Ca_01912 (Cicer arietinum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ca_01912 T282917_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK17526.1
M02353_2.00 		Cannabis sativa
NNTTATCCAN
NTGGATAANN		 PBM
Weirauch et al.(2014)
pTH9588 		0.762 0.717
PK23829.1
M02355_2.00 		Cannabis sativa
VTTATCCD
HGGATAAB		 PBM
Weirauch et al.(2014)
pTH9592 		0.751 0.696
fgenesh1_pg.scaffold_70000111
M02342_2.00 		Physcomitrella patens
NNHNATCBN
NVGATNDNN		 PBM
Weirauch et al.(2014)
pTH8492 		0.744 0.696
AT3G16350
M01078_2.00 		Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN		 PBM
Sullivan et al.(2014)
pTH7149 		0.733 0.674
0600010132
M02360_2.00 		Ostreococcus tauri
NNVTTATCCDNNN
NNNHGGATAABNN		 PBM
Weirauch et al.(2014)
pTH9441 		0.731 0.717
PK29550.1
M02358_2.00 		Cannabis sativa
NNHDATCYNN
NNRGATHDNN		 PBM
Weirauch et al.(2014)
pTH9595 		0.723 0.652
AT1G19000
M02287_2.00 		Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN		 PBM
Weirauch et al.(2014)
pTH7120 		0.715 0.696
AT1G19000
M07012_2.00 		Arabidopsis thaliana
HDYHTTATCCAHWW
WWDTGGATAADRHD		 Dap-seq
OMalley et al.(2016)
At1g19000_col_a 		0.715 0.696
AT1G19000
M07013_2.00 		Arabidopsis thaliana
WDYNTTATCCAHWW
WWDTGGATAANRHW		 Dap-seq
OMalley et al.(2016)
At1g19000_colamp_a 		0.715 0.696
KUA1
M02312_2.00 		Arabidopsis thaliana
NNTTATCCDN
NHGGATAANN		 PBM
Weirauch et al.(2014)
pTH7647 		0.695 0.674
KUA1
M07136_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWW
WWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
At5g47390_colamp_a 		0.695 0.674
KUA1
M07137_2.00 		Arabidopsis thaliana
HHWDYHTTATCCAHW
WDTGGATAADRHWDD		 Dap-seq
OMalley et al.(2016)
At5g47390_col_b 		0.695 0.674
AT3G10580
M07072_2.00 		Arabidopsis thaliana
AWBCTTATCYWHWHH
DDWDWRGATAAGVWT		 Dap-seq
OMalley et al.(2016)
AT3G10580_col_a 		0.690 0.630
AT3G10580
M07073_2.00 		Arabidopsis thaliana
CCGAWAAWNTCGGDD
HHCCGANWTTWTCGG		 Dap-seq
OMalley et al.(2016)
AT3G10580_colamp_a 		0.690 0.630
AT5G61620
M07149_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWWN
NWWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
AT5G61620_col_a 		0.685 0.652
AT5G61620
M07150_2.00 		Arabidopsis thaliana
YHTTATCCAHW
WDTGGATAADR		 Dap-seq
OMalley et al.(2016)
AT5G61620_colamp_a 		0.685 0.652
PK00738.1
M02346_2.00 		Cannabis sativa
NYWATCYDNN
NNHRGATWRN		 PBM
Weirauch et al.(2014)
pTH9487 		0.674 0.630
AT1G74840
M02291_2.00 		Arabidopsis thaliana
NGWTATCCRNN
NNYGGATAWCN		 PBM
Weirauch et al.(2014)
pTH7074 		0.669 0.696
AT1G74840
M07037_2.00 		Arabidopsis thaliana
HHTTATCCAHW
WDTGGATAADD		 Dap-seq
OMalley et al.(2016)
At1g74840_col100_a 		0.669 0.696
AT1G74840
M07038_2.00 		Arabidopsis thaliana
HWNHTTATCCAHWW
WWDTGGATAADNWD		 Dap-seq
OMalley et al.(2016)
At1g74840_colamp_a 		0.669 0.696
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_01912 Myb 88 133

Links

Other Myb/SANT family TFs
Other Cicer arietinum TFs

496 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_28813 Aegilops tauschii F775_28813 I
AMTR_s00009p00259320 Amborella trichopoda AMTR_s00009p00259320 I
Aquca_014_00255 Aquilegia coerulea Aquca_014_00255 I
Aquca_014_00941 Aquilegia coerulea Aquca_014_00941 I
ANAC102 Arabidopsis lyrata Al_scaffold_0008_2913 I
ATAF1 Arabidopsis lyrata scaffold_100066.1 I
anac032 Arabidopsis lyrata scaffold_202708.1 I
ATAF2 Arabidopsis lyrata scaffold_600916.1 I
NAC002 Arabidopsis thaliana AT1G01720 D
NAC032 Arabidopsis thaliana AT1G77450 I
NAC081 Arabidopsis thaliana AT5G08790 I
ANAC102 Arabidopsis thaliana AT5G63790 I
Bostr.0568s0429 Boechera stricta Bostr.0568s0429 I
Bostr.13129s0073 Boechera stricta Bostr.13129s0073 I
Bostr.20129s0180 Boechera stricta Bostr.20129s0180 I
Bostr.5325s0094 Boechera stricta Bostr.5325s0094 I
BRADI2G24987 Brachypodium distachyon BRADI2G24987 I
BRADI2G57100 Brachypodium distachyon BRADI2G57100 I
Bo02109s010 Brassica oleracea Bo02109s010 I
Bo2g009250 Brassica oleracea Bo2g009250 I
Bo2g092550 Brassica oleracea Bo2g092550 I
Bo2g165880 Brassica oleracea Bo2g165880 I
Bo3g005100 Brassica oleracea Bo3g005100 I
Bo5g001100 Brassica oleracea Bo5g001100 I
Bo9g174170 Brassica oleracea Bo9g174170 I
Bra006015 Brassica rapa Bra006015 I
Bra008309 Brassica rapa Bra008309 I
Bra009370 Brassica rapa Bra009370 I
Bra028645 Brassica rapa Bra028645 I
Bra029201 Brassica rapa Bra029201 I
Bra033239 Brassica rapa Bra033239 I
Bra038663 Brassica rapa Bra038663 I
PK25206.1 Cannabis sativa PK25206.1 I
PK26157.1 Cannabis sativa PK26157.1 I
Cagra.0096s0087 Capsella grandiflora Cagra.0096s0087 I
Cagra.0248s0059 Capsella grandiflora Cagra.0248s0059 I
Cagra.1365s0094 Capsella grandiflora Cagra.1365s0094 I
Cagra.1968s0112 Capsella grandiflora Cagra.1968s0112 I
Carubv10003254m.g Capsella rubella Carubv10003254m.g I
Carubv10009926m.g Capsella rubella Carubv10009926m.g I
Carubv10020834m.g Capsella rubella Carubv10020834m.g I
Carubv10026953m.g Capsella rubella Carubv10026953m.g I
evm.TU.supercontig_37.28 Carica papaya evm.TU.supercontig_37.28 I
evm.TU.supercontig_64.115 Carica papaya evm.TU.supercontig_64.115 I
Ca_04233 Cicer arietinum Ca_04233 I
Ca_12660 Cicer arietinum Ca_12660 I
Ca_16946 Cicer arietinum Ca_16946 I
Cla014135 Citrullus lanatus Cla014135 I
Cla023536 Citrullus lanatus Cla023536 I
Ciclev10001956m.g Citrus clementina Ciclev10001956m.g I
Ciclev10001976m.g Citrus clementina Ciclev10001976m.g I
orange1.1g021910m.g Citrus sinensis orange1.1g021910m.g I
Cucsa.060600 Cucumis sativus Cucsa.060600 I
Cucsa.125330 Cucumis sativus Cucsa.125330 I
Cucsa.228100 Cucumis sativus Cucsa.228100 I
Eucgr.F04341 Eucalyptus grandis Eucgr.F04341 I
Eucgr.H05089 Eucalyptus grandis Eucgr.H05089 I
Eucgr.I00056 Eucalyptus grandis Eucgr.I00056 I
Eucgr.I00057 Eucalyptus grandis Eucgr.I00057 I
Eucgr.I00058 Eucalyptus grandis Eucgr.I00058 I
Eucgr.I00059 Eucalyptus grandis Eucgr.I00059 I
Eucgr.I00060 Eucalyptus grandis Eucgr.I00060 I
Eucgr.I00095 Eucalyptus grandis Eucgr.I00095 I
Eucgr.I00099 Eucalyptus grandis Eucgr.I00099 I
Eucgr.I00100 Eucalyptus grandis Eucgr.I00100 I
Eucgr.I00101 Eucalyptus grandis Eucgr.I00101 I
Thhalv10004786m.g Eutrema salsugineum Thhalv10004786m.g I
Thhalv10008371m.g Eutrema salsugineum Thhalv10008371m.g I
Thhalv10014325m.g Eutrema salsugineum Thhalv10014325m.g I
Thhalv10018998m.g Eutrema salsugineum Thhalv10018998m.g I
gene09702-v1.0-hybrid Fragaria vesca gene09702-v1.0-hybrid N
gene11226-v1.0-hybrid Fragaria vesca gene11226-v1.0-hybrid I
GLYMA02G26480 Glycine max GLYMA02G26480 I
GLYMA04G38560 Glycine max GLYMA04G38560 I
GLYMA04G42800 Glycine max GLYMA04G42800 I
GLYMA05G32850 Glycine max GLYMA05G32850 I
GLYMA06G11970 Glycine max GLYMA06G11970 I
GLYMA06G16440 Glycine max GLYMA06G16440 I
GLYMA14G24220 Glycine max GLYMA14G24220 I
Gorai.005G088800 Gossypium raimondii Gorai.005G088800 I
Gorai.010G051900 Gossypium raimondii Gorai.010G051900 I
Gorai.012G037600 Gossypium raimondii Gorai.012G037600 I
MLOC_59162 Hordeum vulgare MLOC_59162 I
MLOC_63743 Hordeum vulgare MLOC_63743 I
LPERR01G34090 Leersia perrieri LPERR01G34090 I
LPERR03G32860 Leersia perrieri LPERR03G32860 I
LPERR05G13490 Leersia perrieri LPERR05G13490 I
LPERR11G04670 Leersia perrieri LPERR11G04670 I
Lus10007410.g Linum usitatissimum Lus10007410.g I
Lus10018142.g Linum usitatissimum Lus10018142.g I
Lus10020883.g Linum usitatissimum Lus10020883.g I
Lus10025690.g Linum usitatissimum Lus10025690.g I
Lus10029692.g Linum usitatissimum Lus10029692.g N
Lus10033493.g Linum usitatissimum Lus10033493.g I
Lus10042731.g Linum usitatissimum Lus10042731.g I
chr4.LjT06B21.210.nd Lotus japonicus chr4.LjT06B21.210.nd I
LjT04N09.140.nd Lotus japonicus LjT04N09.140.nd I
MDP0000802924 Malus domestica MDP0000802924 N
cassava28909.valid.m1 Manihot esculenta cassava28909.valid.m1 I
cassava5772.m1 Manihot esculenta cassava5772.m1 I
MTR_3g088110 Medicago truncatula MTR_3g088110 I
MTR_3g096920 Medicago truncatula MTR_3g096920 I
MTR_8g094580 Medicago truncatula MTR_8g094580 I
mgf002183m Mimulus guttatus mgf002183m I
mgf004020m Mimulus guttatus mgf004020m I
mgf015596m Mimulus guttatus mgf015596m I
GSMUA_Achr10G04570_001 Musa acuminata GSMUA_Achr10G04570_001 I
GSMUA_Achr3G18990_001 Musa acuminata GSMUA_Achr3G18990_001 I
GSMUA_Achr5G07590_001 Musa acuminata GSMUA_Achr5G07590_001 I
GSMUA_Achr6G17720_001 Musa acuminata GSMUA_Achr6G17720_001 I
GSMUA_Achr6G18720_001 Musa acuminata GSMUA_Achr6G18720_001 I
GSMUA_Achr6G25380_001 Musa acuminata GSMUA_Achr6G25380_001 I
GSMUA_Achr6G32330_001 Musa acuminata GSMUA_Achr6G32330_001 I
OBART01G39590 Oryza barthii OBART01G39590 I
OBART11G05220 Oryza barthii OBART11G05220 I
OB01G48340 Oryza brachyantha OB01G48340 I
OB05G24820 Oryza brachyantha OB05G24820 I
OB11G14310 Oryza brachyantha OB11G14310 I
ORGLA01G0334900 Oryza glaberrima ORGLA01G0334900 I
ORGLA05G0146600 Oryza glaberrima ORGLA05G0146600 I
ORGLA11G0050000 Oryza glaberrima ORGLA11G0050000 I
OGLUM01G43820 Oryza glumaepatula OGLUM01G43820 I
OGLUM05G17980 Oryza glumaepatula OGLUM05G17980 I
OGLUM11G05010 Oryza glumaepatula OGLUM11G05010 I
BGIOSGA000374 Oryza indica BGIOSGA000374 I
BGIOSGA019897 Oryza indica BGIOSGA019897 I
BGIOSGA034376 Oryza indica BGIOSGA034376 I
BGIOSGA034377 Oryza indica BGIOSGA034377 I
OLONG_000792 Oryza longistaminata OLONG_000792 I
OMERI01G36460 Oryza meridionalis OMERI01G36460 I
OMERI11G04290 Oryza meridionalis OMERI11G04290 I
ONIVA01G44460 Oryza nivara ONIVA01G44460 I
ONIVA05G17670 Oryza nivara ONIVA05G17670 I
ONIVA11G05560 Oryza nivara ONIVA11G05560 I
OPUNC01G34000 Oryza punctata OPUNC01G34000 I
OPUNC01G38300 Oryza punctata OPUNC01G38300 I
OPUNC11G05010 Oryza punctata OPUNC11G05010 I
ORUFI01G42940 Oryza rufipogon ORUFI01G42940 I
ORUFI11G05080 Oryza rufipogon ORUFI11G05080 I
NAC48 Oryza sativa OS01G0884300 D
NAC71 Oryza sativa OS11G0184900 I
Pavir.Ea03233 Panicum virgatum Pavir.Ea03233 I
Pavir.Eb03542 Panicum virgatum Pavir.Eb03542 I
Pavir.Ha00897 Panicum virgatum Pavir.Ha00897 I
Pavir.J04049 Panicum virgatum Pavir.J04049 I
Pavir.J30396 Panicum virgatum Pavir.J30396 I
Pavir.J34979 Panicum virgatum Pavir.J34979 I
POPTR_0002s08150 Populus trichocarpa POPTR_0002s08150 I
POPTR_0005s07060 Populus trichocarpa POPTR_0005s07060 I
POPTR_0005s20240 Populus trichocarpa POPTR_0005s20240 I
POPTR_0007s04780 Populus trichocarpa POPTR_0007s04780 I
Pm004758 Prunus mume Pm004758 I
Pm012630 Prunus mume Pm012630 I
Pm030099 Prunus mume Pm030099 N
PRUPE_ppa009380mg Prunus persica PRUPE_ppa009380mg I
PRUPE_ppa009438mg Prunus persica PRUPE_ppa009438mg I
PRUPE_ppa015363mg Prunus persica PRUPE_ppa015363mg N
29648.m002012 Ricinus communis 29648.m002012 I
30193.m000709 Ricinus communis 30193.m000709 I
SapurV1A.0311s0230 Salix purpurea SapurV1A.0311s0230 I
SapurV1A.0365s0200 Salix purpurea SapurV1A.0365s0200 I
SapurV1A.0740s0040 Salix purpurea SapurV1A.0740s0040 I
SapurV1A.2021s0010 Salix purpurea SapurV1A.2021s0010 I
SapurV1A.3767s0010 Salix purpurea SapurV1A.3767s0010 I
SELMODRAFT_108667 Selaginella moellendorffii SELMODRAFT_108667 I
SELMODRAFT_147012 Selaginella moellendorffii SELMODRAFT_147012 I
Si002413m.g Setaria italica Si002413m.g I
Si022381m.g Setaria italica Si022381m.g I
Si026342m.g Setaria italica Si026342m.g I
Solyc04g009440.2 Solanum lycopersicum Solyc04g009440.2 I
Solyc06g060230.2 Solanum lycopersicum Solyc06g060230.2 I
Solyc11g017470.1 Solanum lycopersicum Solyc11g017470.1 I
PGSC0003DMG400009245 Solanum tuberosum PGSC0003DMG400009245 I
PGSC0003DMG400017567 Solanum tuberosum PGSC0003DMG400017567 I
PGSC0003DMG400032555 Solanum tuberosum PGSC0003DMG400032555 I
Sb03g037940 Sorghum bicolor Sb03g037940 I
Sb03g041920 Sorghum bicolor Sb03g041920 I
Sb05g005450 Sorghum bicolor Sb05g005450 I
Sb09g020750 Sorghum bicolor Sb09g020750 I
TCM_001595 Theobroma cacao TCM_001595 I
TCM_035160 Theobroma cacao TCM_035160 I
TRAES3BF002300010CFD_g Triticum aestivum TRAES3BF002300010CFD_g I
TRIUR3_14109 Triticum urartu TRIUR3_14109 I
VIT_07s0031g02610 Vitis vinifera VIT_07s0031g02610 I
anac032 Vitis vinifera VIT_18s0001g02300 I
GRMZM2G014653 Zea mays GRMZM2G014653 I
GRMZM2G068973 Zea mays GRMZM2G068973 I
GRMZM2G123667 Zea mays GRMZM2G123667 I
GRMZM2G180328 Zea mays GRMZM2G180328 I
GRMZM2G312201 Zea mays GRMZM2G312201 N