SELMODRAFT_415531 (Selaginella moellendorffii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 SELMODRAFT_415531 T279537_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KAN4
M00881_2.00 		Arabidopsis thaliana
NWNRTBCNN
NNGVAYNWN		 PBM
Franco-Zorrilla et al.(2014)
KAN4 		0.838 0.872
KAN1
M00878_2.00 		Arabidopsis thaliana
NNRTNBNN
NNVNAYNN		 PBM
Franco-Zorrilla et al.(2014)
KAN1 		0.749 0.851
KAN1
M02308_2.00 		Arabidopsis thaliana
NDNDTAHNHN
NDNDTAHNHN		 PBM
Weirauch et al.(2014)
pTH7135 		0.749 0.851
PK26523.1
M01283_2.00 		Cannabis sativa
NWHATTCYNN
NNRGAATDWN		 PBM
Lambert et al.(2019)
pTH11304 		0.724 0.745
AT2G40260
M07057_2.00 		Arabidopsis thaliana
HHWDWAHATTCYHTN
NADRGAATDTWHWDD		 Dap-seq
OMalley et al.(2016)
AT2G40260_col_a 		0.718 0.723
AT2G40260
M07058_2.00 		Arabidopsis thaliana
NNDDWHHNDDWAHATTCYHT
ADRGAATDTWHHNDDWHHNN		 Dap-seq
OMalley et al.(2016)
AT2G40260_colamp_a 		0.718 0.723
KAN2
M07018_2.00 		Arabidopsis thaliana
HHHNDWATATTCTYH
DRAGAATATWHNDDD		 Dap-seq
OMalley et al.(2016)
KAN2_col_a 		0.715 0.830
KAN2
M07019_2.00 		Arabidopsis thaliana
NWWTATTCYYH
DRRGAATAWWN		 Dap-seq
OMalley et al.(2016)
KAN2_colamp_a 		0.715 0.830
AT2G38300
M07056_2.00 		Arabidopsis thaliana
WAHATTCYHTH
DADRGAATDTW		 Dap-seq
OMalley et al.(2016)
AT2G38300_col_a 		0.696 0.702
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ23536 Myb 222 273

Links

Other Myb/SANT family TFs
Other Selaginella moellendorffii TFs

574 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA025749 Oryza indica BGIOSGA025749 N
BRADI1G26960 Brachypodium distachyon BRADI1G26960 N
GRMZM2G104268 Zea mays GRMZM2G104268 N
MLOC_56322 Hordeum vulgare MLOC_56322 N
OB07G21030 Oryza brachyantha OB07G21030 N
OLONG_010535 Oryza longistaminata OLONG_010535 N
ORGLA07G0123700 Oryza glaberrima ORGLA07G0123700 N
Pavir.Ba00916 Panicum virgatum Pavir.Ba00916 N
Pavir.J19858 Panicum virgatum Pavir.J19858 N
Sb06g031160 Sorghum bicolor Sb06g031160 N
Si028955m.g Setaria italica Si028955m.g N
Traes_7AL_635989DBF Triticum aestivum Traes_7AL_635989DBF N
Traes_7DL_9D97AB442 Triticum aestivum Traes_7DL_9D97AB442 N
TRIUR3_11036 Triticum urartu TRIUR3_11036 N