CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Traes_6AS_5562B97F7
(
Triticum aestivum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Traes_6AS_5562B97F7
T281235_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Gam1
M02703_2.00
Hordeum vulgare
NVYAACSGMC
GKCSGTTRBN
SELEX
Mathelier et al.(2014)
MA0034.1
0.661
0.742
Gam1
M11061_2.00
Hordeum vulgare
YAACSRHM
KDYSGTTR
Transfac
Matys et al.(2006)
P$GAMYB_01
0.661
0.742
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_6AS_5562B97F7.1
Myb
30
77
KGPWTPDEDQLLVEHVRRHGEGSWNAVRRETGLLRCGKSCRLRWANHL
Traes_6AS_5562B97F7.1
Myb
83
128
RGPFSPEEERLILRLHALIGNKWARISAHLPGRTDNEIKNYWNTRL
Links
Other
Myb/SANT
family TFs
Other
Triticum aestivum
TFs
117 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_14392
Aegilops tauschii
F775_14392
I
0.909
Traes_6DS_A0EC5D808
Triticum aestivum
Traes_6DS_A0EC5D808
I
0.909
TRIUR3_22706
Triticum urartu
TRIUR3_22706
I
0.909
Si006555m.g
Setaria italica
Si006555m.g
I
0.790
Pavir.Db00593
Panicum virgatum
Pavir.Db00593
I
0.790
Sb10g027280
Sorghum bicolor
Sb10g027280
I
0.787
BGIOSGA020673
Oryza indica
BGIOSGA020673
I
0.786
OGLUM06G26120
Oryza glumaepatula
OGLUM06G26120
I
0.786
OMERI06G24960
Oryza meridionalis
OMERI06G24960
I
0.786
ONIVA06G28020
Oryza nivara
ONIVA06G28020
I
0.786
OPUNC06G22490
Oryza punctata
OPUNC06G22490
I
0.786
ORUFI06G26670
Oryza rufipogon
ORUFI06G26670
I
0.786
OS06G0679400
Oryza sativa
OS06G0679400
I
0.786
Pavir.Da00077
Panicum virgatum
Pavir.Da00077
I
0.779
F775_00954
Aegilops tauschii
F775_00954
I
0.775
Traes_7AL_0AD4A7A87
Triticum aestivum
Traes_7AL_0AD4A7A87
I
0.775
Traes_7DL_FAF2AE9FB
Triticum aestivum
Traes_7DL_FAF2AE9FB
I
0.775
TRIUR3_17146
Triticum urartu
TRIUR3_17146
I
0.775
BRADI1G32720
Brachypodium distachyon
BRADI1G32720
I
0.772
LPERR06G20610
Leersia perrieri
LPERR06G20610
I
0.751
GRMZM2G161512
Zea mays
GRMZM2G161512
N
0.737
GSMUA_Achr4G23690_001
Musa acuminata
GSMUA_Achr4G23690_001
I
0.724
VIT_08s0007g07230
Vitis vinifera
VIT_08s0007g07230
I
0.707
Si039629m.g
Setaria italica
Si039629m.g
I
0.702
Pavir.Ib03827
Panicum virgatum
Pavir.Ib03827
I
0.702
TCM_024180
Theobroma cacao
TCM_024180
I
0.696
TCM_025910
Theobroma cacao
TCM_025910
I
0.696
Eucgr.B03606
Eucalyptus grandis
Eucgr.B03606
I
0.696
MLOC_6041
Hordeum vulgare
MLOC_6041
I
0.692
Ca_17627
Cicer arietinum
Ca_17627
I
0.690
F775_23034
Aegilops tauschii
F775_23034
I
0.688
GSMUA_Achr7G13700_001
Musa acuminata
GSMUA_Achr7G13700_001
I
0.688
TRIUR3_20797
Triticum urartu
TRIUR3_20797
I
0.688
MDP0000147309
Malus domestica
MDP0000147309
I
0.686
orange1.1g036215m.g
Citrus sinensis
orange1.1g036215m.g
I
0.686
Ca_11832
Cicer arietinum
Ca_11832
I
0.685
Si004316m.g
Setaria italica
Si004316m.g
I
0.683
Pavir.J31180
Panicum virgatum
Pavir.J31180
I
0.683
GSMUA_Achr10G14030_001
Musa acuminata
GSMUA_Achr10G14030_001
I
0.682
SapurV1A.0553s0100
Salix purpurea
SapurV1A.0553s0100
I
0.682
SapurV1A.0553s0110
Salix purpurea
SapurV1A.0553s0110
I
0.682
GSMUA_Achr5G06530_001
Musa acuminata
GSMUA_Achr5G06530_001
I
0.681
GSMUA_Achr7G00280_001
Musa acuminata
GSMUA_Achr7G00280_001
I
0.680
GRMZM2G343068
Zea mays
GRMZM2G343068
N
0.679
AMTR_s00024p00250970
Amborella trichopoda
AMTR_s00024p00250970
I
0.677
POPTR_0019s05210
Populus trichocarpa
POPTR_0019s05210
I
0.677
MYB101
Vitis vinifera
VIT_12s0059g00700
I
0.677
Eucgr.A02110
Eucalyptus grandis
Eucgr.A02110
I
0.677
AMTR_s00068p00092800
Amborella trichopoda
AMTR_s00068p00092800
I
0.673
AMTR_s00068p00097220
Amborella trichopoda
AMTR_s00068p00097220
I
0.673
SELMODRAFT_127220
Selaginella moellendorffii
SELMODRAFT_127220
I
0.672
SELMODRAFT_98669
Selaginella moellendorffii
SELMODRAFT_98669
I
0.672
Solyc01g005660.1
Solanum lycopersicum
Solyc01g005660.1
I
0.672
Gorai.007G260600
Gossypium raimondii
Gorai.007G260600
I
0.672
Eucgr.D02390
Eucalyptus grandis
Eucgr.D02390
I
0.671
Gorai.008G126700
Gossypium raimondii
Gorai.008G126700
I
0.671
SapurV1A.0598s0010
Salix purpurea
SapurV1A.0598s0010
I
0.671
F775_14942
Aegilops tauschii
F775_14942
I
0.670
GRMZM2G044824
Zea mays
GRMZM2G044824
I
0.670
GRMZM2G102790
Zea mays
GRMZM2G102790
I
0.670
GSMUA_Achr6G14840_001
Musa acuminata
GSMUA_Achr6G14840_001
I
0.670
Traes_4AL_9BF07972C
Triticum aestivum
Traes_4AL_9BF07972C
I
0.670
Traes_4DL_4EE7DFCCD
Triticum aestivum
Traes_4DL_4EE7DFCCD
I
0.670
TRIUR3_17294
Triticum urartu
TRIUR3_17294
I
0.670
Ciclev10013466m.g
Citrus clementina
Ciclev10013466m.g
I
0.670
evm.TU.supercontig_12.292
Carica papaya
evm.TU.supercontig_12.292
I
0.670
orange1.1g047854m.g
Citrus sinensis
orange1.1g047854m.g
I
0.670
AC217264.3_FG005
Zea mays
AC217264.3_FG005
I
0.669
GRMZM2G070523
Zea mays
GRMZM2G070523
I
0.669
Sb01g015920
Sorghum bicolor
Sb01g015920
I
0.669
cassava6348.valid.m1
Manihot esculenta
cassava6348.valid.m1
I
0.669
mgf010934m
Mimulus guttatus
mgf010934m
I
0.669
mgf019173m
Mimulus guttatus
mgf019173m
I
0.669
OB03G32840
Oryza brachyantha
OB03G32840
I
0.668
OBART03G24120
Oryza barthii
OBART03G24120
I
0.668
OGLUM03G24880
Oryza glumaepatula
OGLUM03G24880
I
0.668
OLONG_025057
Oryza longistaminata
OLONG_025057
I
0.668
OMERI03G21920
Oryza meridionalis
OMERI03G21920
I
0.668
ONIVA04G15310
Oryza nivara
ONIVA04G15310
I
0.668
OPUNC03G22220
Oryza punctata
OPUNC03G22220
I
0.668
ORGLA03G0224700
Oryza glaberrima
ORGLA03G0224700
I
0.668
ORUFI03G24730
Oryza rufipogon
ORUFI03G24730
I
0.668
OS03G0578900
Oryza sativa
OS03G0578900
I
0.668
PRUPE_ppa009439mg
Prunus persica
PRUPE_ppa009439mg
I
0.668
Pm018338
Prunus mume
Pm018338
I
0.668
Ciclev10021571m.g
Citrus clementina
Ciclev10021571m.g
I
0.668
gene18691-v1.0-hybrid
Fragaria vesca
gene18691-v1.0-hybrid
I
0.668
MDP0000915330
Malus domestica
MDP0000915330
I
0.668
orange1.1g040841m.g
Citrus sinensis
orange1.1g040841m.g
I
0.668
PK14784.1
Cannabis sativa
PK14784.1
I
0.668
Bo8g104300
Brassica oleracea
Bo8g104300
I
0.666
POPTR_0003s21120
Populus trichocarpa
POPTR_0003s21120
I
0.666
POPTR_0013s05300
Populus trichocarpa
POPTR_0013s05300
I
0.666
PRUPE_ppa006730mg
Prunus persica
PRUPE_ppa006730mg
I
0.666
cassava9274.m1
Manihot esculenta
cassava9274.m1
I
0.666
Ciclev10015648m.g
Citrus clementina
Ciclev10015648m.g
I
0.666
evm.TU.supercontig_119.55
Carica papaya
evm.TU.supercontig_119.55
I
0.666
Gorai.007G350500
Gossypium raimondii
Gorai.007G350500
I
0.666
MDP0000655330
Malus domestica
MDP0000655330
I
0.666
MDP0000723614
Malus domestica
MDP0000723614
I
0.666
MDP0000791870
Malus domestica
MDP0000791870
I
0.666
orange1.1g040726m.g
Citrus sinensis
orange1.1g040726m.g
I
0.666
SapurV1A.0081s0400
Salix purpurea
SapurV1A.0081s0400
I
0.666
SapurV1A.1276s0050
Salix purpurea
SapurV1A.1276s0050
I
0.666
Cagra.3373s0030
Capsella grandiflora
Cagra.3373s0030
I
0.664
Carubv10018382m.g
Capsella rubella
Carubv10018382m.g
I
0.664
AMTR_s00068p00099460
Amborella trichopoda
AMTR_s00068p00099460
I
0.663
mgf001865m
Mimulus guttatus
mgf001865m
I
0.662
Gorai.004G150800
Gossypium raimondii
Gorai.004G150800
I
0.662
BRADI2G53010
Brachypodium distachyon
BRADI2G53010
I
0.661
F775_28392
Aegilops tauschii
F775_28392
I
0.661
Gam1
Hordeum vulgare
Q96464_HORVU
D
0.661
TRAES3BF027700010CFD_g
Triticum aestivum
TRAES3BF027700010CFD_g
I
0.661
TRIUR3_27104
Triticum urartu
TRIUR3_27104
I
0.661
MDP0000574942
Malus domestica
MDP0000574942
I
0.661
Pavir.Ab00447
Panicum virgatum
Pavir.Ab00447
I
0.661
Pavir.Ea03206
Panicum virgatum
Pavir.Ea03206
I
0.661