CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si017899m.g
(
Setaria italica
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Si017899m.g
T279800_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB55
M00876_2.00
Arabidopsis thaliana
ACCWAMCD
HGKTWGGT
PBM
Franco-Zorrilla et al.(2014)
MYB55
0.684
0.731
MYB55
M07102_2.00
Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND
Dap-seq
OMalley et al.(2016)
MYB55_colamp_a
0.684
0.731
MYB55
M07103_2.00
Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN
Dap-seq
OMalley et al.(2016)
MYB55_col
0.684
0.731
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si017899m
Myb
15
62
KGLWSPEEDQRLRDYILKHGLGCWSAVPAKAGLQRNGKSCRLRWINYL
Si017899m
Myb
68
113
RGMFSQEEEDVVINLQAKLGNKWSQIAMHLPGRTDNEVKNYWNSYL
Links
Other
Myb/SANT
family TFs
Other
Setaria italica
TFs
237 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI3G01377
Brachypodium distachyon
BRADI3G01377
I
0.909
F775_16743
Aegilops tauschii
F775_16743
I
0.909
GRMZM2G088189
Zea mays
GRMZM2G088189
I
0.909
MLOC_58869
Hordeum vulgare
MLOC_58869
I
0.909
Sb04g001110
Sorghum bicolor
Sb04g001110
I
0.909
Traes_6AS_7C1FD879C
Triticum aestivum
Traes_6AS_7C1FD879C
I
0.909
Traes_6BS_B2C9F123A
Triticum aestivum
Traes_6BS_B2C9F123A
I
0.909
Traes_6DS_8F05AE571
Triticum aestivum
Traes_6DS_8F05AE571
I
0.909
TRIUR3_11495
Triticum urartu
TRIUR3_11495
I
0.909
Pavir.Aa03518
Panicum virgatum
Pavir.Aa03518
I
0.909
Pavir.J24194
Panicum virgatum
Pavir.J24194
I
0.909
BGIOSGA007254
Oryza indica
BGIOSGA007254
I
0.884
LPERR02G00910
Leersia perrieri
LPERR02G00910
I
0.884
OB02G10930
Oryza brachyantha
OB02G10930
I
0.884
OPUNC02G00570
Oryza punctata
OPUNC02G00570
I
0.884
ORGLA02G0010000
Oryza glaberrima
ORGLA02G0010000
I
0.884
ORUFI02G01120
Oryza rufipogon
ORUFI02G01120
I
0.884
GSMUA_Achr1G17480_001
Musa acuminata
GSMUA_Achr1G17480_001
N
0.758
VIT_16s0050g00050
Vitis vinifera
VIT_16s0050g00050
I
0.735
Cla001724
Citrullus lanatus
Cla001724
I
0.730
Eucgr.B01827
Eucalyptus grandis
Eucgr.B01827
I
0.727
POPTR_0013s00290
Populus trichocarpa
POPTR_0013s00290
I
0.718
SapurV1A.0442s0250
Salix purpurea
SapurV1A.0442s0250
I
0.718
evm.TU.supercontig_107.47
Carica papaya
evm.TU.supercontig_107.47
I
0.716
GSMUA_Achr8G11340_001
Musa acuminata
GSMUA_Achr8G11340_001
I
0.712
PRUPE_ppa019729mg
Prunus persica
PRUPE_ppa019729mg
I
0.712
Pm019344
Prunus mume
Pm019344
I
0.712
Cucsa.313950
Cucumis sativus
Cucsa.313950
I
0.711
PDK_20s1606731g001
Phoenix dactylifera
PDK_20s1606731g001
I
0.711
gene13281-v1.0-hybrid
Fragaria vesca
gene13281-v1.0-hybrid
I
0.710
Eucgr.K02806
Eucalyptus grandis
Eucgr.K02806
I
0.709
PGSC0003DMG400014291
Solanum tuberosum
PGSC0003DMG400014291
I
0.707
BRADI5G16672
Brachypodium distachyon
BRADI5G16672
I
0.706
Traes_2BL_604FE7639
Triticum aestivum
Traes_2BL_604FE7639
I
0.706
Sb06g023610
Sorghum bicolor
Sb06g023610
I
0.702
Traes_2BL_03F3475CD
Triticum aestivum
Traes_2BL_03F3475CD
I
0.702
Eucgr.A02796
Eucalyptus grandis
Eucgr.A02796
I
0.702
F775_08647
Aegilops tauschii
F775_08647
I
0.701
GRMZM2G170049
Zea mays
GRMZM2G170049
I
0.701
MLOC_13019
Hordeum vulgare
MLOC_13019
I
0.701
Traes_6AL_D10CBA40D
Triticum aestivum
Traes_6AL_D10CBA40D
I
0.701
Traes_6BL_CE61B9510
Triticum aestivum
Traes_6BL_CE61B9510
I
0.701
Traes_6DL_A014E9069
Triticum aestivum
Traes_6DL_A014E9069
I
0.701
TRIUR3_32691
Triticum urartu
TRIUR3_32691
I
0.701
Si012304m.g
Setaria italica
Si012304m.g
I
0.700
Pavir.Ga00879
Panicum virgatum
Pavir.Ga00879
I
0.700
Pavir.Gb00734
Panicum virgatum
Pavir.Gb00734
I
0.700
POPTR_0015s13190
Populus trichocarpa
POPTR_0015s13190
I
0.699
Lus10027458.g
Linum usitatissimum
Lus10027458.g
I
0.698
Lus10039213.g
Linum usitatissimum
Lus10039213.g
I
0.698
MDP0000152575
Malus domestica
MDP0000152575
I
0.698
cassava26284.m1
Manihot esculenta
cassava26284.m1
I
0.697
PK18276.1
Cannabis sativa
PK18276.1
I
0.697
BRADI3G49970
Brachypodium distachyon
BRADI3G49970
I
0.696
Si017947m.g
Setaria italica
Si017947m.g
I
0.695
MTR_6g055910
Medicago truncatula
MTR_6g055910
I
0.692
OB04G26810
Oryza brachyantha
OB04G26810
I
0.691
Traes_2AL_962A9D448
Triticum aestivum
Traes_2AL_962A9D448
I
0.689
GSMUA_Achr4G29410_001
Musa acuminata
GSMUA_Achr4G29410_001
I
0.688
LPERR04G16000
Leersia perrieri
LPERR04G16000
I
0.688
MTR_1g100667
Medicago truncatula
MTR_1g100667
I
0.687
Solyc03g025870.2
Solanum lycopersicum
Solyc03g025870.2
I
0.687
Pavir.Ab02417
Panicum virgatum
Pavir.Ab02417
I
0.686
BGIOSGA008698
Oryza indica
BGIOSGA008698
I
0.685
GLYMA09G25655
Glycine max
GLYMA09G25655
I
0.685
OB02G32950
Oryza brachyantha
OB02G32950
I
0.685
OBART02G25570
Oryza barthii
OBART02G25570
I
0.685
OMERI02G25080
Oryza meridionalis
OMERI02G25080
I
0.685
ONIVA02G28010
Oryza nivara
ONIVA02G28010
I
0.685
OPUNC02G23410
Oryza punctata
OPUNC02G23410
I
0.685
Eucgr.K00250
Eucalyptus grandis
Eucgr.K00250
I
0.685
MYB55
Arabidopsis thaliana
AT4G01680
D
0.684
Bo9g004210
Brassica oleracea
Bo9g004210
I
0.684
Bra036317
Brassica rapa
Bra036317
I
0.684
MYB55
Arabidopsis lyrata
fgenesh2_kg.6__3543__AT4G01680.1
I
0.684
GLYMA19G41250
Glycine max
GLYMA19G41250
I
0.684
MTR_1g085040
Medicago truncatula
MTR_1g085040
I
0.684
Ca_01072
Cicer arietinum
Ca_01072
I
0.684
Ca_03589
Cicer arietinum
Ca_03589
I
0.684
Bostr.4825s0008
Boechera stricta
Bostr.4825s0008
I
0.684
Cagra.0334s0011
Capsella grandiflora
Cagra.0334s0011
I
0.684
Carubv10001308m.g
Capsella rubella
Carubv10001308m.g
I
0.684
GRMZM2G496770
Zea mays
GRMZM2G496770
I
0.683
TCM_015157
Theobroma cacao
TCM_015157
I
0.683
Ca_19758
Cicer arietinum
Ca_19758
I
0.683
Cla005219
Citrullus lanatus
Cla005219
I
0.683
Cucsa.051050
Cucumis sativus
Cucsa.051050
I
0.683
MDP0000896053
Malus domestica
MDP0000896053
I
0.683
GLYMA03G38660
Glycine max
GLYMA03G38660
I
0.681
GLYMA20G22230
Glycine max
GLYMA20G22230
I
0.681
OGLUM02G26100
Oryza glumaepatula
OGLUM02G26100
I
0.681
Sb04g033680
Sorghum bicolor
Sb04g033680
I
0.678
SapurV1A.0754s0180
Salix purpurea
SapurV1A.0754s0180
I
0.678
chr5.CM0148.380.nc
Lotus japonicus
chr5.CM0148.380.nc
I
0.678
ORUFI02G26980
Oryza rufipogon
ORUFI02G26980
I
0.676
BGIOSGA016820
Oryza indica
BGIOSGA016820
I
0.675
GLYMA16G31280
Glycine max
GLYMA16G31280
I
0.675
OBART04G19730
Oryza barthii
OBART04G19730
I
0.675
OGLUM04G19590
Oryza glumaepatula
OGLUM04G19590
I
0.675
OMERI04G16730
Oryza meridionalis
OMERI04G16730
I
0.675
ONIVA04G17950
Oryza nivara
ONIVA04G17950
I
0.675
OPUNC04G17450
Oryza punctata
OPUNC04G17450
I
0.675
ORGLA04G0168700
Oryza glaberrima
ORGLA04G0168700
I
0.675
ORGLA10G0151700
Oryza glaberrima
ORGLA10G0151700
I
0.675
ORUFI04G21270
Oryza rufipogon
ORUFI04G21270
I
0.675
OS04G0532800
Oryza sativa
OS04G0532800
I
0.675
POPTR_0012s08600
Populus trichocarpa
POPTR_0012s08600
I
0.675
POPTR_0015s09430
Populus trichocarpa
POPTR_0015s09430
I
0.675
cassava19716.m1
Manihot esculenta
cassava19716.m1
I
0.675
SapurV1A.0011s0520
Salix purpurea
SapurV1A.0011s0520
I
0.675
SapurV1A.1253s0100
Salix purpurea
SapurV1A.1253s0100
I
0.674
PRUPE_ppa019718mg
Prunus persica
PRUPE_ppa019718mg
I
0.673
TCM_026853
Theobroma cacao
TCM_026853
I
0.673
Pm003267
Prunus mume
Pm003267
I
0.673
cassava12868.valid.m1
Manihot esculenta
cassava12868.valid.m1
I
0.673
cassava17679.valid.m1
Manihot esculenta
cassava17679.valid.m1
I
0.673
gene22961-v1.0-hybrid
Fragaria vesca
gene22961-v1.0-hybrid
I
0.673
MDP0000653903
Malus domestica
MDP0000653903
I
0.673
PK03176.1
Cannabis sativa
PK03176.1
I
0.673
GRMZM2G119693
Zea mays
GRMZM2G119693
I
0.672
GLYMA04G36110
Glycine max
GLYMA04G36110
I
0.671
GLYMA05G02550
Glycine max
GLYMA05G02550
I
0.671
GLYMA06G18830
Glycine max
GLYMA06G18830
I
0.671
PGSC0003DMG400027077
Solanum tuberosum
PGSC0003DMG400027077
I
0.671
PRUPE_ppa018561mg
Prunus persica
PRUPE_ppa018561mg
I
0.671
Solyc06g071690.2
Solanum lycopersicum
Solyc06g071690.2
I
0.671
TCM_012174
Theobroma cacao
TCM_012174
I
0.671
VIT_17s0000g09080
Vitis vinifera
VIT_17s0000g09080
I
0.671
Cla003497
Citrullus lanatus
Cla003497
I
0.671
Pm024326
Prunus mume
Pm024326
I
0.671
30147.m013885
Ricinus communis
30147.m013885
I
0.671
cassava33965.m1
Manihot esculenta
cassava33965.m1
I
0.671
Cucsa.098700
Cucumis sativus
Cucsa.098700
I
0.671
Ciclev10024338m.g
Citrus clementina
Ciclev10024338m.g
I
0.671
evm.TU.supercontig_110.11
Carica papaya
evm.TU.supercontig_110.11
I
0.671
gene09845-v1.0-hybrid
Fragaria vesca
gene09845-v1.0-hybrid
I
0.671
orange1.1g016021m.g
Citrus sinensis
orange1.1g016021m.g
I
0.671
PK22647.1
Cannabis sativa
PK22647.1
I
0.671
GSMUA_Achr11G00430_001
Musa acuminata
GSMUA_Achr11G00430_001
I
0.670
GSMUA_Achr11G15910_001
Musa acuminata
GSMUA_Achr11G15910_001
I
0.670
GSMUA_Achr2G18440_001
Musa acuminata
GSMUA_Achr2G18440_001
I
0.670
GSMUA_Achr5G18400_001
Musa acuminata
GSMUA_Achr5G18400_001
I
0.670
MDP0000601420
Malus domestica
MDP0000601420
I
0.670
MDP0000932804
Malus domestica
MDP0000932804
I
0.670
AMTR_s00036p00107460
Amborella trichopoda
AMTR_s00036p00107460
I
0.669
F775_52175
Aegilops tauschii
F775_52175
N
0.668
MLOC_73614
Hordeum vulgare
MLOC_73614
I
0.668
Traes_2AL_2D4100475
Triticum aestivum
Traes_2AL_2D4100475
I
0.668
Traes_2BL_35241DE8D
Triticum aestivum
Traes_2BL_35241DE8D
I
0.668
Traes_2BL_7CEC6A8D7
Triticum aestivum
Traes_2BL_7CEC6A8D7
I
0.668
Eucgr.B00229
Eucalyptus grandis
Eucgr.B00229
I
0.668
MDP0000256645
Malus domestica
MDP0000256645
I
0.668
MDP0000852549
Malus domestica
MDP0000852549
I
0.668
BRADI2G36730
Brachypodium distachyon
BRADI2G36730
I
0.667
MTR_7g111290
Medicago truncatula
MTR_7g111290
I
0.667
Thhalv10028778m.g
Eutrema salsugineum
Thhalv10028778m.g
I
0.667
BGIOSGA010658
Oryza indica
BGIOSGA010658
I
0.666
BGIOSGA026208
Oryza indica
BGIOSGA026208
I
0.666
GLYMA17G09310
Glycine max
GLYMA17G09310
I
0.666
GRMZM2G147698
Zea mays
GRMZM2G147698
I
0.666
GRMZM2G150841
Zea mays
GRMZM2G150841
I
0.666
GSMUA_Achr3G28540_001
Musa acuminata
GSMUA_Achr3G28540_001
I
0.666
LPERR07G20400
Leersia perrieri
LPERR07G20400
I
0.666
OGLUM07G23470
Oryza glumaepatula
OGLUM07G23470
I
0.666
OMERI03G17220
Oryza meridionalis
OMERI03G17220
I
0.666
OMERI07G19830
Oryza meridionalis
OMERI07G19830
I
0.666
ONIVA02G07540
Oryza nivara
ONIVA02G07540
I
0.666
OPUNC07G22080
Oryza punctata
OPUNC07G22080
I
0.666
ORGLA07G0264800
Oryza glaberrima
ORGLA07G0264800
I
0.666
ORUFI07G24600
Oryza rufipogon
ORUFI07G24600
I
0.666
POPTR_0012s13240
Populus trichocarpa
POPTR_0012s13240
I
0.666
Sb02g040480
Sorghum bicolor
Sb02g040480
I
0.666
SELMODRAFT_437219
Selaginella moellendorffii
SELMODRAFT_437219
I
0.666
Si029872m.g
Setaria italica
Si029872m.g
I
0.666
Si036638m.g
Setaria italica
Si036638m.g
I
0.666
Cla019513
Citrullus lanatus
Cla019513
I
0.666
Cucsa.196550
Cucumis sativus
Cucsa.196550
I
0.666
Aquca_011_00538
Aquilegia coerulea
Aquca_011_00538
I
0.666
Pavir.J03230
Panicum virgatum
Pavir.J03230
I
0.666
SapurV1A.1253s0080
Salix purpurea
SapurV1A.1253s0080
I
0.666
POPTR_0012s13260
Populus trichocarpa
POPTR_0012s13260
I
0.665
BRADI1G20250
Brachypodium distachyon
BRADI1G20250
I
0.664
F775_28584
Aegilops tauschii
F775_28584
I
0.664
MLOC_59663
Hordeum vulgare
MLOC_59663
I
0.664
Traes_1AS_1EE692FDC
Triticum aestivum
Traes_1AS_1EE692FDC
I
0.664
Traes_1BS_92EA1F290
Triticum aestivum
Traes_1BS_92EA1F290
I
0.664
Traes_1DS_5BAD8947E
Triticum aestivum
Traes_1DS_5BAD8947E
I
0.664
TRIUR3_15020
Triticum urartu
TRIUR3_15020
I
0.664
Traes_2AS_731C703DE
Triticum aestivum
Traes_2AS_731C703DE
I
0.663
Traes_2BS_E1E541767
Triticum aestivum
Traes_2BS_E1E541767
I
0.663
Traes_2DS_3569AEDFB
Triticum aestivum
Traes_2DS_3569AEDFB
I
0.663
Eucgr.K00555
Eucalyptus grandis
Eucgr.K00555
I
0.663
chr1.CM0206.990.nd
Lotus japonicus
chr1.CM0206.990.nd
I
0.663
GLYMA02G00960
Glycine max
GLYMA02G00960
I
0.662
GLYMA03G38410
Glycine max
GLYMA03G38410
I
0.662
GLYMA10G27940
Glycine max
GLYMA10G27940
I
0.662
GLYMA19G41010
Glycine max
GLYMA19G41010
I
0.662
GRMZM2G041415
Zea mays
GRMZM2G041415
I
0.662
MTR_7g110830
Medicago truncatula
MTR_7g110830
I
0.662
POPTR_0014s10680
Populus trichocarpa
POPTR_0014s10680
I
0.662
TCM_004965
Theobroma cacao
TCM_004965
I
0.662
Ca_03564
Cicer arietinum
Ca_03564
I
0.662
cassava33008.m1
Manihot esculenta
cassava33008.m1
I
0.662
Ciclev10020144m.g
Citrus clementina
Ciclev10020144m.g
I
0.662
Gorai.001G148500
Gossypium raimondii
Gorai.001G148500
I
0.662
Gorai.004G147600
Gossypium raimondii
Gorai.004G147600
I
0.662
Gorai.007G118200
Gossypium raimondii
Gorai.007G118200
I
0.662
Gorai.008G133700
Gossypium raimondii
Gorai.008G133700
I
0.662
Lus10038022.g
Linum usitatissimum
Lus10038022.g
I
0.662
orange1.1g013300m.g
Citrus sinensis
orange1.1g013300m.g
I
0.662
SapurV1A.0264s0440
Salix purpurea
SapurV1A.0264s0440
I
0.662
SapurV1A.0321s0070
Salix purpurea
SapurV1A.0321s0070
I
0.662
SapurV1A.3474s0020
Salix purpurea
SapurV1A.3474s0020
I
0.662
chr5.CM0048.320.nd
Lotus japonicus
chr5.CM0048.320.nd
I
0.662
BGIOSGA019160
Oryza indica
BGIOSGA019160
I
0.661
GLYMA10G38110
Glycine max
GLYMA10G38110
I
0.661
GLYMA20G29710
Glycine max
GLYMA20G29710
I
0.661
GRMZM2G127490
Zea mays
GRMZM2G127490
I
0.661
GRMZM2G171781
Zea mays
GRMZM2G171781
I
0.661
LPERR05G02400
Leersia perrieri
LPERR05G02400
I
0.661
OB05G12630
Oryza brachyantha
OB05G12630
I
0.661
OBART05G02690
Oryza barthii
OBART05G02690
I
0.661
OGLUM05G02680
Oryza glumaepatula
OGLUM05G02680
I
0.661
OLONG_008768
Oryza longistaminata
OLONG_008768
I
0.661
OMERI05G02610
Oryza meridionalis
OMERI05G02610
I
0.661
ONIVA05G02580
Oryza nivara
ONIVA05G02580
I
0.661
OPUNC05G02540
Oryza punctata
OPUNC05G02540
I
0.661
ORGLA05G0025500
Oryza glaberrima
ORGLA05G0025500
I
0.661
ORUFI05G02790
Oryza rufipogon
ORUFI05G02790
I
0.661
OS05G0140100
Oryza sativa
OS05G0140100
I
0.661
Sb03g011640
Sorghum bicolor
Sb03g011640
I
0.661
Si001565m.g
Setaria italica
Si001565m.g
I
0.661
Si022113m.g
Setaria italica
Si022113m.g
I
0.661
Eucgr.B02197
Eucalyptus grandis
Eucgr.B02197
I
0.661
Pavir.Ea01054
Panicum virgatum
Pavir.Ea01054
I
0.661
Pavir.Eb01178
Panicum virgatum
Pavir.Eb01178
I
0.661
Pavir.J40848
Panicum virgatum
Pavir.J40848
I
0.661