CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_06s0004g04940
(
Vitis vinifera
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
VIT_06s0004g04940
T281942_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK21687.1
M01282_2.00
Cannabis sativa
HWAAACCYH
DRGGTTTWD
PBM
Lambert et al.(2019)
pTH11299
0.909
0.979
TRP2
M07092_2.00
Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT
Dap-seq
OMalley et al.(2016)
TRP2_col_a
0.901
0.957
TRP2
M07093_2.00
Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT
Dap-seq
OMalley et al.(2016)
TRP2_colamp_a
0.901
0.957
TRP1
M07148_2.00
Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT
Dap-seq
OMalley et al.(2016)
TRP1_col
0.891
0.957
TRP5
M01266_2.00
Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN
PBM
Lambert et al.(2019)
pTH9963
0.849
0.957
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_06s0004g04940.t01
Myb
597
647
RRPFSVSEVEALVQAVEKLGTGRWRDVKLRAFDNAKHRTYVDLKDKWKTLV
Links
Other
Myb/SANT
family TFs
Other
Vitis vinifera
TFs
197 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh1_pg.C_chr_1.20297
Pichia stipitis
estExt_fgenesh1_pg.C_chr_1.20297
I
KUCA_T00002785001
Kuraishia capsulata
KUCA_T00002785001
I
NDAI_0C00690
Naumovozyma dairenensis
NDAI_0C00690
I
PICST_66679
Scheffersomyces stipitis
PICST_66679
I
SKUD_206715
Saccharomyces kudriavzevii
SKUD_206715
I
SU7_1409
Saccharomyces arboricola
SU7_1409
I
SU7_2774
Saccharomyces arboricola
SU7_2774
I
TDEL_0A04530
Torulaspora delbrueckii
TDEL_0A04530
I
TPHA_0K00210
Tetrapisispora phaffii
TPHA_0K00210
I
Kpol_1023p63
Vanderwaltozyma polyspora
Kpol_1023p63
I
23216_YHR006W
Saccharomyces bayanus
23216_YHR006W
I
5271_YDR463W
Saccharomyces mikatae
5271_YDR463W
I
5542_YDR463W
Saccharomyces paradoxus
5542_YDR463W
I
5582_YDR463W
Saccharomyces bayanus
5582_YDR463W
I
KLTH0G05104g
Kluyveromyces thermotolerans
KLTH0G05104g
I
Kwal_18337
Kluyveromyces waltii
Kwal_18337
I
SAKL0G06292g
Lachancea kluyveri
SAKL0G06292g
I
GNLVRS01_PISO0M20868g
Millerozyma farinosa
GNLVRS01_PISO0M20868g
I
AACERI_AaceriAFR531W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAFR531W
I
AGOS_AFR461C
Ashbya gossypii
AGOS_AFR461C
I
AGOS_AFR531W
Ashbya gossypii
AGOS_AFR531W
I
CAGL0E04312g
Candida glabrata
CAGL0E04312g
I
CORT_0D02790
Candida orthopsilosis
CORT_0D02790
I
DEHA2E16478g
Debaryomyces hansenii
DEHA2E16478g
I
Ecym_1404
Eremothecium cymbalariae
Ecym_1404
I
Ecym_1475
Eremothecium cymbalariae
Ecym_1475
I
AACERI_AaceriAFR461C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAFR461C
I
GNLVRS01_PISO0N21111g
Millerozyma farinosa
GNLVRS01_PISO0N21111g
I
KAFR_0A06720
Kazachstania africana
KAFR_0A06720
I
KAFR_0C05710
Kazachstania africana
KAFR_0C05710
I
KLLA0_F10109g
Kluyveromyces lactis
KLLA0_F10109g
I
KLTH0G05104g
Lachancea thermotolerans
KLTH0G05104g
I
KNAG_0B03350
Kazachstania naganishii
KNAG_0B03350
I
KNAG_0C06030
Kazachstania naganishii
KNAG_0C06030
I