CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc11g072060.1
(
Solanum lycopersicum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Solyc11g072060.1
T280288_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATMYB65
M01076_2.00
Arabidopsis thaliana
HAACNRHHN
NDDYNGTTD
PBM
Sullivan et al.(2014)
pTH7084
0.714
0.710
ATMYB65
M07076_2.00
Arabidopsis thaliana
DHHNTAACBGHMW
WKDCVGTTANDDH
Dap-seq
OMalley et al.(2016)
MYB65_col200_a
0.714
0.710
ATMYB65
M07077_2.00
Arabidopsis thaliana
NTAACYGHMWHNDHN
NDHNDWKDCRGTTAN
Dap-seq
OMalley et al.(2016)
MYB65_colamp_a
0.714
0.710
Gam1
M02703_2.00
Hordeum vulgare
NVYAACSGMC
GKCSGTTRBN
SELEX
Mathelier et al.(2014)
MA0034.1
0.687
0.699
Gam1
M11061_2.00
Hordeum vulgare
YAACSRHM
KDYSGTTR
Transfac
Matys et al.(2006)
P$GAMYB_01
0.687
0.699
GAM1_ORYSI
M11055_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GAMYB_Q2
0.687
0.699
MYB33
M02306_2.00
Arabidopsis thaliana
HAACNRHHNN
NNDDYNGTTD
PBM
Weirauch et al.(2014)
pTH8204
0.680
0.699
MYB33
M07120_2.00
Arabidopsis thaliana
NTAACYGWHWH
DWDWCRGTTAN
Dap-seq
OMalley et al.(2016)
MYB33_col_a
0.680
0.699
Q9FR42_TOBAC
M11076_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYBAS1_01
0.675
0.688
myb.Ph3
M02704_2.00
Petunia x hybrida
WAACNGTYW
WRACNGTTW
SELEX
Mathelier et al.(2014)
MA0054.1
0.663
0.688
myb.Ph3
M11070_2.00
Petunia x hybrida
RTAACSGTTTYHW
WDRAAACSGTTAY
Transfac
Matys et al.(2006)
P$MYBPH3_01
0.663
0.688
myb.Ph3
M11071_2.00
Petunia x hybrida
STAACTAACTHHH
DDDAGTTAGTTAS
Transfac
Matys et al.(2006)
P$MYBPH3_02
0.663
0.688
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc11g072060.1.1
Myb
95
142
KGPWLKAEDAILRDYVAEYGEGNWSSVHRRTGLARCGKSCRLRWSNHL
Solyc11g072060.1.1
Myb
148
193
KGAFTQEEEQLIVAMHAQIGNKWARIASEFPGRTDNDIKNFWNTRL
Links
Other
Myb/SANT
family TFs
Other
Solanum lycopersicum
TFs
150 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400027418
Solanum tuberosum
PGSC0003DMG400027418
I
0.818
ATMYB120
Arabidopsis thaliana
AT5G55020
I
0.738
Bra002938
Brassica rapa
Bra002938
I
0.738
Bostr.26833s0761
Boechera stricta
Bostr.26833s0761
I
0.738
Cagra.1629s0073
Capsella grandiflora
Cagra.1629s0073
I
0.738
Carubv10026070m.g
Capsella rubella
Carubv10026070m.g
I
0.738
Thhalv10013018m.g
Eutrema salsugineum
Thhalv10013018m.g
I
0.738
Bo9g119060
Brassica oleracea
Bo9g119060
I
0.732
Ca_20081
Cicer arietinum
Ca_20081
I
0.724
Bo3g021790
Brassica oleracea
Bo3g021790
I
0.718
Bra028997
Brassica rapa
Bra028997
I
0.718
ATMYB65
Arabidopsis thaliana
AT3G11440
D
0.714
ATMYB65
Arabidopsis lyrata
fgenesh2_kg.3__1182__AT3G11440.1
I
0.714
Bostr.19424s1075
Boechera stricta
Bostr.19424s1075
I
0.714
Cagra.1655s0026
Capsella grandiflora
Cagra.1655s0026
I
0.714
Carubv10013393m.g
Capsella rubella
Carubv10013393m.g
I
0.714
Ciclev10010620m.g
Citrus clementina
Ciclev10010620m.g
I
0.714
orange1.1g046419m.g
Citrus sinensis
orange1.1g046419m.g
I
0.714
MTR_3g052430
Medicago truncatula
MTR_3g052430
I
0.711
Thhalv10020455m.g
Eutrema salsugineum
Thhalv10020455m.g
I
0.709
GLYMA08G42955
Glycine max
GLYMA08G42955
I
0.708
POPTR_0001s07330
Populus trichocarpa
POPTR_0001s07330
I
0.708
TCM_044611
Theobroma cacao
TCM_044611
I
0.708
29686.m000890
Ricinus communis
29686.m000890
I
0.708
cassava1461.valid.m1
Manihot esculenta
cassava1461.valid.m1
I
0.708
evm.TU.supercontig_33.151
Carica papaya
evm.TU.supercontig_33.151
I
0.708
Gorai.009G301100
Gossypium raimondii
Gorai.009G301100
I
0.708
Gorai.010G212500
Gossypium raimondii
Gorai.010G212500
I
0.708
Lus10008685.g
Linum usitatissimum
Lus10008685.g
I
0.708
Lus10026142.g
Linum usitatissimum
Lus10026142.g
I
0.708
SapurV1A.0369s0230
Salix purpurea
SapurV1A.0369s0230
I
0.708
SapurV1A.0537s0200
Salix purpurea
SapurV1A.0537s0200
I
0.708
PK15478.1
Cannabis sativa
PK15478.1
I
0.706
Bo5g136570
Brassica oleracea
Bo5g136570
I
0.705
Bra034842
Brassica rapa
Bra034842
I
0.705
GLYMA08G42920
Glycine max
GLYMA08G42920
I
0.704
MYB33
Arabidopsis lyrata
fgenesh2_kg.6__546__AT5G06100.3
I
0.700
mgf002965m
Mimulus guttatus
mgf002965m
I
0.700
GLYMA18G10921
Glycine max
GLYMA18G10921
I
0.699
PGSC0003DMG400013897
Solanum tuberosum
PGSC0003DMG400013897
I
0.699
Bostr.13129s0364
Boechera stricta
Bostr.13129s0364
I
0.699
Cagra.2117s0052
Capsella grandiflora
Cagra.2117s0052
I
0.699
Carubv10000715m.g
Capsella rubella
Carubv10000715m.g
I
0.699
Thhalv10013329m.g
Eutrema salsugineum
Thhalv10013329m.g
I
0.699
LjT02G13.10.nc
Lotus japonicus
LjT02G13.10.nc
I
0.699
Bo1g141040
Brassica oleracea
Bo1g141040
I
0.697
Bra002042
Brassica rapa
Bra002042
I
0.697
GSMUA_Achr1G17150_001
Musa acuminata
GSMUA_Achr1G17150_001
I
0.696
Thhalv10025350m.g
Eutrema salsugineum
Thhalv10025350m.g
I
0.696
GSMUA_Achr4G23690_001
Musa acuminata
GSMUA_Achr4G23690_001
I
0.695
MYB97
Arabidopsis thaliana
AT4G26930
I
0.694
MYB97
Arabidopsis lyrata
fgenesh2_kg.7__1539__AT4G26930.1
I
0.694
POPTR_0003s18900
Populus trichocarpa
POPTR_0003s18900
I
0.691
Lus10026787.g
Linum usitatissimum
Lus10026787.g
I
0.691
Lus10036103.g
Linum usitatissimum
Lus10036103.g
I
0.691
cassava40302.m1
Manihot esculenta
cassava40302.m1
I
0.689
GAM1
Oryza indica
BGIOSGA004670
I
0.687
BRADI2G53010
Brachypodium distachyon
BRADI2G53010
I
0.687
F775_28392
Aegilops tauschii
F775_28392
I
0.687
GAM1_ORYSI
Oryza sativa
GAM1_ORYSI
D
0.687
GRMZM2G139688
Zea mays
GRMZM2G139688
I
0.687
OB01G43550
Oryza brachyantha
OB01G43550
I
0.687
OBART01G34660
Oryza barthii
OBART01G34660
I
0.687
OGLUM01G20920
Oryza glumaepatula
OGLUM01G20920
I
0.687
OLONG_020610
Oryza longistaminata
OLONG_020610
I
0.687
OMERI01G31990
Oryza meridionalis
OMERI01G31990
I
0.687
GAMYB
Oryza sativa
OS01G0812000
I
0.687
Gam1
Hordeum vulgare
Q96464_HORVU
D
0.687
Si000907m.g
Setaria italica
Si000907m.g
I
0.687
TRAES3BF027700010CFD_g
Triticum aestivum
TRAES3BF027700010CFD_g
I
0.687
TRIUR3_27104
Triticum urartu
TRIUR3_27104
I
0.687
Ciclev10000756m.g
Citrus clementina
Ciclev10000756m.g
I
0.687
orange1.1g011938m.g
Citrus sinensis
orange1.1g011938m.g
I
0.687
Pavir.Ea03206
Panicum virgatum
Pavir.Ea03206
I
0.687
Cla005406
Citrullus lanatus
Cla005406
I
0.686
Cucsa.060080
Cucumis sativus
Cucsa.060080
I
0.686
GLYMA12G31950
Glycine max
GLYMA12G31950
I
0.685
PRUPE_ppa003628mg
Prunus persica
PRUPE_ppa003628mg
I
0.685
Pm016605
Prunus mume
Pm016605
I
0.685
Eucgr.G03183
Eucalyptus grandis
Eucgr.G03183
I
0.685
gene00431-v1.0-hybrid
Fragaria vesca
gene00431-v1.0-hybrid
I
0.685
cassava44767.m1
Manihot esculenta
cassava44767.m1
I
0.684
MTR_3g052450
Medicago truncatula
MTR_3g052450
I
0.682
SELMODRAFT_128781
Selaginella moellendorffii
SELMODRAFT_128781
I
0.682
SELMODRAFT_81112
Selaginella moellendorffii
SELMODRAFT_81112
I
0.682
VIT_13s0067g01630
Vitis vinifera
VIT_13s0067g01630
I
0.682
Gorai.012G022000
Gossypium raimondii
Gorai.012G022000
I
0.682
PRUPE_ppa022465mg
Prunus persica
PRUPE_ppa022465mg
I
0.681
gene03321-v1.0-hybrid
Fragaria vesca
gene03321-v1.0-hybrid
I
0.681
MYB33
Arabidopsis thaliana
AT5G06100
D
0.680
chr3.CM0005.370.nc
Lotus japonicus
chr3.CM0005.370.nc
I
0.680
PGSC0003DMG400022689
Solanum tuberosum
PGSC0003DMG400022689
I
0.679
Solyc01g009070.2
Solanum lycopersicum
Solyc01g009070.2
I
0.679
GLYMA13G25716
Glycine max
GLYMA13G25716
I
0.678
GSMUA_AchrUn_randomG15100_001
Musa acuminata
GSMUA_AchrUn_randomG15100_001
I
0.676
Ca_25013
Cicer arietinum
Ca_25013
I
0.676
evm.TU.supercontig_34.210
Carica papaya
evm.TU.supercontig_34.210
I
0.676
MDP0000147309
Malus domestica
MDP0000147309
I
0.676
MDP0000151688
Malus domestica
MDP0000151688
I
0.676
MDP0000175835
Malus domestica
MDP0000175835
I
0.676
MDP0000176798
Malus domestica
MDP0000176798
I
0.676
Pavir.Eb03517
Panicum virgatum
Pavir.Eb03517
I
0.676
MLOC_6041
Hordeum vulgare
MLOC_6041
I
0.675
Q9FR42_TOBAC
Nicotiana tabacum
Q9FR42_TOBAC
D
0.675
SELMODRAFT_117411
Selaginella moellendorffii
SELMODRAFT_117411
I
0.673
SELMODRAFT_84369
Selaginella moellendorffii
SELMODRAFT_84369
I
0.673
Cla013880
Citrullus lanatus
Cla013880
I
0.673
Cucsa.364400
Cucumis sativus
Cucsa.364400
I
0.673
mgf010934m
Mimulus guttatus
mgf010934m
I
0.673
mgf019173m
Mimulus guttatus
mgf019173m
I
0.673
PGSC0003DMG400005918
Solanum tuberosum
PGSC0003DMG400005918
I
0.672
PGSC0003DMG400028949
Solanum tuberosum
PGSC0003DMG400028949
I
0.672
Solyc06g073640.2
Solanum lycopersicum
Solyc06g073640.2
I
0.672
Solyc07g052300.2
Solanum lycopersicum
Solyc07g052300.2
I
0.672
mgf025568m
Mimulus guttatus
mgf025568m
I
0.672
Bra035547
Brassica rapa
Bra035547
I
0.671
F775_23034
Aegilops tauschii
F775_23034
I
0.671
MTR_8g042410
Medicago truncatula
MTR_8g042410
I
0.671
TRIUR3_20797
Triticum urartu
TRIUR3_20797
I
0.671
evm.TU.supercontig_12.292
Carica papaya
evm.TU.supercontig_12.292
I
0.671
Sb03g037680
Sorghum bicolor
Sb03g037680
I
0.670
Ca_21739
Cicer arietinum
Ca_21739
I
0.670
mgf020500m
Mimulus guttatus
mgf020500m
I
0.670
SapurV1A.1951s0020
Salix purpurea
SapurV1A.1951s0020
I
0.670
GLYMA13G38521
Glycine max
GLYMA13G38521
I
0.668
POPTR_0009s02380
Populus trichocarpa
POPTR_0009s02380
I
0.667
PRUPE_ppa017451mg
Prunus persica
PRUPE_ppa017451mg
I
0.667
Pm015094
Prunus mume
Pm015094
I
0.667
29785.m000932
Ricinus communis
29785.m000932
I
0.667
cassava30977.valid.m1
Manihot esculenta
cassava30977.valid.m1
I
0.667
AMTR_s00037p00177500
Amborella trichopoda
AMTR_s00037p00177500
I
0.666
Aquca_005_00025
Aquilegia coerulea
Aquca_005_00025
I
0.666
gene03323-v1.0-hybrid
Fragaria vesca
gene03323-v1.0-hybrid
I
0.666
MDP0000179306
Malus domestica
MDP0000179306
I
0.666
OB03G32840
Oryza brachyantha
OB03G32840
I
0.664
OBART03G24120
Oryza barthii
OBART03G24120
I
0.664
OGLUM03G24880
Oryza glumaepatula
OGLUM03G24880
I
0.664
OLONG_025057
Oryza longistaminata
OLONG_025057
I
0.664
OMERI03G21920
Oryza meridionalis
OMERI03G21920
I
0.664
ONIVA04G15310
Oryza nivara
ONIVA04G15310
I
0.664
OPUNC03G22220
Oryza punctata
OPUNC03G22220
I
0.664
ORGLA03G0224700
Oryza glaberrima
ORGLA03G0224700
I
0.664
ORUFI03G24730
Oryza rufipogon
ORUFI03G24730
I
0.664
OS03G0578900
Oryza sativa
OS03G0578900
I
0.664
myb.Ph3
Petunia x hybrida
Q02994_PETHY
D
0.663
AMTR_s00038p00150140
Amborella trichopoda
AMTR_s00038p00150140
I
0.662
MYB101
Vitis vinifera
VIT_12s0059g00700
I
0.661
Ca_15422
Cicer arietinum
Ca_15422
I
0.661
Cla007782
Citrullus lanatus
Cla007782
I
0.661
Cucsa.148580
Cucumis sativus
Cucsa.148580
I
0.661