CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc10g083900.1
(
Solanum lycopersicum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Solyc10g083900.1
T280261_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc10g083900.1.1
Myb
8
55
RGQWLEEEDERLSMMVAVFGERRWDALAKTSGLKRSGKSCRLRWLNYL
Solyc10g083900.1.1
Myb
61
106
HGHITADEERLIIRLQKQFGNKWSKIAKQLPGRTDNEIKNYWRSHL
Links
Other
Myb/SANT
family TFs
Other
Solanum lycopersicum
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400028282
Solanum tuberosum
PGSC0003DMG400028282
N
0.909
Solyc09g008390.1
Solanum lycopersicum
Solyc09g008390.1
I
0.748
evm.TU.supercontig_92.99
Carica papaya
evm.TU.supercontig_92.99
I
0.717
MTR_1g062940
Medicago truncatula
MTR_1g062940
N
0.706
AMTR_s01267p00006490
Amborella trichopoda
AMTR_s01267p00006490
I
0.702
Aquca_030_00038
Aquilegia coerulea
Aquca_030_00038
I
0.702
GLYMA10G06680
Glycine max
GLYMA10G06680
N
0.698
Eucgr.A01648
Eucalyptus grandis
Eucgr.A01648
I
0.694
AtMYB27
Vitis vinifera
VIT_08s0007g04830
I
0.686
Bostr.9544s0002
Boechera stricta
Bostr.9544s0002
I
0.678
Cagra.0612s0043
Capsella grandiflora
Cagra.0612s0043
I
0.678
Carubv10019409m.g
Capsella rubella
Carubv10019409m.g
I
0.678
Lus10023918.g
Linum usitatissimum
Lus10023918.g
N
0.677
PK10274.1
Cannabis sativa
PK10274.1
I
0.676
Bo8g082570
Brassica oleracea
Bo8g082570
I
0.661