CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SELMODRAFT_75978
(
Selaginella moellendorffii
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
SELMODRAFT_75978
T279605_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB_AVIMB
M11068_2.00
Avian myeloblastosis virus
VRYAACKGNH
DNCMGTTRYB
Transfac
Matys et al.(2006)
V$VMYB_01
0.679
0.730
MYB_AVIMB
M11069_2.00
Avian myeloblastosis virus
BVYAACGGH
DCCGTTRBV
Transfac
Matys et al.(2006)
V$VMYB_02
0.679
0.730
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFJ37285
Myb
18
40
LFPAAFFKNRTDVQCLHRWQKVL
EFJ37285
Myb
46
92
KGPWTKEEDDRIIELVNKYGAKKWSVIAQNLPGRIGKQCRERWHNHL
EFJ37285
Myb
98
143
RDAWTQQEDLALIYAHQRYGNKWAEIAKFLPGRTDNSIKNHWNSTM
Links
Other
Myb/SANT
family TFs
Other
Selaginella moellendorffii
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava9078.m1
Manihot esculenta
cassava9078.m1
I
0.767
F775_12121
Aegilops tauschii
F775_12121
N
0.747
TRIUR3_33469
Triticum urartu
TRIUR3_33469
N
0.747
PDK_20s1314361g001
Phoenix dactylifera
PDK_20s1314361g001
N
0.745
Ca_21127
Cicer arietinum
Ca_21127
I
0.735
OPUNC01G35700
Oryza punctata
OPUNC01G35700
N
0.713
SELMODRAFT_411844
Selaginella moellendorffii
SELMODRAFT_411844
I
0.713
MYBL1
Bos taurus
ENSBTAG00000011981
I
0.699
MYBL1
Choloepus hoffmanni
ENSCHOG00000012311
I
0.699
e_gw1.3.910.1
Micromonas pusilla
e_gw1.3.910.1
N
0.687
mgf002244m
Mimulus guttatus
mgf002244m
N
0.686
MYB_AVIMB
Avian myeloblastosis virus
MYB_AVIMB
D
0.679
e_gw1.36.4.1
Physcomitrella patens
e_gw1.36.4.1
I
0.677
MLOC_50701
Hordeum vulgare
MLOC_50701
N
0.675
e_gw1.120.1.1
Physcomitrella patens
e_gw1.120.1.1
I
0.671