CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ATY53
(
Arabidopsis lyrata
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
scaffold_301452.1
T279379_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATY53
M07078_2.00
Arabidopsis thaliana
YBYACCWAMCDHHNNNNNNNN
NNNNNNNNDDHGKTWGGTRVR
Dap-seq
OMalley et al.(2016)
MYB67_col_a
0.876
0.978
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold_301452.1
Myb
24
71
RGLWSPEEDEKLLRYITTHGHPSWSSVPKLAGLQRCGKSCRLRWINYL
scaffold_301452.1
Myb
77
122
RGTFNAEEEQIIIDVHRILGNKWAQIAKHLPGRTDNEVKNFWNSCI
Links
Other
Myb/SANT
family TFs
Other
Arabidopsis lyrata
TFs
264 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.3640s0047
Boechera stricta
Bostr.3640s0047
I
0.893
30125.m001257
Ricinus communis
30125.m001257
I
0.891
ATY53
Arabidopsis thaliana
AT3G12720
D
0.876
Cagra.5641s0037
Capsella grandiflora
Cagra.5641s0037
I
0.876
Carubv10015099m.g
Capsella rubella
Carubv10015099m.g
I
0.876
Thhalv10022066m.g
Eutrema salsugineum
Thhalv10022066m.g
I
0.869
Bo1g138990
Brassica oleracea
Bo1g138990
I
0.863
Bra039339
Brassica rapa
Bra039339
I
0.863
Bo5g133210
Brassica oleracea
Bo5g133210
I
0.860
Bra034738
Brassica rapa
Bra034738
I
0.860
SapurV1A.0149s0490
Salix purpurea
SapurV1A.0149s0490
I
0.860
SapurV1A.4138s0010
Salix purpurea
SapurV1A.4138s0010
I
0.860
TCM_005977
Theobroma cacao
TCM_005977
I
0.849
GLYMA08G17371
Glycine max
GLYMA08G17371
I
0.848
cassava44228.m1
Manihot esculenta
cassava44228.m1
I
0.846
Gorai.004G268300
Gossypium raimondii
Gorai.004G268300
I
0.845
cassava33147.m1
Manihot esculenta
cassava33147.m1
I
0.843
LjT35F06.10.nd
Lotus japonicus
LjT35F06.10.nd
I
0.842
SapurV1A.0122s0490
Salix purpurea
SapurV1A.0122s0490
I
0.833
POPTR_0008s08110
Populus trichocarpa
POPTR_0008s08110
I
0.830
Pm010927
Prunus mume
Pm010927
I
0.828
MTR_2g064160
Medicago truncatula
MTR_2g064160
I
0.824
ATY53
Vitis vinifera
VIT_19s0085g00940
I
0.821
TCM_033645
Theobroma cacao
TCM_033645
I
0.815
Eucgr.E04323
Eucalyptus grandis
Eucgr.E04323
I
0.814
POPTR_0003s15440
Populus trichocarpa
POPTR_0003s15440
I
0.812
27956.m000359
Ricinus communis
27956.m000359
I
0.812
MDP0000157506
Malus domestica
MDP0000157506
I
0.811
POPTR_0001s12240
Populus trichocarpa
POPTR_0001s12240
I
0.810
cassava11527.m1
Manihot esculenta
cassava11527.m1
I
0.807
SapurV1A.0093s0250
Salix purpurea
SapurV1A.0093s0250
I
0.806
GLYMA15G41810
Glycine max
GLYMA15G41810
I
0.803
MDP0000226667
Malus domestica
MDP0000226667
I
0.801
Aquca_030_00294
Aquilegia coerulea
Aquca_030_00294
I
0.797
Ciclev10006752m.g
Citrus clementina
Ciclev10006752m.g
I
0.797
orange1.1g036087m.g
Citrus sinensis
orange1.1g036087m.g
I
0.797
Ciclev10018009m.g
Citrus clementina
Ciclev10018009m.g
I
0.796
orange1.1g039070m.g
Citrus sinensis
orange1.1g039070m.g
I
0.796
VIT_01s0010g00410
Vitis vinifera
VIT_01s0010g00410
I
0.792
PRUPE_ppa026618mg
Prunus persica
PRUPE_ppa026618mg
I
0.786
Pm010847
Prunus mume
Pm010847
I
0.786
SapurV1A.0236s0090
Salix purpurea
SapurV1A.0236s0090
I
0.785
cassava26068.m1
Manihot esculenta
cassava26068.m1
I
0.784
chr3.CM0049.330.nc
Lotus japonicus
chr3.CM0049.330.nc
I
0.781
Solyc02g082040.2
Solanum lycopersicum
Solyc02g082040.2
I
0.780
POPTR_0010s18170
Populus trichocarpa
POPTR_0010s18170
I
0.778
GSMUA_Achr9G11190_001
Musa acuminata
GSMUA_Achr9G11190_001
I
0.776
PRUPE_ppa022859mg
Prunus persica
PRUPE_ppa022859mg
I
0.764
gene19715-v1.0-hybrid
Fragaria vesca
gene19715-v1.0-hybrid
I
0.754
BGIOSGA024270
Oryza indica
BGIOSGA024270
I
0.753
F775_00835
Aegilops tauschii
F775_00835
I
0.753
GRMZM2G172327
Zea mays
GRMZM2G172327
I
0.753
LPERR07G12760
Leersia perrieri
LPERR07G12760
I
0.753
MLOC_56753
Hordeum vulgare
MLOC_56753
I
0.753
OBART07G15150
Oryza barthii
OBART07G15150
I
0.753
OMERI07G11910
Oryza meridionalis
OMERI07G11910
I
0.753
OPUNC07G13970
Oryza punctata
OPUNC07G13970
I
0.753
ORGLA07G0124200
Oryza glaberrima
ORGLA07G0124200
I
0.753
ORUFI07G15620
Oryza rufipogon
ORUFI07G15620
I
0.753
OS07G0497500
Oryza sativa
OS07G0497500
I
0.753
Sb02g033830
Sorghum bicolor
Sb02g033830
I
0.753
Si030152m.g
Setaria italica
Si030152m.g
I
0.753
Traes_2AS_40FA27AE7
Triticum aestivum
Traes_2AS_40FA27AE7
I
0.753
TRIUR3_26358
Triticum urartu
TRIUR3_26358
I
0.753
Pavir.Ba00923
Panicum virgatum
Pavir.Ba00923
I
0.753
Pavir.Bb02786
Panicum virgatum
Pavir.Bb02786
I
0.753
GLYMA15G02955
Glycine max
GLYMA15G02955
I
0.752
AMTR_s00032p00221670
Amborella trichopoda
AMTR_s00032p00221670
I
0.749
MTR_8g017540
Medicago truncatula
MTR_8g017540
I
0.749
GLYMA07G01050
Glycine max
GLYMA07G01050
I
0.742
GLYMA08G20440
Glycine max
GLYMA08G20440
I
0.742
GLYMA13G42431
Glycine max
GLYMA13G42431
I
0.742
MYB26
Populus trichocarpa
POPTR_0001s20370
I
0.742
PRUPE_ppa015032mg
Prunus persica
PRUPE_ppa015032mg
I
0.742
Solyc03g121740.1
Solanum lycopersicum
Solyc03g121740.1
I
0.742
TCM_029065
Theobroma cacao
TCM_029065
I
0.742
Ca_02730
Cicer arietinum
Ca_02730
I
0.742
Ca_10069
Cicer arietinum
Ca_10069
I
0.742
Pm013322
Prunus mume
Pm013322
I
0.742
Gorai.011G063900
Gossypium raimondii
Gorai.011G063900
I
0.742
Lus10015608.g
Linum usitatissimum
Lus10015608.g
I
0.742
MDP0000148894
Malus domestica
MDP0000148894
I
0.742
SapurV1A.0177s0130
Salix purpurea
SapurV1A.0177s0130
I
0.742
PK22855.1
Cannabis sativa
PK22855.1
I
0.742
GSMUA_Achr9G25110_001
Musa acuminata
GSMUA_Achr9G25110_001
I
0.741
Cla012793
Citrullus lanatus
Cla012793
I
0.740
Cucsa.340960
Cucumis sativus
Cucsa.340960
I
0.740
MTR_8g017440
Medicago truncatula
MTR_8g017440
I
0.739
cassava176.valid.m1
Manihot esculenta
cassava176.valid.m1
I
0.739
gene19934-v1.0-hybrid
Fragaria vesca
gene19934-v1.0-hybrid
I
0.739
Aquca_020_00444
Aquilegia coerulea
Aquca_020_00444
I
0.738
PGSC0003DMG400007325
Solanum tuberosum
PGSC0003DMG400007325
I
0.735
Bo1g134790
Brassica oleracea
Bo1g134790
I
0.733
Bra021515
Brassica rapa
Bra021515
I
0.733
Eucgr.F03143
Eucalyptus grandis
Eucgr.F03143
I
0.733
Thhalv10021042m.g
Eutrema salsugineum
Thhalv10021042m.g
I
0.733
Gorai.009G142200
Gossypium raimondii
Gorai.009G142200
I
0.731
GSMUA_Achr8G03510_001
Musa acuminata
GSMUA_Achr8G03510_001
I
0.730
Solyc10g005240.2
Solanum lycopersicum
Solyc10g005240.2
I
0.730
cassava34928.m1
Manihot esculenta
cassava34928.m1
I
0.730
OB07G21090
Oryza brachyantha
OB07G21090
I
0.729
Traes_2BS_CA02DC5B2
Triticum aestivum
Traes_2BS_CA02DC5B2
I
0.729
gene06920-v1.0-hybrid
Fragaria vesca
gene06920-v1.0-hybrid
I
0.729
SapurV1A.0538s0150
Salix purpurea
SapurV1A.0538s0150
I
0.729
SapurV1A.1869s0040
Salix purpurea
SapurV1A.1869s0040
I
0.729
MTR_8g017500
Medicago truncatula
MTR_8g017500
I
0.723
BGIOSGA004306
Oryza indica
BGIOSGA004306
I
0.718
OLONG_008660
Oryza longistaminata
OLONG_008660
I
0.718
ORGLA01G0234600
Oryza glaberrima
ORGLA01G0234600
I
0.718
OS01G0709000
Oryza sativa
OS01G0709000
I
0.718
Ciclev10027201m.g
Citrus clementina
Ciclev10027201m.g
I
0.718
MTR_8g017350
Medicago truncatula
MTR_8g017350
I
0.717
BRADI1G61397
Brachypodium distachyon
BRADI1G61397
I
0.716
MTR_8g017340
Medicago truncatula
MTR_8g017340
I
0.713
mgf026023m
Mimulus guttatus
mgf026023m
I
0.713
MTR_2g099740
Medicago truncatula
MTR_2g099740
I
0.712
PGSC0003DMG400037038
Solanum tuberosum
PGSC0003DMG400037038
I
0.712
evm.TU.supercontig_25.69
Carica papaya
evm.TU.supercontig_25.69
I
0.712
BRADI2G47887
Brachypodium distachyon
BRADI2G47887
I
0.709
LPERR01G24370
Leersia perrieri
LPERR01G24370
I
0.709
OB01G37410
Oryza brachyantha
OB01G37410
I
0.709
OPUNC01G28160
Oryza punctata
OPUNC01G28160
I
0.709
MYB26
Vitis vinifera
VIT_09s0002g01670
I
0.708
Sb03g032600
Sorghum bicolor
Sb03g032600
I
0.706
Si002319m.g
Setaria italica
Si002319m.g
I
0.706
Pavir.Ea02594
Panicum virgatum
Pavir.Ea02594
I
0.706
MYB26
Arabidopsis thaliana
AT3G13890
I
0.703
MYB26
Arabidopsis lyrata
fgenesh2_kg.3__1496__AT3G13890.1
I
0.703
Bostr.28625s0318
Boechera stricta
Bostr.28625s0318
I
0.703
Cagra.0736s0026
Capsella grandiflora
Cagra.0736s0026
I
0.703
Carubv10015767m.g
Capsella rubella
Carubv10015767m.g
I
0.703
GSMUA_Achr6G35800_001
Musa acuminata
GSMUA_Achr6G35800_001
I
0.702
LPERR06G07150
Leersia perrieri
LPERR06G07150
I
0.702
Cagra.10702s0006
Capsella grandiflora
Cagra.10702s0006
I
0.701
Carubv10020714m.g
Capsella rubella
Carubv10020714m.g
I
0.701
Lus10038395.g
Linum usitatissimum
Lus10038395.g
I
0.698
PK29171.1
Cannabis sativa
PK29171.1
I
0.698
BGIOSGA027659
Oryza indica
BGIOSGA027659
I
0.695
BRADI1G26920
Brachypodium distachyon
BRADI1G26920
I
0.695
GRMZM2G325907
Zea mays
GRMZM2G325907
I
0.695
LPERR08G03020
Leersia perrieri
LPERR08G03020
I
0.695
OB08G13090
Oryza brachyantha
OB08G13090
I
0.695
OBART08G03020
Oryza barthii
OBART08G03020
I
0.695
OGLUM08G03030
Oryza glumaepatula
OGLUM08G03030
I
0.695
OMERI08G02950
Oryza meridionalis
OMERI08G02950
I
0.695
ONIVA06G02400
Oryza nivara
ONIVA06G02400
I
0.695
ORGLA08G0023900
Oryza glaberrima
ORGLA08G0023900
I
0.695
ORUFI08G03380
Oryza rufipogon
ORUFI08G03380
I
0.695
OS08G0151300
Oryza sativa
OS08G0151300
I
0.695
Sb07g003320
Sorghum bicolor
Sb07g003320
I
0.695
Pavir.Fb00364
Panicum virgatum
Pavir.Fb00364
I
0.695
Pavir.J29561
Panicum virgatum
Pavir.J29561
I
0.695
MTR_8g017390
Medicago truncatula
MTR_8g017390
I
0.694
OB06G17320
Oryza brachyantha
OB06G17320
I
0.693
AMTR_s00079p00143780
Amborella trichopoda
AMTR_s00079p00143780
I
0.691
OBART06G07710
Oryza barthii
OBART06G07710
I
0.689
OGLUM06G08200
Oryza glumaepatula
OGLUM06G08200
I
0.689
ONIVA06G08940
Oryza nivara
ONIVA06G08940
I
0.689
ORGLA06G0073000
Oryza glaberrima
ORGLA06G0073000
I
0.689
ORUFI06G07920
Oryza rufipogon
ORUFI06G07920
I
0.689
OS06G0221000
Oryza sativa
OS06G0221000
I
0.689
OB08G25790
Oryza brachyantha
OB08G25790
I
0.688
OGLUM08G19650
Oryza glumaepatula
OGLUM08G19650
I
0.688
OMERI08G14710
Oryza meridionalis
OMERI08G14710
I
0.688
ONIVA08G20680
Oryza nivara
ONIVA08G20680
I
0.688
ORGLA08G0162300
Oryza glaberrima
ORGLA08G0162300
I
0.688
ORUFI08G20890
Oryza rufipogon
ORUFI08G20890
I
0.688
GSMUA_AchrUn_randomG15560_001
Musa acuminata
GSMUA_AchrUn_randomG15560_001
I
0.686
30054.m000809
Ricinus communis
30054.m000809
I
0.685
Pavir.Fb01820
Panicum virgatum
Pavir.Fb01820
I
0.685
Pavir.J21520
Panicum virgatum
Pavir.J21520
I
0.684
GRMZM2G111045
Zea mays
GRMZM2G111045
I
0.683
GSMUA_Achr5G18080_001
Musa acuminata
GSMUA_Achr5G18080_001
I
0.683
GSMUA_Achr10G19130_001
Musa acuminata
GSMUA_Achr10G19130_001
I
0.680
POPTR_0005s07590
Populus trichocarpa
POPTR_0005s07590
I
0.680
PRUPE_ppa019923mg
Prunus persica
PRUPE_ppa019923mg
I
0.680
TCM_001102
Theobroma cacao
TCM_001102
I
0.680
TCM_034902
Theobroma cacao
TCM_034902
I
0.680
Pm002011
Prunus mume
Pm002011
I
0.680
evm.TU.supercontig_752.1
Carica papaya
evm.TU.supercontig_752.1
I
0.680
gene16287-v1.0-hybrid
Fragaria vesca
gene16287-v1.0-hybrid
I
0.680
Gorai.009G281000
Gossypium raimondii
Gorai.009G281000
I
0.680
MDP0000228252
Malus domestica
MDP0000228252
I
0.680
MDP0000302984
Malus domestica
MDP0000302984
I
0.680
MDP0000320772
Malus domestica
MDP0000320772
I
0.680
SapurV1A.0403s0220
Salix purpurea
SapurV1A.0403s0220
I
0.680
SapurV1A.2488s0010
Salix purpurea
SapurV1A.2488s0010
I
0.680
chr2.CM0124.80.nc
Lotus japonicus
chr2.CM0124.80.nc
I
0.680
Ciclev10003251m.g
Citrus clementina
Ciclev10003251m.g
I
0.679
BRADI3G17165
Brachypodium distachyon
BRADI3G17165
I
0.678
F775_28951
Aegilops tauschii
F775_28951
I
0.678
GSMUA_Achr10G08070_001
Musa acuminata
GSMUA_Achr10G08070_001
I
0.678
GSMUA_Achr2G02970_001
Musa acuminata
GSMUA_Achr2G02970_001
I
0.678
MLOC_16981
Hordeum vulgare
MLOC_16981
I
0.678
OPUNC08G02760
Oryza punctata
OPUNC08G02760
I
0.678
Traes_7DL_5BD0D4BD1
Triticum aestivum
Traes_7DL_5BD0D4BD1
I
0.678
TRIUR3_24104
Triticum urartu
TRIUR3_24104
I
0.678
Cla013211
Citrullus lanatus
Cla013211
I
0.678
Cucsa.318610
Cucumis sativus
Cucsa.318610
I
0.678
PDK_20s1854611g001
Phoenix dactylifera
PDK_20s1854611g001
I
0.678
VIT_05s0020g01100
Vitis vinifera
VIT_05s0020g01100
I
0.677
BRADI1G45510
Brachypodium distachyon
BRADI1G45510
I
0.676
F775_17110
Aegilops tauschii
F775_17110
I
0.676
GRMZM2G088783
Zea mays
GRMZM2G088783
I
0.676
MLOC_18177
Hordeum vulgare
MLOC_18177
I
0.676
Traes_3AL_E3BF20F0D
Triticum aestivum
Traes_3AL_E3BF20F0D
I
0.676
TRIUR3_25230
Triticum urartu
TRIUR3_25230
I
0.676
GLYMA01G02070
Glycine max
GLYMA01G02070
I
0.675
GLYMA09G33870
Glycine max
GLYMA09G33870
I
0.675
Eucgr.H01337
Eucalyptus grandis
Eucgr.H01337
I
0.674
evm.TU.supercontig_18.232
Carica papaya
evm.TU.supercontig_18.232
I
0.673
gene31836-v1.0-hybrid
Fragaria vesca
gene31836-v1.0-hybrid
I
0.673
F775_06136
Aegilops tauschii
F775_06136
I
0.672
Traes_7BS_7E91DE546
Triticum aestivum
Traes_7BS_7E91DE546
I
0.672
Traes_7DS_469ED3135
Triticum aestivum
Traes_7DS_469ED3135
I
0.672
cassava44907.m1
Manihot esculenta
cassava44907.m1
I
0.672
MDP0000158937
Malus domestica
MDP0000158937
I
0.672
AMTR_s00038p00183620
Amborella trichopoda
AMTR_s00038p00183620
I
0.671
Si008086m.g
Setaria italica
Si008086m.g
I
0.671
VIT_07s0141g00100
Vitis vinifera
VIT_07s0141g00100
I
0.671
AtMYB93
Vitis vinifera
VIT_18s0001g05670
I
0.670
MYB39
Vitis vinifera
VIT_02s0012g01650
I
0.669
cassava17115.m1
Manihot esculenta
cassava17115.m1
I
0.669
BGIOSGA010658
Oryza indica
BGIOSGA010658
I
0.668
F775_18488
Aegilops tauschii
F775_18488
I
0.668
GRMZM2G147698
Zea mays
GRMZM2G147698
I
0.668
MLOC_37780
Hordeum vulgare
MLOC_37780
I
0.668
OMERI03G17220
Oryza meridionalis
OMERI03G17220
I
0.668
Sb01g034270
Sorghum bicolor
Sb01g034270
I
0.668
Si036638m.g
Setaria italica
Si036638m.g
I
0.668
Traes_7AL_0BCF482E8
Triticum aestivum
Traes_7AL_0BCF482E8
I
0.668
Traes_7DL_AD4395F8F
Triticum aestivum
Traes_7DL_AD4395F8F
I
0.668
TRIUR3_20789
Triticum urartu
TRIUR3_20789
I
0.668
mgf012840m
Mimulus guttatus
mgf012840m
I
0.668
Pavir.J03230
Panicum virgatum
Pavir.J03230
I
0.668
GSMUA_Achr10G24560_001
Musa acuminata
GSMUA_Achr10G24560_001
I
0.667
Traes_7AL_04D939077
Triticum aestivum
Traes_7AL_04D939077
I
0.667
GRMZM2G040924
Zea mays
GRMZM2G040924
I
0.666
Sb04g033670
Sorghum bicolor
Sb04g033670
I
0.666
Aquca_013_00356
Aquilegia coerulea
Aquca_013_00356
I
0.666
AMTR_s00003p00271440
Amborella trichopoda
AMTR_s00003p00271440
I
0.665
AtMYB53
Arabidopsis thaliana
AT5G65230
I
0.665
AtMYB53
Arabidopsis lyrata
fgenesh2_kg.8__2570__AT5G65230.1
I
0.665
e_gw1.317.17.1
Physcomitrella patens
e_gw1.317.17.1
I
0.665
Bostr.0568s0266
Boechera stricta
Bostr.0568s0266
I
0.665
GSMUA_Achr3G06470_001
Musa acuminata
GSMUA_Achr3G06470_001
I
0.664
PGSC0003DMG400021654
Solanum tuberosum
PGSC0003DMG400021654
I
0.664
Solyc05g048830.2
Solanum lycopersicum
Solyc05g048830.2
I
0.664
Si017785m.g
Setaria italica
Si017785m.g
I
0.663
mgf024107m
Mimulus guttatus
mgf024107m
I
0.663
Ciclev10026023m.g
Citrus clementina
Ciclev10026023m.g
I
0.663
Gorai.007G236800
Gossypium raimondii
Gorai.007G236800
I
0.663
orange1.1g045434m.g
Citrus sinensis
orange1.1g045434m.g
I
0.663
GSMUA_Achr7G17250_001
Musa acuminata
GSMUA_Achr7G17250_001
I
0.662
estExt_gwp_gw1.C_20043
Physcomitrella patens
estExt_gwp_gw1.C_20043
I
0.662
Pavir.J34972
Panicum virgatum
Pavir.J34972
I
0.662
POPTR_0005s17080
Populus trichocarpa
POPTR_0005s17080
I
0.661
PRUPE_ppa026006mg
Prunus persica
PRUPE_ppa026006mg
I
0.661
Pm004557
Prunus mume
Pm004557
I
0.661
Eucgr.K00555
Eucalyptus grandis
Eucgr.K00555
I
0.661
MDP0000123873
Malus domestica
MDP0000123873
I
0.661
MDP0000126343
Malus domestica
MDP0000126343
I
0.661
SapurV1A.0966s0040
Salix purpurea
SapurV1A.0966s0040
I
0.661
SapurV1A.1009s0010
Salix purpurea
SapurV1A.1009s0010
I
0.661