CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_2AL_41B71F83C
(
Triticum aestivum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Traes_2AL_41B71F83C
T280861_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK28187.1
M01286_2.00
Cannabis sativa
TACCTACC
GGTAGGTA
PBM
Lambert et al.(2019)
pTH11305
0.684
0.753
AtMYB74
M07104_2.00
Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB74_colamp_a
0.681
0.731
AtMYB74
M07105_2.00
Arabidopsis thaliana
BYHYACCTAMYHHH
DDDRKTAGGTRDRV
Dap-seq
OMalley et al.(2016)
MYB74_col
0.681
0.731
AtMYB41
M07109_2.00
Arabidopsis thaliana
DHDBBYYACCTAMYW
WRKTAGGTRRVVHDH
Dap-seq
OMalley et al.(2016)
MYB41_col_a
0.676
0.710
AtMYB17
M07099_2.00
Arabidopsis thaliana
YYYACCWACCWHHHH
DDDDWGGTWGGTRRR
Dap-seq
OMalley et al.(2016)
MYB17_colamp_a
0.664
0.753
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_2AL_41B71F83C.1
Myb
15
62
KGPWTPEEDKLLVDYVQANAPGNWRMLPKLAGLNRCGKSCRLRWTNYL
Traes_2AL_41B71F83C.1
Myb
68
113
RGPFTAEEHKSILQLHAIVGNKWSMIAAQLPGRTDNEIKNYWNTNL
Links
Other
Myb/SANT
family TFs
Other
Triticum aestivum
TFs
187 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_68698
Hordeum vulgare
MLOC_68698
I
0.892
Traes_2BL_79F1B50DF
Triticum aestivum
Traes_2BL_79F1B50DF
I
0.892
Traes_2DL_5A0300CE0
Triticum aestivum
Traes_2DL_5A0300CE0
I
0.892
BRADI5G16707
Brachypodium distachyon
BRADI5G16707
I
0.859
Pavir.Ga01101
Panicum virgatum
Pavir.Ga01101
I
0.858
Pavir.Gb00736
Panicum virgatum
Pavir.Gb00736
I
0.858
BGIOSGA016822
Oryza indica
BGIOSGA016822
I
0.837
OB04G26860
Oryza brachyantha
OB04G26860
I
0.837
ONIVA04G17990
Oryza nivara
ONIVA04G17990
I
0.837
ORGLA04G0169000
Oryza glaberrima
ORGLA04G0169000
I
0.837
ORUFI04G21320
Oryza rufipogon
ORUFI04G21320
I
0.837
Sb06g023620
Sorghum bicolor
Sb06g023620
I
0.825
BGIOSGA008700
Oryza indica
BGIOSGA008700
I
0.799
OB02G32960
Oryza brachyantha
OB02G32960
I
0.799
ORUFI02G27000
Oryza rufipogon
ORUFI02G27000
I
0.799
OS02G0641900
Oryza sativa
OS02G0641900
I
0.799
Si017934m.g
Setaria italica
Si017934m.g
I
0.782
Pavir.Ab02419
Panicum virgatum
Pavir.Ab02419
I
0.782
Pavir.Aa01232
Panicum virgatum
Pavir.Aa01232
I
0.779
GRMZM2G111045
Zea mays
GRMZM2G111045
I
0.769
GRMZM2G123202
Zea mays
GRMZM2G123202
N
0.769
Eucgr.A01772
Eucalyptus grandis
Eucgr.A01772
I
0.755
MLOC_39554
Hordeum vulgare
MLOC_39554
I
0.753
GRMZM2G040924
Zea mays
GRMZM2G040924
I
0.752
Sb04g033670
Sorghum bicolor
Sb04g033670
I
0.752
POPTR_0013s14480
Populus trichocarpa
POPTR_0013s14480
I
0.750
F775_27854
Aegilops tauschii
F775_27854
I
0.734
Traes_6DL_41CBE9959
Triticum aestivum
Traes_6DL_41CBE9959
I
0.734
Gorai.005G206300
Gossypium raimondii
Gorai.005G206300
I
0.730
GLYMA06G45460
Glycine max
GLYMA06G45460
I
0.725
TCM_007904
Theobroma cacao
TCM_007904
I
0.725
AtMYB41
Vitis vinifera
VIT_12s0134g00570
I
0.725
cassava2558.valid.m1
Manihot esculenta
cassava2558.valid.m1
I
0.725
cassava39892.m1
Manihot esculenta
cassava39892.m1
I
0.725
Ciclev10017668m.g
Citrus clementina
Ciclev10017668m.g
I
0.725
orange1.1g035629m.g
Citrus sinensis
orange1.1g035629m.g
I
0.725
GLYMA12G32610
Glycine max
GLYMA12G32610
I
0.723
GLYMA12G11600
Glycine max
GLYMA12G11600
I
0.721
GSMUA_Achr11G04090_001
Musa acuminata
GSMUA_Achr11G04090_001
I
0.720
Ca_14119
Cicer arietinum
Ca_14119
I
0.720
chr3.CM0711.160.nd
Lotus japonicus
chr3.CM0711.160.nd
I
0.720
SapurV1A.0048s0210
Salix purpurea
SapurV1A.0048s0210
I
0.717
Gorai.008G151400
Gossypium raimondii
Gorai.008G151400
I
0.714
MDP0000468201
Malus domestica
MDP0000468201
I
0.711
MDP0000710259
Malus domestica
MDP0000710259
I
0.711
Bo6g077600
Brassica oleracea
Bo6g077600
I
0.707
Aquca_013_00356
Aquilegia coerulea
Aquca_013_00356
I
0.707
BRADI3G49987
Brachypodium distachyon
BRADI3G49987
I
0.704
GLYMA13G37820
Glycine max
GLYMA13G37820
I
0.702
MTR_2g089620
Medicago truncatula
MTR_2g089620
I
0.702
GLYMA02G12242
Glycine max
GLYMA02G12242
I
0.700
BRADI1G51747
Brachypodium distachyon
BRADI1G51747
I
0.699
Si006790m.g
Setaria italica
Si006790m.g
I
0.699
Pavir.J23197
Panicum virgatum
Pavir.J23197
I
0.699
Cla007838
Citrullus lanatus
Cla007838
I
0.698
Cucsa.148040
Cucumis sativus
Cucsa.148040
I
0.698
PGSC0003DMG400018331
Solanum tuberosum
PGSC0003DMG400018331
I
0.695
PGSC0003DMG400026628
Solanum tuberosum
PGSC0003DMG400026628
I
0.695
Solyc07g054840.2
Solanum lycopersicum
Solyc07g054840.2
I
0.695
Solyc10g008700.1
Solanum lycopersicum
Solyc10g008700.1
I
0.695
29983.m003281
Ricinus communis
29983.m003281
I
0.695
Bo1g051220
Brassica oleracea
Bo1g051220
I
0.693
Bra026281
Brassica rapa
Bra026281
I
0.693
evm.TU.supercontig_18.232
Carica papaya
evm.TU.supercontig_18.232
I
0.693
Thhalv10027463m.g
Eutrema salsugineum
Thhalv10027463m.g
I
0.693
PRUPE_ppa016708mg
Prunus persica
PRUPE_ppa016708mg
I
0.691
Pm015309
Prunus mume
Pm015309
I
0.691
Pavir.Da02398
Panicum virgatum
Pavir.Da02398
I
0.691
GSMUA_Achr5G12230_001
Musa acuminata
GSMUA_Achr5G12230_001
I
0.690
Cagra.1981s0006
Capsella grandiflora
Cagra.1981s0006
I
0.690
Carubv10001366m.g
Capsella rubella
Carubv10001366m.g
I
0.690
Gorai.010G149300
Gossypium raimondii
Gorai.010G149300
I
0.690
SapurV1A.0024s0060
Salix purpurea
SapurV1A.0024s0060
I
0.689
Bostr.2983s0050
Boechera stricta
Bostr.2983s0050
I
0.688
Lus10039743.g
Linum usitatissimum
Lus10039743.g
I
0.687
GRMZM2G031323
Zea mays
GRMZM2G031323
I
0.684
GRMZM2G166337
Zea mays
GRMZM2G166337
I
0.684
LPERR07G15930
Leersia perrieri
LPERR07G15930
I
0.684
OB07G24240
Oryza brachyantha
OB07G24240
I
0.684
OBART07G18450
Oryza barthii
OBART07G18450
I
0.684
OGLUM07G18250
Oryza glumaepatula
OGLUM07G18250
I
0.684
OMERI07G15370
Oryza meridionalis
OMERI07G15370
I
0.684
ONIVA06G20400
Oryza nivara
ONIVA06G20400
I
0.684
OPUNC07G17410
Oryza punctata
OPUNC07G17410
I
0.684
ORGLA07G0148800
Oryza glaberrima
ORGLA07G0148800
I
0.684
ORUFI07G19200
Oryza rufipogon
ORUFI07G19200
I
0.684
POPTR_0004s03310
Populus trichocarpa
POPTR_0004s03310
I
0.684
Si030273m.g
Setaria italica
Si030273m.g
I
0.684
Eucgr.E03689
Eucalyptus grandis
Eucgr.E03689
I
0.684
Eucgr.E03819
Eucalyptus grandis
Eucgr.E03819
I
0.684
gene30725-v1.0-hybrid
Fragaria vesca
gene30725-v1.0-hybrid
I
0.684
Pavir.Ba00668
Panicum virgatum
Pavir.Ba00668
I
0.684
Thhalv10029512m.g
Eutrema salsugineum
Thhalv10029512m.g
I
0.684
AtMYB74
Arabidopsis lyrata
Al_scaffold_0006_3584
I
0.681
AtMYB74
Arabidopsis thaliana
AT4G05100
D
0.681
Bo9g076410
Brassica oleracea
Bo9g076410
I
0.681
Bra029553
Brassica rapa
Bra029553
I
0.681
OS07G0558100
Oryza sativa
OS07G0558100
I
0.681
PGSC0003DMG400022399
Solanum tuberosum
PGSC0003DMG400022399
I
0.681
POPTR_0011s04120
Populus trichocarpa
POPTR_0011s04120
I
0.681
PRUPE_ppa007438mg
Prunus persica
PRUPE_ppa007438mg
I
0.681
Sb02g036250
Sorghum bicolor
Sb02g036250
I
0.681
Solyc02g079280.2
Solanum lycopersicum
Solyc02g079280.2
I
0.681
TCM_030009
Theobroma cacao
TCM_030009
I
0.681
VIT_00s0203g00070
Vitis vinifera
VIT_00s0203g00070
I
0.681
Cla001360
Citrullus lanatus
Cla001360
I
0.681
Pm009892
Prunus mume
Pm009892
I
0.681
cassava19500.valid.m1
Manihot esculenta
cassava19500.valid.m1
I
0.681
Cucsa.045790
Cucumis sativus
Cucsa.045790
I
0.681
mgf018114m
Mimulus guttatus
mgf018114m
I
0.681
Ciclev10015729m.g
Citrus clementina
Ciclev10015729m.g
I
0.681
Gorai.009G174500
Gossypium raimondii
Gorai.009G174500
I
0.681
MDP0000492221
Malus domestica
MDP0000492221
I
0.681
orange1.1g018154m.g
Citrus sinensis
orange1.1g018154m.g
I
0.681
Pavir.J38204
Panicum virgatum
Pavir.J38204
I
0.681
SapurV1A.1088s0050
Salix purpurea
SapurV1A.1088s0050
I
0.681
SapurV1A.3561s0010
Salix purpurea
SapurV1A.3561s0010
I
0.681
GRMZM2G024468
Zea mays
GRMZM2G024468
I
0.680
Lus10014784.g
Linum usitatissimum
Lus10014784.g
I
0.680
Lus10030378.g
Linum usitatissimum
Lus10030378.g
I
0.680
Eucgr.D00751
Eucalyptus grandis
Eucgr.D00751
I
0.678
SapurV1A.0417s0210
Salix purpurea
SapurV1A.0417s0210
I
0.678
GSMUA_Achr1G23990_001
Musa acuminata
GSMUA_Achr1G23990_001
I
0.677
AtMYB41
Arabidopsis thaliana
AT4G28110
D
0.676
Bo3g022210
Brassica oleracea
Bo3g022210
I
0.676
Bo7g111870
Brassica oleracea
Bo7g111870
I
0.676
Bra024224
Brassica rapa
Bra024224
I
0.676
Bra029033
Brassica rapa
Bra029033
I
0.676
GLYMA07G30860
Glycine max
GLYMA07G30860
I
0.676
GLYMA08G06440
Glycine max
GLYMA08G06440
I
0.676
Bostr.7867s0646
Boechera stricta
Bostr.7867s0646
I
0.676
Cagra.1225s0085
Capsella grandiflora
Cagra.1225s0085
I
0.676
Carubv10007810m.g
Capsella rubella
Carubv10007810m.g
I
0.676
evm.TU.supercontig_27.135
Carica papaya
evm.TU.supercontig_27.135
I
0.676
SapurV1A.0028s0230
Salix purpurea
SapurV1A.0028s0230
I
0.676
GSMUA_Achr9G14850_001
Musa acuminata
GSMUA_Achr9G14850_001
I
0.675
Sb10g023665
Sorghum bicolor
Sb10g023665
I
0.675
Si007070m.g
Setaria italica
Si007070m.g
I
0.675
Pavir.Da00534
Panicum virgatum
Pavir.Da00534
I
0.675
POPTR_0019s14070
Populus trichocarpa
POPTR_0019s14070
I
0.674
mgf023669m
Mimulus guttatus
mgf023669m
I
0.674
mgf025298m
Mimulus guttatus
mgf025298m
I
0.674
mgf026502m
Mimulus guttatus
mgf026502m
I
0.674
PGSC0003DMG400017223
Solanum tuberosum
PGSC0003DMG400017223
I
0.673
AtMYB17
Populus trichocarpa
POPTR_0014s07700
I
0.673
Solyc09g090130.2
Solanum lycopersicum
Solyc09g090130.2
I
0.673
BRADI3G38807
Brachypodium distachyon
BRADI3G38807
I
0.672
AtMYB41
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_7001108
I
0.672
Lus10006740.g
Linum usitatissimum
Lus10006740.g
I
0.672
Lus10020085.g
Linum usitatissimum
Lus10020085.g
I
0.672
F775_14942
Aegilops tauschii
F775_14942
I
0.669
Traes_4AL_9BF07972C
Triticum aestivum
Traes_4AL_9BF07972C
I
0.669
Traes_4DL_4EE7DFCCD
Triticum aestivum
Traes_4DL_4EE7DFCCD
I
0.669
TRIUR3_17294
Triticum urartu
TRIUR3_17294
I
0.669
Cla014359
Citrullus lanatus
Cla014359
I
0.669
SapurV1A.0533s0230
Salix purpurea
SapurV1A.0533s0230
I
0.669
AtMYB93
Vitis vinifera
VIT_18s0001g05670
I
0.668
Eucgr.D02271
Eucalyptus grandis
Eucgr.D02271
I
0.668
Lus10041145.g
Linum usitatissimum
Lus10041145.g
I
0.668
OBART06G20450
Oryza barthii
OBART06G20450
I
0.667
OGLUM06G21530
Oryza glumaepatula
OGLUM06G21530
I
0.667
OLONG_019401
Oryza longistaminata
OLONG_019401
I
0.667
OMERI06G21070
Oryza meridionalis
OMERI06G21070
I
0.667
ONIVA06G24230
Oryza nivara
ONIVA06G24230
I
0.667
OPUNC06G18670
Oryza punctata
OPUNC06G18670
I
0.667
ORGLA06G0168900
Oryza glaberrima
ORGLA06G0168900
I
0.667
ORUFI06G21880
Oryza rufipogon
ORUFI06G21880
I
0.667
SELMODRAFT_38058
Selaginella moellendorffii
SELMODRAFT_38058
I
0.667
Cagra.1671s0249
Capsella grandiflora
Cagra.1671s0249
I
0.667
BRADI1G24887
Brachypodium distachyon
BRADI1G24887
I
0.666
GSMUA_AchrUn_randomG07900_001
Musa acuminata
GSMUA_AchrUn_randomG07900_001
I
0.666
MLOC_62436
Hordeum vulgare
MLOC_62436
I
0.666
Aquca_034_00364
Aquilegia coerulea
Aquca_034_00364
I
0.666
gene01992-v1.0-hybrid
Fragaria vesca
gene01992-v1.0-hybrid
I
0.666
MDP0000145050
Malus domestica
MDP0000145050
I
0.666
AtMYB17
Arabidopsis thaliana
AT3G61250
D
0.664
AtMYB17
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5002102
I
0.664
GSMUA_Achr11G00410_001
Musa acuminata
GSMUA_Achr11G00410_001
I
0.664
TCM_005371
Theobroma cacao
TCM_005371
I
0.664
30174.m009001
Ricinus communis
30174.m009001
I
0.664
cassava25066.valid.m1
Manihot esculenta
cassava25066.valid.m1
I
0.664
Ciclev10021268m.g
Citrus clementina
Ciclev10021268m.g
I
0.664
orange1.1g021486m.g
Citrus sinensis
orange1.1g021486m.g
I
0.664
PGSC0003DMG400011250
Solanum tuberosum
PGSC0003DMG400011250
I
0.663
LPERR06G17110
Leersia perrieri
LPERR06G17110
N
0.661
Cla021563
Citrullus lanatus
Cla021563
I
0.661
Cucsa.258270
Cucumis sativus
Cucsa.258270
I
0.661