CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_5DL_8ABCB84A7
(
Triticum aestivum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Traes_5DL_8ABCB84A7
T281195_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB4
M02303_2.00
Arabidopsis thaliana
YACCWACY
RGTWGGTR
PBM
Weirauch et al.(2014)
pTH7075
0.818
0.925
MYB4
M07115_2.00
Arabidopsis thaliana
NYYACCWAMHWHNDD
HHNDWDKTWGGTRRN
Dap-seq
OMalley et al.(2016)
MYB4_col200_a
0.818
0.925
MYB3
M02288_2.00
Arabidopsis thaliana
NNYACCTACCN
NGGTAGGTRNN
PBM
Weirauch et al.(2014)
pTH7125
0.752
0.860
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_5DL_8ABCB84A7.1
Myb
14
61
KGAWTKEEDQRLIAHIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL
Traes_5DL_8ABCB84A7.1
Myb
67
112
RGNFTDEEDELIIKLHEFLGNKWSLIAGRLPGRTDNEIKNYWNTHV
Links
Other
Myb/SANT
family TFs
Other
Triticum aestivum
TFs
391 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CLEC004359
Cimex lectularius
CLEC004359
N
GB41714
Apis mellifera
GB41714
N
Hsal_10061--XP_001120631.1_APIME
Harpegnathos saltator
Hsal_10061--XP_001120631.1_APIME
N
L798_08469
Zootermopsis nevadensis
L798_08469
N
LLOJ003575
Lutzomyia longipalpis
LLOJ003575
N
NV21721
Nasonia vitripennis
NV21721
N
SINV11211
Solenopsis invicta
SINV11211
N