Traes_2BL_EED456A17 (Triticum aestivum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Traes_2BL_EED456A17 T280913_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NIGT1
M02328_2.00
Oryza sativa
NNKATHCNNN

NNNGDATMNN
PBM
Weirauch et al.(2014)
pTH8646
0.839 0.872
HHO3
M02289_2.00
Arabidopsis thaliana
NWGATWCBNN

NNVGWATCWN
PBM
Weirauch et al.(2014)
pTH7278
0.831 0.872
HHO3
M07016_2.00
Arabidopsis thaliana
NNDHNNAAKATTCY

RGAATMTTNNDHNN
Dap-seq
OMalley et al.(2016)
At1g25550_colamp_a
0.831 0.872
HHO3
M07017_2.00
Arabidopsis thaliana
HNNAAKATTCY

RGAATMTTNND
Dap-seq
OMalley et al.(2016)
At1g25550_col
0.831 0.872
HHO2
M02290_2.00
Arabidopsis thaliana
NNKATHCNNN

NNNGDATMNN
PBM
Weirauch et al.(2014)
pTH7115
0.813 0.851
HHO2
M07029_2.00
Arabidopsis thaliana
AKATTCY

RGAATMT
Dap-seq
OMalley et al.(2016)
At1g68670_colamp_a
0.813 0.851
HHO2
M07030_2.00
Arabidopsis thaliana
RDATYNNAGATTC

GAATCTNNRATHY
Dap-seq
OMalley et al.(2016)
At1g68670_col
0.813 0.851
HHO6
M07024_2.00
Arabidopsis thaliana
GAATCTNNDAT

ATHNNAGATTC
Dap-seq
OMalley et al.(2016)
AT1G49560_col_a
0.803 0.872
HHO6
M07025_2.00
Arabidopsis thaliana
DGAATCTHNGATHCN

NGDATCNDAGATTCH
Dap-seq
OMalley et al.(2016)
AT1G49560_colamp_a
0.803 0.872
PK19779.1
M02354_2.00
Cannabis sativa
NNKATNCNNN

NNNGNATMNN
PBM
Weirauch et al.(2014)
pTH9610
0.790 0.851
EFM
M07044_2.00
Arabidopsis thaliana
NNGAATATTCY

RGAATATTCNN
Dap-seq
OMalley et al.(2016)
At2g03500_col_a
0.785 0.872
EFM
M07045_2.00
Arabidopsis thaliana
RGAATCHWAGATTC

GAATCTWDGATTCY
Dap-seq
OMalley et al.(2016)
At2g03500_colamp_a
0.785 0.872
PK14402.1
M02352_2.00
Cannabis sativa
NDWGATTCSNN

NNSGAATCWHN
PBM
Weirauch et al.(2014)
pTH9491
0.750 0.872
HRS1
M02284_2.00
Arabidopsis thaliana
AGATTCYN

NRGAATCT
PBM
Weirauch et al.(2014)
pTH7118
0.742 0.830
HRS1
M01068_2.00
Arabidopsis thaliana
NAGATTCBNN

NNVGAATCTN
PBM
Sullivan et al.(2014)
pTH7648
0.742 0.830
HRS1
M07004_2.00
Arabidopsis thaliana
NDDWWVNAAKATTCY

RGAATMTTNBWWHHN
Dap-seq
OMalley et al.(2016)
At1g13300_col_a
0.742 0.830
HHO5
M07112_2.00
Arabidopsis thaliana
HNDAAGATTCH

DGAATCTTHND
Dap-seq
OMalley et al.(2016)
AT4G37180_col_a
0.727 0.872
HHO5
M07113_2.00
Arabidopsis thaliana
NNDAAGATTCY

RGAATCTTHNN
Dap-seq
OMalley et al.(2016)
AT4G37180_colamp_a
0.727 0.872
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_2BL_EED456A17.1 Myb 281 332

Links

Other Myb/SANT family TFs
Other Triticum aestivum TFs

362 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29929.m004704 Ricinus communis 29929.m004704 D
AMTR_s00005p00185670 Amborella trichopoda AMTR_s00005p00185670 I
AMTR_s00055p00209070 Amborella trichopoda AMTR_s00055p00209070 I
Aquca_011_00297 Aquilegia coerulea Aquca_011_00297 I
Aquca_123_00031 Aquilegia coerulea Aquca_123_00031 I
GT-1 Arabidopsis thaliana AT1G13450 D
GT-4 Arabidopsis thaliana AT3G25990 D
Bo2g138840 Brassica oleracea Bo2g138840 I
Bo5g017510 Brassica oleracea Bo5g017510 I
Bo8g107400 Brassica oleracea Bo8g107400 I
Bostr.0556s0275 Boechera stricta Bostr.0556s0275 I
Bostr.13671s0104 Boechera stricta Bostr.13671s0104 I
Bra019721 Brassica rapa Bra019721 I
Bra036354 Brassica rapa Bra036354 I
Cagra.3501s0157 Capsella grandiflora Cagra.3501s0157 I
Cagra.6197s0012 Capsella grandiflora Cagra.6197s0012 I
Carubv10009313m.g Capsella rubella Carubv10009313m.g I
Carubv10017413m.g Capsella rubella Carubv10017413m.g I
cassava11841.valid.m1 Manihot esculenta cassava11841.valid.m1 I
cassava13991.valid.m1 Manihot esculenta cassava13991.valid.m1 D
Ca_11315 Cicer arietinum Ca_11315 I
Ciclev10031750m.g Citrus clementina Ciclev10031750m.g I
Cla023054 Citrullus lanatus Cla023054 I
Cucsa.394820 Cucumis sativus Cucsa.394820 I
Eucgr.B03456 Eucalyptus grandis Eucgr.B03456 I
Eucgr.J02286 Eucalyptus grandis Eucgr.J02286 I
evm.TU.supercontig_130.35 Carica papaya evm.TU.supercontig_130.35 I
evm.TU.supercontig_1453.1 Carica papaya evm.TU.supercontig_1453.1 I
fgenesh2_kg.5__353__AT3G25990.1 Arabidopsis lyrata fgenesh2_kg.5__353__AT3G25990.1 D
GLYMA11G37390 Glycine max GLYMA11G37390 D
GLYMA18G01360 Glycine max GLYMA18G01360 I
Gorai.008G163200 Gossypium raimondii Gorai.008G163200 I
Gorai.009G333800 Gossypium raimondii Gorai.009G333800 I
GRMZM2G047370 Zea mays GRMZM2G047370 I
GSMUA_Achr3G19370_001 Musa acuminata GSMUA_Achr3G19370_001 I
GSMUA_Achr5G17240_001 Musa acuminata GSMUA_Achr5G17240_001 I
LjT04G17.70.nc Lotus japonicus LjT04G17.70.nc I
Lus10015824.g Linum usitatissimum Lus10015824.g I
Lus10036978.g Linum usitatissimum Lus10036978.g I
MDP0000164819 Malus domestica MDP0000164819 D
MDP0000275412 Malus domestica MDP0000275412 I
mgf016368m Mimulus guttatus mgf016368m I
MLOC_64014 Hordeum vulgare MLOC_64014 I
MTR_3g085960 Medicago truncatula MTR_3g085960 D
OB04G23970 Oryza brachyantha OB04G23970 I
orange1.1g015940m.g Citrus sinensis orange1.1g015940m.g I
OS04G0486400 Oryza sativa OS04G0486400 D
Pavir.Ga01561 Panicum virgatum Pavir.Ga01561 I
PDK_20s1345831g002 Phoenix dactylifera PDK_20s1345831g002 I
PK20543.1 Cannabis sativa PK20543.1 D
Pm006885 Prunus mume Pm006885 I
Pm016214 Prunus mume Pm016214 I
POPTR_0008s17980 Populus trichocarpa POPTR_0008s17980 I
POPTR_0010s06510 Populus trichocarpa POPTR_0010s06510 I
PRUPE_ppa005942mg Prunus persica PRUPE_ppa005942mg I
PRUPE_ppa009404mg Prunus persica PRUPE_ppa009404mg I
SapurV1A.0206s0170 Salix purpurea SapurV1A.0206s0170 I
SapurV1A.1719s0020 Salix purpurea SapurV1A.1719s0020 I
GT-1 Arabidopsis lyrata scaffold_101505.1 D
Si010147m.g Setaria italica Si010147m.g I
Si036121m.g Setaria italica Si036121m.g I
Solyc12g077540.1 Solanum lycopersicum Solyc12g077540.1 I
TCM_010751 Theobroma cacao TCM_010751 I
Thhalv10004359m.g Eutrema salsugineum Thhalv10004359m.g I
Thhalv10007959m.g Eutrema salsugineum Thhalv10007959m.g I
VIT_01s0010g02420 Vitis vinifera VIT_01s0010g02420 I
VIT_14s0171g00450 Vitis vinifera VIT_14s0171g00450 I
VIT_17s0000g10420 Vitis vinifera VIT_17s0000g10420 D