CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si019625m.g
(
Setaria italica
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Si019625m.g
T279811_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT1G14600
M01268_2.00
Arabidopsis thaliana
NWAYATTCYN
NRGAATRTWN
PBM
Lambert et al.(2019)
pTH11557
0.720
0.809
PK26523.1
M01283_2.00
Cannabis sativa
NWHATTCYNN
NNRGAATDWN
PBM
Lambert et al.(2019)
pTH11304
0.679
0.766
KAN1
M00878_2.00
Arabidopsis thaliana
NNRTNBNN
NNVNAYNN
PBM
Franco-Zorrilla et al.(2014)
KAN1
0.673
0.681
KAN1
M02308_2.00
Arabidopsis thaliana
NDNDTAHNHN
NDNDTAHNHN
PBM
Weirauch et al.(2014)
pTH7135
0.673
0.681
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si019625m
Myb
20
71
RLRWTSELHRSFVRAVDCLGGQDKATPKLILQLMDVRGLTIAHVKSHLQMQP
Links
Other
Myb/SANT
family TFs
Other
Setaria italica
TFs
390 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy