Sb09g016570 (Sorghum bicolor)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Sb09g016570 T279311_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.667 0.763
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.667 0.763
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.667 0.763
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.661 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb09g016570.1 Myb 32 78
Sb09g016570.1 Myb 84 129

Links

Other Myb/SANT family TFs
Other Sorghum bicolor TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J33236 Panicum virgatum Pavir.J33236 I 0.878
Si024344m.g Setaria italica Si024344m.g I 0.862
AC213884.3_FG002 Zea mays AC213884.3_FG002 N 0.853
BRADI2G28910 Brachypodium distachyon BRADI2G28910 N 0.787
OGLUM05G13590 Oryza glumaepatula OGLUM05G13590 I 0.764
OMERI05G11510 Oryza meridionalis OMERI05G11510 I 0.764
ONIVA05G13470 Oryza nivara ONIVA05G13470 I 0.764
OPUNC05G11020 Oryza punctata OPUNC05G11020 I 0.764
ORGLA05G0109400 Oryza glaberrima ORGLA05G0109400 I 0.764
ORUFI05G13850 Oryza rufipogon ORUFI05G13850 I 0.764
MLOC_26177 Hordeum vulgare MLOC_26177 N 0.762
BGIOSGA018239 Oryza indica BGIOSGA018239 I 0.752
BGIOSGA018238 Oryza indica BGIOSGA018238 I 0.743
LPERR05G10150 Leersia perrieri LPERR05G10150 I 0.731
TCM_007138 Theobroma cacao TCM_007138 I 0.721
MTR_4g094982 Medicago truncatula MTR_4g094982 I 0.710
mgf023922m Mimulus guttatus mgf023922m I 0.705
Aquca_083_00054 Aquilegia coerulea Aquca_083_00054 I 0.696
Gorai.002G009300 Gossypium raimondii Gorai.002G009300 I 0.696
TCM_042474 Theobroma cacao TCM_042474 I 0.694
VIT_13s0067g01360 Vitis vinifera VIT_13s0067g01360 I 0.690
29814.m000736 Ricinus communis 29814.m000736 I 0.686
mgf014089m Mimulus guttatus mgf014089m I 0.686
Bo2g167960 Brassica oleracea Bo2g167960 I 0.685
GSMUA_Achr3G13070_001 Musa acuminata GSMUA_Achr3G13070_001 I 0.684
TCM_000696 Theobroma cacao TCM_000696 I 0.683
Gorai.007G055600 Gossypium raimondii Gorai.007G055600 I 0.683
Lus10007503.g Linum usitatissimum Lus10007503.g I 0.681
GLYMA05G21220 Glycine max GLYMA05G21220 I 0.680
POPTR_0005s18620 Populus trichocarpa POPTR_0005s18620 I 0.680
Cla004431 Citrullus lanatus Cla004431 I 0.680
CM0528.210.nd Lotus japonicus CM0528.210.nd I 0.680
Thhalv10025742m.g Eutrema salsugineum Thhalv10025742m.g I 0.678
PGSC0003DMG400003316 Solanum tuberosum PGSC0003DMG400003316 I 0.676
Solyc04g078420.1 Solanum lycopersicum Solyc04g078420.1 I 0.676
GSMUA_Achr4G20150_001 Musa acuminata GSMUA_Achr4G20150_001 I 0.675
PGSC0003DMG400024983 Solanum tuberosum PGSC0003DMG400024983 I 0.674
Solyc02g092930.1 Solanum lycopersicum Solyc02g092930.1 I 0.674
Gorai.007G218100 Gossypium raimondii Gorai.007G218100 I 0.674
Bo3g153550 Brassica oleracea Bo3g153550 I 0.672
GRMZM2G093647 Zea mays GRMZM2G093647 N 0.671
GSMUA_Achr1G26140_001 Musa acuminata GSMUA_Achr1G26140_001 I 0.670
AMTR_s00006p00225600 Amborella trichopoda AMTR_s00006p00225600 I 0.669
Bo7g118450 Brassica oleracea Bo7g118450 I 0.668
Gorai.012G149000 Gossypium raimondii Gorai.012G149000 I 0.668
MYB44 Arabidopsis thaliana AT5G67300 D 0.667
Bo7g063830 Brassica oleracea Bo7g063830 I 0.667
Bra012149 Brassica rapa Bra012149 I 0.667
GSMUA_Achr3G28230_001 Musa acuminata GSMUA_Achr3G28230_001 I 0.667
ATMYBR1 Arabidopsis lyrata scaffold_803378.1 I 0.667
Bostr.0568s0154 Boechera stricta Bostr.0568s0154 I 0.667
Cagra.0342s0017 Capsella grandiflora Cagra.0342s0017 I 0.667
Carubv10027659m.g Capsella rubella Carubv10027659m.g I 0.667
Thhalv10004676m.g Eutrema salsugineum Thhalv10004676m.g I 0.667
Gorai.012G078200 Gossypium raimondii Gorai.012G078200 I 0.666
Thhalv10000438m.g Eutrema salsugineum Thhalv10000438m.g I 0.666
POPTR_0009s09890 Populus trichocarpa POPTR_0009s09890 I 0.663
POPTR_0008s07100 Populus trichocarpa POPTR_0008s07100 I 0.662
Cla020946 Citrullus lanatus Cla020946 I 0.662
cassava41257.m1 Manihot esculenta cassava41257.m1 I 0.662
gene21001-v1.0-hybrid Fragaria vesca gene21001-v1.0-hybrid I 0.662
SapurV1A.0650s0070 Salix purpurea SapurV1A.0650s0070 I 0.662
MYB73 Arabidopsis thaliana AT4G37260 D 0.661
Bo1g004900 Brassica oleracea Bo1g004900 I 0.661
Bra011749 Brassica rapa Bra011749 I 0.661
Bostr.7867s1585 Boechera stricta Bostr.7867s1585 I 0.661
Cagra.1232s0025 Capsella grandiflora Cagra.1232s0025 I 0.661
Carubv10007638m.g Capsella rubella Carubv10007638m.g I 0.661
gene26289-v1.0-hybrid Fragaria vesca gene26289-v1.0-hybrid I 0.661
Lus10010238.g Linum usitatissimum Lus10010238.g I 0.661