaria italica Si005038m.g I 0.697
GRMZM5G803355 Zea mays GRMZM5G803355 I 0.696
Pavir.Cb01957 Panicum virgatum Pavir.Cb01957 I 0.696
AMTR_s00010p00264600 Amborella trichopoda AMTR_s00010p00264600 I 0.694
GLYMA01G05980 Glycine max GLYMA01G05980 I 0.694
GLYMA02G12105 Glycine max GLYMA02G12105 I 0.694
GLYMA07G35581 Glycine max GLYMA07G35581 I 0.694
GLYMA20G04511 Glycine max GLYMA20G04511 I 0.694
MTR_4g082040 Medicago truncatula MTR_4g082040 I 0.694
MTR_5g041570 Medicago truncatula MTR_5g041570 I 0.694
PGSC0003DMG400018427 Solanum tuberosum PGSC0003DMG400018427 I 0.694
Si011791m.g Setaria italica Si011791m.g I 0.694
Solyc05g007870.1 Solanum lycopersicum Solyc05g007870.1 I 0.694
TCM_011689 Theobroma cacao TCM_011689 I 0.694
VIT_01s0026g02600 Vitis vinifera VIT_01s0026g02600 I 0.694
Ca_16374 Cicer arietinum Ca_16374 I 0.694
29813.m001506 Ricinus communis 29813.m001506 I 0.694
cassava12017.valid.m1 Manihot esculenta cassava12017.valid.m1 I 0.694
cassava17309.m1 Manihot esculenta cassava17309.m1 I 0.694
mgf001214m Mimulus guttatus mgf001214m I 0.694
Ciclev10031944m.g Citrus clementina Ciclev10031944m.g I 0.694
Eucgr.G02492 Eucalyptus grandis Eucgr.G02492 I 0.694
evm.TU.supercontig_1.43 Carica papaya evm.TU.supercontig_1.43 I 0.694
Gorai.005G142000 Gossypium raimondii Gorai.005G142000 I 0.694
Gorai.013G086400 Gossypium raimondii Gorai.013G086400 I 0.694
Lus10026611.g Linum usitatissimum Lus10026611.g I 0.694
Lus10030452.g Linum usitatissimum Lus10030452.g I 0.694
MDP0000136541 Malus domestica MDP0000136541 I 0.694
MDP0000146675 Malus domestica MDP0000146675 I 0.694
MDP0000181178 Malus domestica MDP0000181178 I 0.694
MDP0000232291 Malus domestica MDP0000232291 I 0.694
orange1.1g046309m.g Citrus sinensis orange1.1g046309m.g I 0.694
SapurV1A.0149s0020 Salix purpurea SapurV1A.0149s0020 I 0.694
PK20989.1 Cannabis sativa PK20989.1 I 0.694
chr2.CM0641.440.nd Lotus japonicus chr2.CM0641.440.nd I 0.694
BGIOSGA013471 Oryza indica BGIOSGA013471 I 0.693
BGIOSGA013472 Oryza indica BGIOSGA013472 I 0.693
LPERR03G26860 Leersia perrieri LPERR03G26860 I 0.693
OB03G39280 Oryza brachyantha OB03G39280 I 0.693
OBART03G32240 Oryza barthii OBART03G32240 I 0.693
OGLUM02G34940 Oryza glumaepatula OGLUM02G34940 I 0.693
OLONG_009506 Oryza longistaminata OLONG_009506 I 0.693
OMERI03G28940 Oryza meridionalis OMERI03G28940 I 0.693
ONIVA03G33740 Oryza nivara ONIVA03G33740 I 0.693
OPUNC03G29370 Oryza punctata OPUNC03G29370 I 0.693
ORGLA03G0409400 Oryza glaberrima ORGLA03G0409400 I 0.693
ORUFI03G33630 Oryza rufipogon ORUFI03G33630 I 0.693
OS03G0720800 Oryza sativa OS03G0720800 I 0.693
GSMUA_Achr10G05080_001 Musa acuminata GSMUA_Achr10G05080_001 I 0.692
VIT_14s0108g01010 Vitis vinifera VIT_14s0108g01010 I 0.691
Cla010359 Citrullus lanatus Cla010359 I 0.691
Cucsa.284980 Cucumis sativus Cucsa.284980 I 0.691
Pavir.Hb01200 Panicum virgatum Pavir.Hb01200 I 0.691
TCM_033560 Theobroma cacao TCM_033560 I 0.690
AMTR_s00119p00105590 Amborella trichopoda AMTR_s00119p00105590 I 0.688
POPTR_0013s06320 Populus trichocarpa POPTR_0013s06320 I 0.688
Sb03g010970 Sorghum bicolor Sb03g010970 I 0.688
cassava25953.m1 Manihot esculenta cassava25953.m1 I 0.688
Ciclev10020631m.g Citrus clementina Ciclev10020631m.g I 0.688
evm.TU.supercontig_73.4 Carica papaya evm.TU.supercontig_73.4 I 0.688
Pavir.J21755 Panicum virgatum Pavir.J21755 I 0.688
SapurV1A.1664s0020 Salix purpurea SapurV1A.1664s0020 I 0.688
SapurV1A.3733s0010 Salix purpurea SapurV1A.3733s0010 I 0.688
PK28773.1 Cannabis sativa PK28773.1 I 0.688
PRUPE_ppa025260mg Prunus persica PRUPE_ppa025260mg I 0.685
Pm006483 Prunus mume Pm006483 I 0.685
Cla000326 Citrullus lanatus Cla000326 I 0.684
Gorai.006G015200 Gossypium raimondii Gorai.006G015200 I 0.684
POPTR_0019s05740 Populus trichocarpa POPTR_0019s05740 I 0.683
Ciclev10011967m.g Citrus clementina Ciclev10011967m.g I 0.683
orange1.1g047550m.g Citrus sinensis orange1.1g047550m.g I 0.683
BGIOSGA001907 Oryza indica BGIOSGA001907 I 0.681
Aquca_053_00075 Aquilegia coerulea Aquca_053_00075 I 0.680
Pavir.J16832 Panicum virgatum Pavir.J16832 I 0.680
SapurV1A.1416s0010 Salix purpurea SapurV1A.1416s0010 I 0.679
SapurV1A.1660s0020 Salix purpurea SapurV1A.1660s0020 I 0.679
GSMUA_Achr6G02580_001 Musa acuminata GSMUA_Achr6G02580_001 I 0.678
SELMODRAFT_6282 Selaginella moellendorffii SELMODRAFT_6282 I 0.678
SELMODRAFT_6284 Selaginella moellendorffii SELMODRAFT_6284 I 0.678
Pavir.J31094 Panicum virgatum Pavir.J31094 I 0.678
GSMUA_Achr6G32250_001 Musa acuminata GSMUA_Achr6G32250_001 I 0.677
Sb08g005290 Sorghum bicolor Sb08g005290 I 0.676
Ciclev10023285m.g Citrus clementina Ciclev10023285m.g I 0.675
Gorai.007G002200 Gossypium raimondii Gorai.007G002200 I 0.675
Cucsa.189540 Cucumis sativus Cucsa.189540 I 0.674
Aquca_002_00639 Aquilegia coerulea Aquca_002_00639 I 0.674
GRMZM2G083239 Zea mays GRMZM2G083239 I 0.673
GLYMA03G00980 Glycine max GLYMA03G00980 I 0.672
POPTR_0010s17470 Populus trichocarpa POPTR_0010s17470 I 0.672
Sb05g009460 Sorghum bicolor Sb05g009460 I 0.672
SELMODRAFT_127613 Selaginella moellendorffii SELMODRAFT_127613 I 0.672
SELMODRAFT_80553 Selaginella moellendorffii SELMODRAFT_80553 I 0.672
Ca_08179 Cicer arietinum Ca_08179 I 0.672
GSMUA_Achr11G10490_001 Musa acuminata GSMUA_Achr11G10490_001 I 0.671
MLOC_71066 Hordeum vulgare MLOC_71066 I 0.671
SELMODRAFT_6091 Selaginella moellendorffii SELMODRAFT_6091 I 0.671
SELMODRAFT_6100 Selaginella moellendorffii SELMODRAFT_6100 I 0.671
TRAES3BF063000030CFD_g Triticum aestivum TRAES3BF063000030CFD_g I 0.671
Lus10005683.g Linum usitatissimum Lus10005683.g I 0.670
AtMYB56 Arabidopsis lyrata fgenesh2_kg.6__1780__AT5G17800.1 I 0.669
POPTR_0008s08760 Populus trichocarpa POPTR_0008s08760 I 0.669
Bostr.26527s0427 Boechera stricta Bostr.26527s0427 I 0.669
Thhalv10014113m.g Eutrema salsugineum Thhalv10014113m.g I 0.669
PRUPE_ppa006434mg Prunus persica PRUPE_ppa006434mg I 0.668
Si026751m.g Setaria italica Si026751m.g I 0.668
Cla017770 Citrullus lanatus Cla017770 I 0.668
Pm025457 Prunus mume Pm025457 I 0.668
Cucsa.337000 Cucumis sativus Cucsa.337000 I 0.668
gene29254-v1.0-hybrid Fragaria vesca gene29254-v1.0-hybrid I 0.668
MDP0000755899 Malus domestica MDP0000755899 I 0.668
Pavir.J04678 Panicum virgatum Pavir.J04678 I 0.668
Bo3g012780 Brassica oleracea Bo3g012780 I 0.667
Bra006422 Brassica rapa Bra006422 I 0.667
Eucgr.K02297 Eucalyptus grandis Eucgr.K02297 I 0.666
MDP0000172476 Malus domestica MDP0000172476 I 0.666
MDP0000878006 Malus domestica MDP0000878006 I 0.666
PDK_20s1649141g001 Phoenix dactylifera PDK_20s1649141g001 I 0.666
cassava3020.m1 Manihot esculenta cassava3020.m1 I 0.665
mgf021119m Mimulus guttatus mgf021119m I 0.665
MYB56 Arabidopsis thaliana AT5G17800 D 0.664
ATMYB69 Vitis vinifera VIT_04s0044g01380 I 0.664
BRADI1G10470 Brachypodium distachyon BRADI1G10470 I 0.663
GSMUA_Achr7G21740_001 Musa acuminata GSMUA_Achr7G21740_001 I 0.663
GSMUA_Achr9G29090_001 Musa acuminata GSMUA_Achr9G29090_001 I 0.663
30000.m000380 Ricinus communis 30000.m000380 I 0.663
cassava45348.m1 Manihot esculenta cassava45348.m1 I 0.663
Gorai.007G346400 Gossypium raimondii Gorai.007G346400 I 0.663
MTR_7g086960 Medicago truncatula MTR_7g086960 I 0.662
28838.m000246 Ricinus communis 28838.m000246 I 0.661