CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_2DL_25FD0FFB4
(
Triticum aestivum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Traes_2DL_25FD0FFB4
T280928_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB107
M07061_2.00
Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN
Dap-seq
OMalley et al.(2016)
MYB107_col_a
0.664
0.763
MYB107
M07062_2.00
Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW
Dap-seq
OMalley et al.(2016)
MYB107_colamp_a
0.664
0.763
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_2DL_25FD0FFB4.1
Myb
15
64
KGPWTEEEDKTLVEYIQKRGGNVGSWRGLPKATGLNRCGKSCRLRWTNYL
Traes_2DL_25FD0FFB4.1
Myb
70
115
RGNFTDDEERLIINLHASLGNKWSTIATHLEGRTDNEIKNYWNTHI
Links
Other
Myb/SANT
family TFs
Other
Triticum aestivum
TFs
116 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Traes_2DL_6BD0572DF
Triticum aestivum
Traes_2DL_6BD0572DF
I
0.909
LPERR04G19330
Leersia perrieri
LPERR04G19330
I
0.848
Traes_2AL_B01AE830F
Triticum aestivum
Traes_2AL_B01AE830F
I
0.846
Traes_2BL_560CCE975
Triticum aestivum
Traes_2BL_560CCE975
I
0.836
Traes_2AL_5EE86C5BC
Triticum aestivum
Traes_2AL_5EE86C5BC
I
0.831
Traes_2DL_54D11D5E7
Triticum aestivum
Traes_2DL_54D11D5E7
I
0.830
Traes_2AL_E5B3B79F7
Triticum aestivum
Traes_2AL_E5B3B79F7
I
0.828
F775_02773
Aegilops tauschii
F775_02773
I
0.822
Traes_2AL_FBC0ED0EE
Triticum aestivum
Traes_2AL_FBC0ED0EE
N
0.813
Traes_2BL_C843D1851
Triticum aestivum
Traes_2BL_C843D1851
N
0.805
TRIUR3_26633
Triticum urartu
TRIUR3_26633
I
0.804
Traes_2BL_88BBF0441
Triticum aestivum
Traes_2BL_88BBF0441
N
0.802
BGIOSGA014443
Oryza indica
BGIOSGA014443
I
0.788
OBART04G23600
Oryza barthii
OBART04G23600
I
0.788
OGLUM04G23540
Oryza glumaepatula
OGLUM04G23540
I
0.788
OPUNC04G21140
Oryza punctata
OPUNC04G21140
I
0.788
ORGLA04G0201500
Oryza glaberrima
ORGLA04G0201500
I
0.788
ORUFI04G25320
Oryza rufipogon
ORUFI04G25320
I
0.788
OS04G0593200
Oryza sativa
OS04G0593200
I
0.788
OB04G30520
Oryza brachyantha
OB04G30520
I
0.785
ONIVA04G19830
Oryza nivara
ONIVA04G19830
I
0.771
Traes_2AL_1D7D3D0DE
Triticum aestivum
Traes_2AL_1D7D3D0DE
N
0.766
Si012660m.g
Setaria italica
Si012660m.g
N
0.762
GRMZM2G081557
Zea mays
GRMZM2G081557
N
0.754
Pavir.Ga00758
Panicum virgatum
Pavir.Ga00758
I
0.745
Pavir.Gb00812
Panicum virgatum
Pavir.Gb00812
I
0.745
chr1.CM0591.530.nd
Lotus japonicus
chr1.CM0591.530.nd
I
0.730
PK05754.1
Cannabis sativa
PK05754.1
I
0.725
Cucsa.318610
Cucumis sativus
Cucsa.318610
I
0.723
Pavir.Da02398
Panicum virgatum
Pavir.Da02398
I
0.723
BGIOSGA022168
Oryza indica
BGIOSGA022168
I
0.717
BGIOSGA022169
Oryza indica
BGIOSGA022169
I
0.717
BGIOSGA022174
Oryza indica
BGIOSGA022174
I
0.717
OBART06G00820
Oryza barthii
OBART06G00820
I
0.717
OGLUM06G00580
Oryza glumaepatula
OGLUM06G00580
I
0.717
OMERI06G00710
Oryza meridionalis
OMERI06G00710
I
0.717
ONIVA06G00830
Oryza nivara
ONIVA06G00830
I
0.717
OPUNC06G00590
Oryza punctata
OPUNC06G00590
I
0.717
ORUFI06G00810
Oryza rufipogon
ORUFI06G00810
I
0.717
OS06G0112700
Oryza sativa
OS06G0112700
I
0.717
Cla013211
Citrullus lanatus
Cla013211
I
0.706
Gorai.003G183700
Gossypium raimondii
Gorai.003G183700
I
0.701
Ca_11832
Cicer arietinum
Ca_11832
I
0.699
MTR_7g076740
Medicago truncatula
MTR_7g076740
I
0.698
GLYMA03G01540
Glycine max
GLYMA03G01540
I
0.694
30054.m000809
Ricinus communis
30054.m000809
I
0.694
Ca_06226
Cicer arietinum
Ca_06226
I
0.692
evm.TU.supercontig_90.68
Carica papaya
evm.TU.supercontig_90.68
I
0.692
GLYMA09G39721
Glycine max
GLYMA09G39721
I
0.690
GLYMA18G46480
Glycine max
GLYMA18G46480
I
0.690
OB06G10740
Oryza brachyantha
OB06G10740
I
0.687
GSMUA_Achr4G19030_001
Musa acuminata
GSMUA_Achr4G19030_001
I
0.686
gene19065-v1.0-hybrid
Fragaria vesca
gene19065-v1.0-hybrid
I
0.686
GLYMA07G07960
Glycine max
GLYMA07G07960
I
0.685
GLYMA12G01960
Glycine max
GLYMA12G01960
I
0.685
chr3.CM0127.290.nc
Lotus japonicus
chr3.CM0127.290.nc
I
0.685
PRUPE_ppa007268mg
Prunus persica
PRUPE_ppa007268mg
I
0.684
TCM_016551
Theobroma cacao
TCM_016551
I
0.684
Pm018056
Prunus mume
Pm018056
I
0.684
GLYMA01G02070
Glycine max
GLYMA01G02070
I
0.680
GLYMA01G44370
Glycine max
GLYMA01G44370
I
0.679
GLYMA11G01150
Glycine max
GLYMA11G01150
I
0.679
BRADI1G51747
Brachypodium distachyon
BRADI1G51747
I
0.678
F775_14942
Aegilops tauschii
F775_14942
I
0.678
GRMZM2G044824
Zea mays
GRMZM2G044824
I
0.678
Si006790m.g
Setaria italica
Si006790m.g
I
0.678
Traes_4DL_4EE7DFCCD
Triticum aestivum
Traes_4DL_4EE7DFCCD
I
0.678
Pavir.J23197
Panicum virgatum
Pavir.J23197
I
0.678
MTR_5g007370
Medicago truncatula
MTR_5g007370
I
0.676
cassava25066.valid.m1
Manihot esculenta
cassava25066.valid.m1
I
0.676
GRMZM2G102790
Zea mays
GRMZM2G102790
I
0.675
MTR_8g031360
Medicago truncatula
MTR_8g031360
I
0.675
Traes_7DS_91CCCF6DB1
Triticum aestivum
Traes_7DS_91CCCF6DB1
I
0.675
Traes_7DS_91CCCF6DB
Triticum aestivum
Traes_7DS_91CCCF6DB
I
0.675
TRIUR3_17294
Triticum urartu
TRIUR3_17294
I
0.675
Ca_13779
Cicer arietinum
Ca_13779
I
0.675
Gorai.007G348600
Gossypium raimondii
Gorai.007G348600
I
0.675
GLYMA11G11570
Glycine max
GLYMA11G11570
I
0.674
Ciclev10020765m.g
Citrus clementina
Ciclev10020765m.g
I
0.674
orange1.1g039198m.g
Citrus sinensis
orange1.1g039198m.g
I
0.674
F775_04867
Aegilops tauschii
F775_04867
I
0.672
OBART06G07710
Oryza barthii
OBART06G07710
I
0.666
OGLUM06G08200
Oryza glumaepatula
OGLUM06G08200
I
0.666
OMERI06G09300
Oryza meridionalis
OMERI06G09300
I
0.666
ONIVA06G08940
Oryza nivara
ONIVA06G08940
I
0.666
OPUNC06G07380
Oryza punctata
OPUNC06G07380
I
0.666
ORGLA06G0073000
Oryza glaberrima
ORGLA06G0073000
I
0.666
ORUFI06G07920
Oryza rufipogon
ORUFI06G07920
I
0.666
OS06G0221000
Oryza sativa
OS06G0221000
I
0.666
TCM_025488
Theobroma cacao
TCM_025488
I
0.665
gene12564-v1.0-hybrid
Fragaria vesca
gene12564-v1.0-hybrid
I
0.665
Gorai.003G054100
Gossypium raimondii
Gorai.003G054100
I
0.665
MYB107
Arabidopsis thaliana
AT3G02940
D
0.664
Bo1g155040
Brassica oleracea
Bo1g155040
I
0.664
Bra021382
Brassica rapa
Bra021382
I
0.664
Bra032028
Brassica rapa
Bra032028
I
0.664
MYB107
Arabidopsis lyrata
fgenesh2_kg.3__241__AT3G02940.1
I
0.664
GSMUA_Achr11G07850_001
Musa acuminata
GSMUA_Achr11G07850_001
I
0.664
Cla021563
Citrullus lanatus
Cla021563
I
0.664
Cucsa.258270
Cucumis sativus
Cucsa.258270
I
0.664
Bostr.19046s0006
Boechera stricta
Bostr.19046s0006
I
0.664
Cagra.1194s0007
Capsella grandiflora
Cagra.1194s0007
I
0.664
Carubv10016434m.g
Capsella rubella
Carubv10016434m.g
I
0.664
Thhalv10022405m.g
Eutrema salsugineum
Thhalv10022405m.g
I
0.664
Lus10036472.g
Linum usitatissimum
Lus10036472.g
I
0.663
Lus10041142.g
Linum usitatissimum
Lus10041142.g
I
0.663
GSMUA_Achr10G24560_001
Musa acuminata
GSMUA_Achr10G24560_001
I
0.662
GSMUA_AchrUn_randomG02890_001
Musa acuminata
GSMUA_AchrUn_randomG02890_001
I
0.662
LPERR06G00600
Leersia perrieri
LPERR06G00600
I
0.662
AMTR_s00038p00183620
Amborella trichopoda
AMTR_s00038p00183620
I
0.661
PGSC0003DMG400006408
Solanum tuberosum
PGSC0003DMG400006408
I
0.661
Solyc04g074170.1
Solanum lycopersicum
Solyc04g074170.1
I
0.661
Traes_4AL_9BF07972C
Triticum aestivum
Traes_4AL_9BF07972C
I
0.661
Aquca_005_00496
Aquilegia coerulea
Aquca_005_00496
I
0.661
Aquca_010_00195
Aquilegia coerulea
Aquca_010_00195
I
0.661
evm.TU.supercontig_36.134
Carica papaya
evm.TU.supercontig_36.134
I
0.661