CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Solyc02g080730.1
(
Solanum lycopersicum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Solyc02g080730.1
T280052_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G38300
M07056_2.00
Arabidopsis thaliana
WAHATTCYHTH
DADRGAATDTW
Dap-seq
OMalley et al.(2016)
AT2G38300_col_a
0.665
0.723
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc02g080730.1.1
Myb
26
77
RLRWTDDLHRRFVHAVDHLGGVDRATPKMVLQIMNVKGVTISHIKSHLQMYR
Links
Other
Myb/SANT
family TFs
Other
Solanum lycopersicum
TFs
98 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OB06G32040
Oryza brachyantha
OB06G32040
N
0.740
Solyc02g080720.1
Solanum lycopersicum
Solyc02g080720.1
I
0.725
BGIOSGA007064
Oryza indica
BGIOSGA007064
I
0.709
ONIVA02G05430
Oryza nivara
ONIVA02G05430
I
0.709
OPUNC02G04370
Oryza punctata
OPUNC02G04370
I
0.709
ORGLA02G0047700
Oryza glaberrima
ORGLA02G0047700
I
0.709
ORUFI02G05300
Oryza rufipogon
ORUFI02G05300
I
0.709
OS02G0168200
Oryza sativa
OS02G0168200
I
0.709
TCM_030248
Theobroma cacao
TCM_030248
I
0.708
OGLUM02G05030
Oryza glumaepatula
OGLUM02G05030
I
0.703
OLONG_019167
Oryza longistaminata
OLONG_019167
I
0.702
gene19641-v1.0-hybrid
Fragaria vesca
gene19641-v1.0-hybrid
I
0.698
Solyc10g076460.1
Solanum lycopersicum
Solyc10g076460.1
I
0.693
GRMZM2G454449
Zea mays
GRMZM2G454449
N
0.691
LPERR06G20200
Leersia perrieri
LPERR06G20200
N
0.691
OBART06G24290
Oryza barthii
OBART06G24290
N
0.691
OGLUM06G25550
Oryza glumaepatula
OGLUM06G25550
N
0.691
OLONG_026929
Oryza longistaminata
OLONG_026929
N
0.691
OMERI06G24530
Oryza meridionalis
OMERI06G24530
N
0.691
ONIVA06G30620
Oryza nivara
ONIVA06G30620
N
0.691
OPUNC06G22010
Oryza punctata
OPUNC06G22010
N
0.691
ORGLA06G0204400
Oryza glaberrima
ORGLA06G0204400
N
0.691
ORUFI06G26110
Oryza rufipogon
ORUFI06G26110
N
0.691
Sb10g026930
Sorghum bicolor
Sb10g026930
N
0.691
Si007179m.g
Setaria italica
Si007179m.g
N
0.691
Pavir.Da00200
Panicum virgatum
Pavir.Da00200
N
0.691
Pavir.Db00422
Panicum virgatum
Pavir.Db00422
N
0.691
OBART02G05200
Oryza barthii
OBART02G05200
I
0.688
GLYMA09G00685
Glycine max
GLYMA09G00685
I
0.687
GLYMA15G11576
Glycine max
GLYMA15G11576
I
0.687
PRUPE_ppa015662mg
Prunus persica
PRUPE_ppa015662mg
I
0.687
Ca_00645
Cicer arietinum
Ca_00645
I
0.687
29842.m003572
Ricinus communis
29842.m003572
I
0.687
cassava15362.m1
Manihot esculenta
cassava15362.m1
I
0.687
BGIOSGA023442
Oryza indica
BGIOSGA023442
N
0.686
OS06G0670300
Oryza sativa
OS06G0670300
N
0.686
F775_02595
Aegilops tauschii
F775_02595
N
0.685
MLOC_53840
Hordeum vulgare
MLOC_53840
N
0.685
MLOC_53958
Hordeum vulgare
MLOC_53958
N
0.685
MLOC_67085
Hordeum vulgare
MLOC_67085
N
0.685
Traes_7AL_BF6FD97DA
Triticum aestivum
Traes_7AL_BF6FD97DA
N
0.685
Traes_7DL_FEA7D3672
Triticum aestivum
Traes_7DL_FEA7D3672
N
0.685
VIT_00s1624g00010
Vitis vinifera
VIT_00s1624g00010
I
0.684
MTR_2g023580
Medicago truncatula
MTR_2g023580
I
0.679
GLYMA18G43550
Glycine max
GLYMA18G43550
I
0.675
PGSC0003DMG400030032
Solanum tuberosum
PGSC0003DMG400030032
I
0.675
Si039234m.g
Setaria italica
Si039234m.g
I
0.675
Solyc06g051060.2
Solanum lycopersicum
Solyc06g051060.2
I
0.675
Cla018361
Citrullus lanatus
Cla018361
I
0.675
Cucsa.130050
Cucumis sativus
Cucsa.130050
I
0.675
evm.TU.supercontig_120.33
Carica papaya
evm.TU.supercontig_120.33
I
0.675
gene13487-v1.0-hybrid
Fragaria vesca
gene13487-v1.0-hybrid
I
0.675
Gorai.002G265400
Gossypium raimondii
Gorai.002G265400
I
0.675
Gorai.011G291200
Gossypium raimondii
Gorai.011G291200
I
0.675
Gorai.012G117800
Gossypium raimondii
Gorai.012G117800
I
0.675
Pavir.J33581
Panicum virgatum
Pavir.J33581
I
0.675
PK15677.1
Cannabis sativa
PK15677.1
I
0.675
mgf023762m
Mimulus guttatus
mgf023762m
I
0.671
MDP0000179288
Malus domestica
MDP0000179288
I
0.671
Solyc02g080740.1
Solanum lycopersicum
Solyc02g080740.1
N
0.670
Bo4g025360
Brassica oleracea
Bo4g025360
I
0.669
Bra004973
Brassica rapa
Bra004973
I
0.669
GLYMA07G18870
Glycine max
GLYMA07G18870
I
0.669
MTR_7g069660
Medicago truncatula
MTR_7g069660
I
0.669
PRUPE_ppa021179mg
Prunus persica
PRUPE_ppa021179mg
I
0.669
TCM_021628
Theobroma cacao
TCM_021628
I
0.669
Ca_09400
Cicer arietinum
Ca_09400
I
0.669
Pm002861
Prunus mume
Pm002861
I
0.669
Eucgr.J01904
Eucalyptus grandis
Eucgr.J01904
I
0.669
gene21014-v1.0-hybrid
Fragaria vesca
gene21014-v1.0-hybrid
I
0.669
MDP0000272003
Malus domestica
MDP0000272003
I
0.669
SapurV1A.0106s0010
Salix purpurea
SapurV1A.0106s0010
I
0.669
SapurV1A.0566s0220
Salix purpurea
SapurV1A.0566s0220
I
0.669
GLYMA01G31044
Glycine max
GLYMA01G31044
I
0.668
PGSC0003DMG400026644
Solanum tuberosum
PGSC0003DMG400026644
I
0.668
Solyc09g005030.1
Solanum lycopersicum
Solyc09g005030.1
I
0.668
Aquca_004_00431
Aquilegia coerulea
Aquca_004_00431
I
0.668
Cagra.8766s0002
Capsella grandiflora
Cagra.8766s0002
I
0.668
Carubv10013614m.g
Capsella rubella
Carubv10013614m.g
I
0.668
MDP0000133017
Malus domestica
MDP0000133017
I
0.668
Ciclev10032941m.g
Citrus clementina
Ciclev10032941m.g
I
0.667
orange1.1g029903m.g
Citrus sinensis
orange1.1g029903m.g
I
0.667
Thhalv10017090m.g
Eutrema salsugineum
Thhalv10017090m.g
I
0.667
PDK_20s1498711g001
Phoenix dactylifera
PDK_20s1498711g001
I
0.667
SELMODRAFT_228335
Selaginella moellendorffii
SELMODRAFT_228335
I
0.666
SELMODRAFT_270428
Selaginella moellendorffii
SELMODRAFT_270428
I
0.666
AT2G38300
Arabidopsis thaliana
AT2G38300
D
0.665
Bo4g029640
Brassica oleracea
Bo4g029640
I
0.665
Bra005124
Brassica rapa
Bra005124
I
0.665
fgenesh2_kg.4__1901__AT2G38300.1
Arabidopsis lyrata
fgenesh2_kg.4__1901__AT2G38300.1
I
0.665
Bostr.23794s0245
Boechera stricta
Bostr.23794s0245
I
0.665
Cagra.4190s0017
Capsella grandiflora
Cagra.4190s0017
I
0.665
Carubv10023575m.g
Capsella rubella
Carubv10023575m.g
I
0.665
Thhalv10016890m.g
Eutrema salsugineum
Thhalv10016890m.g
I
0.665
F775_03870
Aegilops tauschii
F775_03870
I
0.664
F775_04777
Aegilops tauschii
F775_04777
I
0.664
Traes_7AL_9A1395EC7
Triticum aestivum
Traes_7AL_9A1395EC7
I
0.664
TRIUR3_34172
Triticum urartu
TRIUR3_34172
I
0.664