VIT_06s0004g04940 (Vitis vinifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 VIT_06s0004g04940 T281942_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK21687.1
M01282_2.00
Cannabis sativa
HWAAACCYH

DRGGTTTWD
PBM
Lambert et al.(2019)
pTH11299
0.909 0.979
TRP2
M07092_2.00
Arabidopsis thaliana
AAACCCTAAACCCTAAACCC

GGGTTTAGGGTTTAGGGTTT
Dap-seq
OMalley et al.(2016)
TRP2_col_a
0.901 0.957
TRP2
M07093_2.00
Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT

AGGGTTTAGGGTTTAGGGTTT
Dap-seq
OMalley et al.(2016)
TRP2_colamp_a
0.901 0.957
TRP1
M07148_2.00
Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA

TTAGGGTTTAGGGTTTAGGGTTT
Dap-seq
OMalley et al.(2016)
TRP1_col
0.891 0.957
TRP5
M01266_2.00
Arabidopsis thaliana
NHWAAACCYH

DRGGTTTWDN
PBM
Lambert et al.(2019)
pTH9963
0.849 0.957
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_06s0004g04940.t01 Myb 597 647

Links

Other Myb/SANT family TFs
Other Vitis vinifera TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
estExt_fgenesh1_pg.C_chr_1.20297 Pichia stipitis estExt_fgenesh1_pg.C_chr_1.20297 I
KUCA_T00002785001 Kuraishia capsulata KUCA_T00002785001 I
NDAI_0C00690 Naumovozyma dairenensis NDAI_0C00690 I
PICST_66679 Scheffersomyces stipitis PICST_66679 I
SKUD_206715 Saccharomyces kudriavzevii SKUD_206715 I
SU7_1409 Saccharomyces arboricola SU7_1409 I
SU7_2774 Saccharomyces arboricola SU7_2774 I
TDEL_0A04530 Torulaspora delbrueckii TDEL_0A04530 I
TPHA_0K00210 Tetrapisispora phaffii TPHA_0K00210 I
Kpol_1023p63 Vanderwaltozyma polyspora Kpol_1023p63 I
23216_YHR006W Saccharomyces bayanus 23216_YHR006W I
5271_YDR463W Saccharomyces mikatae 5271_YDR463W I
5542_YDR463W Saccharomyces paradoxus 5542_YDR463W I
5582_YDR463W Saccharomyces bayanus 5582_YDR463W I
KLTH0G05104g Kluyveromyces thermotolerans KLTH0G05104g I
Kwal_18337 Kluyveromyces waltii Kwal_18337 I
SAKL0G06292g Lachancea kluyveri SAKL0G06292g I
GNLVRS01_PISO0M20868g Millerozyma farinosa GNLVRS01_PISO0M20868g I
AACERI_AaceriAFR531W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFR531W I
AGOS_AFR461C Ashbya gossypii AGOS_AFR461C I
AGOS_AFR531W Ashbya gossypii AGOS_AFR531W I
CAGL0E04312g Candida glabrata CAGL0E04312g I
CORT_0D02790 Candida orthopsilosis CORT_0D02790 I
DEHA2E16478g Debaryomyces hansenii DEHA2E16478g I
Ecym_1404 Eremothecium cymbalariae Ecym_1404 I
Ecym_1475 Eremothecium cymbalariae Ecym_1475 I
AACERI_AaceriAFR461C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFR461C I
GNLVRS01_PISO0N21111g Millerozyma farinosa GNLVRS01_PISO0N21111g I
KAFR_0A06720 Kazachstania africana KAFR_0A06720 I
KAFR_0C05710 Kazachstania africana KAFR_0C05710 I
KLLA0_F10109g Kluyveromyces lactis KLLA0_F10109g I
KLTH0G05104g Lachancea thermotolerans KLTH0G05104g I
KNAG_0B03350 Kazachstania naganishii KNAG_0B03350 I
KNAG_0C06030 Kazachstania naganishii KNAG_0C06030 I