CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_033645
(
Theobroma cacao
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
TCM_033645
T280597_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATY53
M07078_2.00
Arabidopsis thaliana
YBYACCWAMCDHHNNNNNNNN
NNNNNNNNDDHGKTWGGTRVR
Dap-seq
OMalley et al.(2016)
MYB67_col_a
0.813
0.892
MYB107
M07061_2.00
Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN
Dap-seq
OMalley et al.(2016)
MYB107_col_a
0.673
0.699
MYB107
M07062_2.00
Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW
Dap-seq
OMalley et al.(2016)
MYB107_colamp_a
0.673
0.699
AtMYB17
M07099_2.00
Arabidopsis thaliana
YYYACCWACCWHHHH
DDDDWGGTWGGTRRR
Dap-seq
OMalley et al.(2016)
MYB17_colamp_a
0.667
0.677
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOY14300
Myb
13
60
RGLWSPEEDDKLIKHITAHGHGSWSSVPKLAGLQRCGKSCRLRWINYL
EOY14300
Myb
66
111
RGSFTADEEQIIIDVHRILGNRWAQIAKHLPGRTDNEVKNFWNSCI
Links
Other
Myb/SANT
family TFs
Other
Theobroma cacao
TFs
216 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.004G268300
Gossypium raimondii
Gorai.004G268300
I
0.876
Ciclev10006752m.g
Citrus clementina
Ciclev10006752m.g
I
0.867
orange1.1g036087m.g
Citrus sinensis
orange1.1g036087m.g
I
0.867
cassava33147.m1
Manihot esculenta
cassava33147.m1
I
0.859
ATY53
Vitis vinifera
VIT_19s0085g00940
I
0.854
Pm010927
Prunus mume
Pm010927
I
0.844
POPTR_0008s08110
Populus trichocarpa
POPTR_0008s08110
I
0.831
SapurV1A.0149s0490
Salix purpurea
SapurV1A.0149s0490
I
0.831
SapurV1A.4138s0010
Salix purpurea
SapurV1A.4138s0010
I
0.831
30125.m001257
Ricinus communis
30125.m001257
I
0.830
Bostr.3640s0047
Boechera stricta
Bostr.3640s0047
I
0.830
cassava44228.m1
Manihot esculenta
cassava44228.m1
I
0.820
ATY53
Arabidopsis lyrata
scaffold_301452.1
I
0.815
ATY53
Arabidopsis thaliana
AT3G12720
D
0.813
Cagra.5641s0037
Capsella grandiflora
Cagra.5641s0037
I
0.813
Carubv10015099m.g
Capsella rubella
Carubv10015099m.g
I
0.813
TCM_005977
Theobroma cacao
TCM_005977
I
0.812
Ciclev10018009m.g
Citrus clementina
Ciclev10018009m.g
I
0.812
orange1.1g039070m.g
Citrus sinensis
orange1.1g039070m.g
I
0.812
PRUPE_ppa022859mg
Prunus persica
PRUPE_ppa022859mg
I
0.810
MDP0000157506
Malus domestica
MDP0000157506
I
0.809
GLYMA08G17371
Glycine max
GLYMA08G17371
I
0.808
MTR_2g064160
Medicago truncatula
MTR_2g064160
I
0.808
cassava26068.m1
Manihot esculenta
cassava26068.m1
I
0.808
Bo5g133210
Brassica oleracea
Bo5g133210
I
0.806
Bra034738
Brassica rapa
Bra034738
I
0.806
27956.m000359
Ricinus communis
27956.m000359
I
0.806
Thhalv10022066m.g
Eutrema salsugineum
Thhalv10022066m.g
I
0.806
Eucgr.E04323
Eucalyptus grandis
Eucgr.E04323
I
0.805
SapurV1A.0122s0490
Salix purpurea
SapurV1A.0122s0490
I
0.803
LjT35F06.10.nd
Lotus japonicus
LjT35F06.10.nd
I
0.801
Bo1g138990
Brassica oleracea
Bo1g138990
I
0.800
Bra039339
Brassica rapa
Bra039339
I
0.800
POPTR_0001s12240
Populus trichocarpa
POPTR_0001s12240
I
0.798
MDP0000226667
Malus domestica
MDP0000226667
I
0.796
SapurV1A.0236s0090
Salix purpurea
SapurV1A.0236s0090
I
0.788
PRUPE_ppa026618mg
Prunus persica
PRUPE_ppa026618mg
I
0.787
Pm010847
Prunus mume
Pm010847
I
0.787
POPTR_0003s15440
Populus trichocarpa
POPTR_0003s15440
I
0.785
gene19934-v1.0-hybrid
Fragaria vesca
gene19934-v1.0-hybrid
I
0.782
Aquca_030_00294
Aquilegia coerulea
Aquca_030_00294
I
0.781
gene19715-v1.0-hybrid
Fragaria vesca
gene19715-v1.0-hybrid
I
0.781
cassava11527.m1
Manihot esculenta
cassava11527.m1
I
0.779
SapurV1A.0093s0250
Salix purpurea
SapurV1A.0093s0250
I
0.776
Solyc02g082040.2
Solanum lycopersicum
Solyc02g082040.2
I
0.773
mgf026023m
Mimulus guttatus
mgf026023m
I
0.771
GSMUA_Achr8G03510_001
Musa acuminata
GSMUA_Achr8G03510_001
I
0.764
GLYMA15G41810
Glycine max
GLYMA15G41810
I
0.763
chr3.CM0049.330.nc
Lotus japonicus
chr3.CM0049.330.nc
I
0.754
VIT_01s0010g00410
Vitis vinifera
VIT_01s0010g00410
I
0.751
GRMZM2G172327
Zea mays
GRMZM2G172327
I
0.745
Sb02g033830
Sorghum bicolor
Sb02g033830
I
0.745
Si030152m.g
Setaria italica
Si030152m.g
I
0.745
Pavir.Ba00923
Panicum virgatum
Pavir.Ba00923
I
0.745
Pavir.Bb02786
Panicum virgatum
Pavir.Bb02786
I
0.745
Solyc10g005240.2
Solanum lycopersicum
Solyc10g005240.2
I
0.743
F775_00835
Aegilops tauschii
F775_00835
I
0.742
MLOC_56753
Hordeum vulgare
MLOC_56753
I
0.742
Traes_2AS_40FA27AE7
Triticum aestivum
Traes_2AS_40FA27AE7
I
0.742
TRIUR3_26358
Triticum urartu
TRIUR3_26358
I
0.742
GSMUA_Achr9G11190_001
Musa acuminata
GSMUA_Achr9G11190_001
I
0.738
POPTR_0010s18170
Populus trichocarpa
POPTR_0010s18170
I
0.733
gene06920-v1.0-hybrid
Fragaria vesca
gene06920-v1.0-hybrid
I
0.732
PGSC0003DMG400007325
Solanum tuberosum
PGSC0003DMG400007325
I
0.728
GLYMA15G02955
Glycine max
GLYMA15G02955
I
0.725
GSMUA_Achr9G25110_001
Musa acuminata
GSMUA_Achr9G25110_001
I
0.722
MTR_8g017540
Medicago truncatula
MTR_8g017540
I
0.722
Traes_2BS_CA02DC5B2
Triticum aestivum
Traes_2BS_CA02DC5B2
I
0.718
PK29171.1
Cannabis sativa
PK29171.1
I
0.717
AMTR_s00032p00221670
Amborella trichopoda
AMTR_s00032p00221670
I
0.715
BGIOSGA024270
Oryza indica
BGIOSGA024270
I
0.715
GLYMA07G01050
Glycine max
GLYMA07G01050
I
0.715
GLYMA08G20440
Glycine max
GLYMA08G20440
I
0.715
GLYMA13G42431
Glycine max
GLYMA13G42431
I
0.715
LPERR07G12760
Leersia perrieri
LPERR07G12760
I
0.715
MTR_2g099740
Medicago truncatula
MTR_2g099740
I
0.715
OBART07G15150
Oryza barthii
OBART07G15150
I
0.715
OMERI07G11910
Oryza meridionalis
OMERI07G11910
I
0.715
OPUNC07G13970
Oryza punctata
OPUNC07G13970
I
0.715
ORGLA07G0124200
Oryza glaberrima
ORGLA07G0124200
I
0.715
ORUFI07G15620
Oryza rufipogon
ORUFI07G15620
I
0.715
OS07G0497500
Oryza sativa
OS07G0497500
I
0.715
PRUPE_ppa015032mg
Prunus persica
PRUPE_ppa015032mg
I
0.715
TCM_029065
Theobroma cacao
TCM_029065
I
0.715
Ca_02730
Cicer arietinum
Ca_02730
I
0.715
Ca_10069
Cicer arietinum
Ca_10069
I
0.715
Pm013322
Prunus mume
Pm013322
I
0.715
Gorai.011G063900
Gossypium raimondii
Gorai.011G063900
I
0.715
Lus10015608.g
Linum usitatissimum
Lus10015608.g
I
0.715
MDP0000148894
Malus domestica
MDP0000148894
I
0.715
PK22855.1
Cannabis sativa
PK22855.1
I
0.715
BRADI1G61397
Brachypodium distachyon
BRADI1G61397
I
0.713
MTR_8g017440
Medicago truncatula
MTR_8g017440
I
0.712
MYB26
Populus trichocarpa
POPTR_0001s20370
I
0.712
cassava176.valid.m1
Manihot esculenta
cassava176.valid.m1
I
0.712
SapurV1A.0177s0130
Salix purpurea
SapurV1A.0177s0130
I
0.712
MYB26
Vitis vinifera
VIT_09s0002g01670
I
0.711
Aquca_020_00444
Aquilegia coerulea
Aquca_020_00444
I
0.711
Cla012793
Citrullus lanatus
Cla012793
I
0.710
Cucsa.340960
Cucumis sativus
Cucsa.340960
I
0.710
PGSC0003DMG400037038
Solanum tuberosum
PGSC0003DMG400037038
I
0.708
Solyc03g121740.1
Solanum lycopersicum
Solyc03g121740.1
I
0.708
MYB26
Arabidopsis thaliana
AT3G13890
I
0.706
Bo1g134790
Brassica oleracea
Bo1g134790
I
0.706
Bra021515
Brassica rapa
Bra021515
I
0.706
F775_17110
Aegilops tauschii
F775_17110
I
0.706
MYB26
Arabidopsis lyrata
fgenesh2_kg.3__1496__AT3G13890.1
I
0.706
GRMZM2G088783
Zea mays
GRMZM2G088783
I
0.706
MLOC_18177
Hordeum vulgare
MLOC_18177
I
0.706
Traes_3AL_E3BF20F0D
Triticum aestivum
Traes_3AL_E3BF20F0D
I
0.706
TRIUR3_25230
Triticum urartu
TRIUR3_25230
I
0.706
Bostr.28625s0318
Boechera stricta
Bostr.28625s0318
I
0.706
Cagra.0736s0026
Capsella grandiflora
Cagra.0736s0026
I
0.706
Carubv10015767m.g
Capsella rubella
Carubv10015767m.g
I
0.706
Eucgr.F03143
Eucalyptus grandis
Eucgr.F03143
I
0.706
Thhalv10021042m.g
Eutrema salsugineum
Thhalv10021042m.g
I
0.706
Gorai.009G142200
Gossypium raimondii
Gorai.009G142200
I
0.704
cassava34928.m1
Manihot esculenta
cassava34928.m1
I
0.703
SapurV1A.0538s0150
Salix purpurea
SapurV1A.0538s0150
I
0.702
SapurV1A.1869s0040
Salix purpurea
SapurV1A.1869s0040
I
0.702
MTR_8g017500
Medicago truncatula
MTR_8g017500
I
0.697
AMTR_s00079p00143780
Amborella trichopoda
AMTR_s00079p00143780
I
0.692
BRADI1G26920
Brachypodium distachyon
BRADI1G26920
I
0.692
OB07G21090
Oryza brachyantha
OB07G21090
I
0.691
Ciclev10027201m.g
Citrus clementina
Ciclev10027201m.g
I
0.691
BGIOSGA004306
Oryza indica
BGIOSGA004306
I
0.688
OLONG_008660
Oryza longistaminata
OLONG_008660
I
0.688
ORGLA01G0234600
Oryza glaberrima
ORGLA01G0234600
I
0.688
OS01G0709000
Oryza sativa
OS01G0709000
I
0.688
evm.TU.supercontig_25.69
Carica papaya
evm.TU.supercontig_25.69
I
0.685
Solyc04g056310.2
Solanum lycopersicum
Solyc04g056310.2
I
0.683
Cagra.10702s0006
Capsella grandiflora
Cagra.10702s0006
I
0.683
Carubv10020714m.g
Capsella rubella
Carubv10020714m.g
I
0.683
Eucgr.I00442
Eucalyptus grandis
Eucgr.I00442
I
0.683
GSMUA_Achr3G28540_001
Musa acuminata
GSMUA_Achr3G28540_001
I
0.682
MTR_8g017350
Medicago truncatula
MTR_8g017350
I
0.682
GLYMA06G10840
Glycine max
GLYMA06G10840
I
0.680
MTR_3g074520
Medicago truncatula
MTR_3g074520
I
0.680
Eucgr.B00023
Eucalyptus grandis
Eucgr.B00023
I
0.680
BRADI2G47887
Brachypodium distachyon
BRADI2G47887
I
0.679
LPERR01G24370
Leersia perrieri
LPERR01G24370
I
0.679
OB01G37410
Oryza brachyantha
OB01G37410
I
0.679
OB06G17320
Oryza brachyantha
OB06G17320
I
0.679
OPUNC01G28160
Oryza punctata
OPUNC01G28160
I
0.679
Sb03g032600
Sorghum bicolor
Sb03g032600
I
0.679
Pavir.Ea02594
Panicum virgatum
Pavir.Ea02594
I
0.679
MTR_8g017340
Medicago truncatula
MTR_8g017340
I
0.678
Sb02g040480
Sorghum bicolor
Sb02g040480
I
0.677
GLYMA02G13770
Glycine max
GLYMA02G13770
I
0.676
GSMUA_Achr6G35800_001
Musa acuminata
GSMUA_Achr6G35800_001
I
0.676
Si002319m.g
Setaria italica
Si002319m.g
I
0.676
Lus10038395.g
Linum usitatissimum
Lus10038395.g
I
0.674
MYB107
Arabidopsis thaliana
AT3G02940
D
0.673
Bo1g155040
Brassica oleracea
Bo1g155040
I
0.673
Bra021382
Brassica rapa
Bra021382
I
0.673
Bra032028
Brassica rapa
Bra032028
I
0.673
MYB107
Arabidopsis lyrata
fgenesh2_kg.3__241__AT3G02940.1
I
0.673
Bostr.19046s0006
Boechera stricta
Bostr.19046s0006
I
0.673
Cagra.1194s0007
Capsella grandiflora
Cagra.1194s0007
I
0.673
Carubv10016434m.g
Capsella rubella
Carubv10016434m.g
I
0.673
Thhalv10022405m.g
Eutrema salsugineum
Thhalv10022405m.g
I
0.673
LPERR06G07150
Leersia perrieri
LPERR06G07150
I
0.672
GLYMA04G11040
Glycine max
GLYMA04G11040
I
0.671
Bo5g150350
Brassica oleracea
Bo5g150350
I
0.668
AtMYB17
Arabidopsis thaliana
AT3G61250
D
0.667
BGIOSGA020297
Oryza indica
BGIOSGA020297
I
0.667
AtMYB17
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5002102
I
0.667
OMERI05G21780
Oryza meridionalis
OMERI05G21780
I
0.667
OPUNC01G19230
Oryza punctata
OPUNC01G19230
I
0.667
ORGLA05G0210500
Oryza glaberrima
ORGLA05G0210500
I
0.667
OS05G0543600
Oryza sativa
OS05G0543600
I
0.667
Sb03g024500
Sorghum bicolor
Sb03g024500
I
0.667
Pavir.J18139
Panicum virgatum
Pavir.J18139
I
0.667
Pavir.J20716
Panicum virgatum
Pavir.J20716
I
0.667
GSMUA_Achr1G25120_001
Musa acuminata
GSMUA_Achr1G25120_001
I
0.666
PGSC0003DMG400000027
Solanum tuberosum
PGSC0003DMG400000027
I
0.666
BGIOSGA010658
Oryza indica
BGIOSGA010658
I
0.665
BGIOSGA026208
Oryza indica
BGIOSGA026208
I
0.665
F775_18488
Aegilops tauschii
F775_18488
I
0.665
GRMZM2G147698
Zea mays
GRMZM2G147698
I
0.665
LPERR07G20400
Leersia perrieri
LPERR07G20400
I
0.665
MLOC_37780
Hordeum vulgare
MLOC_37780
I
0.665
MLOC_39554
Hordeum vulgare
MLOC_39554
I
0.665
OGLUM07G23470
Oryza glumaepatula
OGLUM07G23470
I
0.665
OMERI03G17220
Oryza meridionalis
OMERI03G17220
I
0.665
OMERI07G19830
Oryza meridionalis
OMERI07G19830
I
0.665
ONIVA02G07540
Oryza nivara
ONIVA02G07540
I
0.665
OPUNC07G22080
Oryza punctata
OPUNC07G22080
I
0.665
ORGLA07G0264800
Oryza glaberrima
ORGLA07G0264800
I
0.665
ORUFI07G24600
Oryza rufipogon
ORUFI07G24600
I
0.665
Sb01g034270
Sorghum bicolor
Sb01g034270
I
0.665
Si029872m.g
Setaria italica
Si029872m.g
I
0.665
Si036638m.g
Setaria italica
Si036638m.g
I
0.665
Traes_7AL_0BCF482E8
Triticum aestivum
Traes_7AL_0BCF482E8
I
0.665
Traes_7DL_AD4395F8F
Triticum aestivum
Traes_7DL_AD4395F8F
I
0.665
TRIUR3_20789
Triticum urartu
TRIUR3_20789
I
0.665
Pavir.J03230
Panicum virgatum
Pavir.J03230
I
0.665
BRADI2G40620
Brachypodium distachyon
BRADI2G40620
I
0.664
GRMZM2G064744
Zea mays
GRMZM2G064744
I
0.664
GRMZM2G150841
Zea mays
GRMZM2G150841
I
0.664
Solyc01g094360.2
Solanum lycopersicum
Solyc01g094360.2
I
0.663
BGIOSGA008700
Oryza indica
BGIOSGA008700
I
0.662
GSMUA_Achr10G19130_001
Musa acuminata
GSMUA_Achr10G19130_001
I
0.662
GSMUA_Achr11G00430_001
Musa acuminata
GSMUA_Achr11G00430_001
I
0.662
GSMUA_Achr2G18440_001
Musa acuminata
GSMUA_Achr2G18440_001
I
0.662
GSMUA_Achr5G18080_001
Musa acuminata
GSMUA_Achr5G18080_001
I
0.662
GSMUA_Achr5G18400_001
Musa acuminata
GSMUA_Achr5G18400_001
I
0.662
GSMUA_Achr7G17250_001
Musa acuminata
GSMUA_Achr7G17250_001
I
0.662
GSMUA_Achr8G18730_001
Musa acuminata
GSMUA_Achr8G18730_001
I
0.662
OB02G32960
Oryza brachyantha
OB02G32960
I
0.662
ORUFI02G27000
Oryza rufipogon
ORUFI02G27000
I
0.662
OS02G0641900
Oryza sativa
OS02G0641900
I
0.662
VIT_05s0020g01100
Vitis vinifera
VIT_05s0020g01100
I
0.662
evm.TU.supercontig_752.1
Carica papaya
evm.TU.supercontig_752.1
I
0.662
MDP0000158937
Malus domestica
MDP0000158937
I
0.662
Sb09g027200
Sorghum bicolor
Sb09g027200
I
0.661