CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_06236
(
Cicer arietinum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Ca_06236
T282957_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GAM1_ORYSI
M11055_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GAMYB_Q2
0.743
0.739
Gam1
M02703_2.00
Hordeum vulgare
NVYAACSGMC
GKCSGTTRBN
SELEX
Mathelier et al.(2014)
MA0034.1
0.726
0.728
Gam1
M11061_2.00
Hordeum vulgare
YAACSRHM
KDYSGTTR
Transfac
Matys et al.(2006)
P$GAMYB_01
0.726
0.728
ATMYB65
M01076_2.00
Arabidopsis thaliana
HAACNRHHN
NDDYNGTTD
PBM
Sullivan et al.(2014)
pTH7084
0.697
0.674
ATMYB65
M07076_2.00
Arabidopsis thaliana
DHHNTAACBGHMW
WKDCVGTTANDDH
Dap-seq
OMalley et al.(2016)
MYB65_col200_a
0.697
0.674
ATMYB65
M07077_2.00
Arabidopsis thaliana
NTAACYGHMWHNDHN
NDHNDWKDCRGTTAN
Dap-seq
OMalley et al.(2016)
MYB65_colamp_a
0.697
0.674
MYB33
M02306_2.00
Arabidopsis thaliana
HAACNRHHNN
NNDDYNGTTD
PBM
Weirauch et al.(2014)
pTH8204
0.684
0.663
MYB33
M07120_2.00
Arabidopsis thaliana
NTAACYGWHWH
DWDWCRGTTAN
Dap-seq
OMalley et al.(2016)
MYB33_col_a
0.684
0.663
MYB101
M07051_2.00
Arabidopsis thaliana
NWHHNWAACCGWWHH
DDWWCGGTTWNDDWN
Dap-seq
OMalley et al.(2016)
MYB101_col_a
0.682
0.707
MYB101
M07052_2.00
Arabidopsis thaliana
DHHHVTAACYGWHWN
NWDWCRGTTABDDDH
Dap-seq
OMalley et al.(2016)
MYB101_colamp_a
0.682
0.707
Q9FR42_TOBAC
M11076_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYBAS1_01
0.677
0.685
myb.Ph3
M02704_2.00
Petunia x hybrida
WAACNGTYW
WRACNGTTW
SELEX
Mathelier et al.(2014)
MA0054.1
0.676
0.717
myb.Ph3
M11070_2.00
Petunia x hybrida
RTAACSGTTTYHW
WDRAAACSGTTAY
Transfac
Matys et al.(2006)
P$MYBPH3_01
0.676
0.717
myb.Ph3
M11071_2.00
Petunia x hybrida
STAACTAACTHHH
DDDAGTTAGTTAS
Transfac
Matys et al.(2006)
P$MYBPH3_02
0.676
0.717
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_06236
Myb
76
123
KGSWTPAEDAILVEYVQKYGEGNWSAVQKIFGLARCGKSCRLRWTNHL
Ca_06236
Myb
129
173
KDAFTAEEEKLLIEQHYLLRNKWSRIALSLPGRTDNEIKNYWHTR
Links
Other
Myb/SANT
family TFs
Other
Cicer arietinum
TFs
197 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_12826
Cicer arietinum
Ca_12826
I
0.762
Ca_15422
Cicer arietinum
Ca_15422
I
0.753
GAM1
Oryza indica
BGIOSGA004670
I
0.743
GAM1_ORYSI
Oryza sativa
GAM1_ORYSI
D
0.743
OB01G43550
Oryza brachyantha
OB01G43550
I
0.743
OBART01G34660
Oryza barthii
OBART01G34660
I
0.743
OGLUM01G20920
Oryza glumaepatula
OGLUM01G20920
I
0.743
OLONG_020610
Oryza longistaminata
OLONG_020610
I
0.743
OMERI01G31990
Oryza meridionalis
OMERI01G31990
I
0.743
GAMYB
Oryza sativa
OS01G0812000
I
0.743
VIT_13s0067g01630
Vitis vinifera
VIT_13s0067g01630
I
0.743
Eucgr.G03183
Eucalyptus grandis
Eucgr.G03183
I
0.740
GLYMA13G25716
Glycine max
GLYMA13G25716
I
0.731
Cucsa.364400
Cucumis sativus
Cucsa.364400
I
0.731
mgf002965m
Mimulus guttatus
mgf002965m
I
0.729
chr3.CM0005.370.nc
Lotus japonicus
chr3.CM0005.370.nc
I
0.729
BRADI2G53010
Brachypodium distachyon
BRADI2G53010
I
0.726
F775_28392
Aegilops tauschii
F775_28392
I
0.726
GRMZM2G139688
Zea mays
GRMZM2G139688
I
0.726
Gam1
Hordeum vulgare
Q96464_HORVU
D
0.726
Si000907m.g
Setaria italica
Si000907m.g
I
0.726
TRAES3BF027700010CFD_g
Triticum aestivum
TRAES3BF027700010CFD_g
I
0.726
TRIUR3_27104
Triticum urartu
TRIUR3_27104
I
0.726
Pavir.Ea03206
Panicum virgatum
Pavir.Ea03206
I
0.726
Ca_20081
Cicer arietinum
Ca_20081
I
0.725
Ca_25013
Cicer arietinum
Ca_25013
I
0.725
mgf025568m
Mimulus guttatus
mgf025568m
I
0.725
GSMUA_Achr1G17150_001
Musa acuminata
GSMUA_Achr1G17150_001
I
0.723
POPTR_0001s07330
Populus trichocarpa
POPTR_0001s07330
I
0.723
POPTR_0003s18900
Populus trichocarpa
POPTR_0003s18900
I
0.723
PRUPE_ppa003628mg
Prunus persica
PRUPE_ppa003628mg
I
0.723
TCM_044611
Theobroma cacao
TCM_044611
I
0.723
Pm016605
Prunus mume
Pm016605
I
0.723
29686.m000890
Ricinus communis
29686.m000890
I
0.723
cassava1461.valid.m1
Manihot esculenta
cassava1461.valid.m1
I
0.723
evm.TU.supercontig_33.151
Carica papaya
evm.TU.supercontig_33.151
I
0.723
gene00431-v1.0-hybrid
Fragaria vesca
gene00431-v1.0-hybrid
I
0.723
Gorai.010G212500
Gossypium raimondii
Gorai.010G212500
I
0.723
Gorai.012G022000
Gossypium raimondii
Gorai.012G022000
I
0.723
Lus10008685.g
Linum usitatissimum
Lus10008685.g
I
0.723
Lus10026142.g
Linum usitatissimum
Lus10026142.g
I
0.723
SapurV1A.0369s0230
Salix purpurea
SapurV1A.0369s0230
I
0.723
SapurV1A.0537s0200
Salix purpurea
SapurV1A.0537s0200
I
0.723
Lus10026787.g
Linum usitatissimum
Lus10026787.g
I
0.721
Lus10036103.g
Linum usitatissimum
Lus10036103.g
I
0.721
MTR_3g052430
Medicago truncatula
MTR_3g052430
I
0.720
29785.m000932
Ricinus communis
29785.m000932
I
0.719
Aquca_014_00928
Aquilegia coerulea
Aquca_014_00928
I
0.719
Gorai.009G301100
Gossypium raimondii
Gorai.009G301100
I
0.718
MTR_3g011610
Medicago truncatula
MTR_3g011610
I
0.717
AMTR_s00038p00150140
Amborella trichopoda
AMTR_s00038p00150140
I
0.716
MTR_8g042410
Medicago truncatula
MTR_8g042410
I
0.716
SELMODRAFT_128781
Selaginella moellendorffii
SELMODRAFT_128781
I
0.716
SELMODRAFT_81112
Selaginella moellendorffii
SELMODRAFT_81112
I
0.716
cassava40302.m1
Manihot esculenta
cassava40302.m1
I
0.716
Pavir.Eb03517
Panicum virgatum
Pavir.Eb03517
I
0.716
GLYMA08G42955
Glycine max
GLYMA08G42955
I
0.714
Ca_21739
Cicer arietinum
Ca_21739
I
0.714
MDP0000175835
Malus domestica
MDP0000175835
I
0.712
AMTR_s00037p00177500
Amborella trichopoda
AMTR_s00037p00177500
I
0.708
GLYMA15G35860
Glycine max
GLYMA15G35860
I
0.707
PGSC0003DMG400005918
Solanum tuberosum
PGSC0003DMG400005918
I
0.707
SELMODRAFT_117411
Selaginella moellendorffii
SELMODRAFT_117411
I
0.707
SELMODRAFT_84369
Selaginella moellendorffii
SELMODRAFT_84369
I
0.707
Solyc06g073640.2
Solanum lycopersicum
Solyc06g073640.2
I
0.707
Thhalv10013329m.g
Eutrema salsugineum
Thhalv10013329m.g
I
0.707
PGSC0003DMG400013897
Solanum tuberosum
PGSC0003DMG400013897
I
0.706
VIT_19s0090g00590
Vitis vinifera
VIT_19s0090g00590
I
0.706
Cla005406
Citrullus lanatus
Cla005406
I
0.706
Cucsa.060080
Cucumis sativus
Cucsa.060080
I
0.706
MDP0000151688
Malus domestica
MDP0000151688
I
0.706
MDP0000176798
Malus domestica
MDP0000176798
I
0.706
LjSGA_026914.2
Lotus japonicus
LjSGA_026914.2
I
0.706
GLYMA08G42920
Glycine max
GLYMA08G42920
I
0.705
GLYMA12G31950
Glycine max
GLYMA12G31950
I
0.704
GLYMA13G38521
Glycine max
GLYMA13G38521
I
0.704
PRUPE_ppa017451mg
Prunus persica
PRUPE_ppa017451mg
I
0.704
Ca_07119
Cicer arietinum
Ca_07119
I
0.704
Pm015094
Prunus mume
Pm015094
I
0.704
Bostr.13129s0364
Boechera stricta
Bostr.13129s0364
I
0.704
Cagra.2117s0052
Capsella grandiflora
Cagra.2117s0052
I
0.704
Carubv10000715m.g
Capsella rubella
Carubv10000715m.g
I
0.704
GSMUA_AchrUn_randomG15100_001
Musa acuminata
GSMUA_AchrUn_randomG15100_001
I
0.702
cassava30977.valid.m1
Manihot esculenta
cassava30977.valid.m1
I
0.702
PDK_20s1831811g001
Phoenix dactylifera
PDK_20s1831811g001
I
0.702
GLYMA18G10921
Glycine max
GLYMA18G10921
I
0.701
Cla013880
Citrullus lanatus
Cla013880
I
0.701
LjT02G13.10.nc
Lotus japonicus
LjT02G13.10.nc
I
0.701
Sb03g037680
Sorghum bicolor
Sb03g037680
I
0.700
MYB33
Arabidopsis lyrata
fgenesh2_kg.6__546__AT5G06100.3
I
0.699
POPTR_0009s02380
Populus trichocarpa
POPTR_0009s02380
I
0.699
cassava44767.m1
Manihot esculenta
cassava44767.m1
I
0.699
Bra022888
Brassica rapa
Bra022888
I
0.698
ATMYB65
Arabidopsis thaliana
AT3G11440
D
0.697
Bo5g136570
Brassica oleracea
Bo5g136570
I
0.697
Bra034842
Brassica rapa
Bra034842
I
0.697
ATMYB65
Arabidopsis lyrata
fgenesh2_kg.3__1182__AT3G11440.1
I
0.697
PRUPE_ppa022465mg
Prunus persica
PRUPE_ppa022465mg
I
0.697
Bostr.19424s1075
Boechera stricta
Bostr.19424s1075
I
0.697
Cagra.1655s0026
Capsella grandiflora
Cagra.1655s0026
I
0.697
Carubv10013393m.g
Capsella rubella
Carubv10013393m.g
I
0.697
gene03321-v1.0-hybrid
Fragaria vesca
gene03321-v1.0-hybrid
I
0.697
MTR_3g052450
Medicago truncatula
MTR_3g052450
I
0.696
Ciclev10000756m.g
Citrus clementina
Ciclev10000756m.g
I
0.696
Ciclev10010620m.g
Citrus clementina
Ciclev10010620m.g
I
0.696
orange1.1g011938m.g
Citrus sinensis
orange1.1g011938m.g
I
0.696
orange1.1g046419m.g
Citrus sinensis
orange1.1g046419m.g
I
0.696
SapurV1A.1951s0020
Salix purpurea
SapurV1A.1951s0020
I
0.696
Aquca_005_00025
Aquilegia coerulea
Aquca_005_00025
I
0.695
LPERR05G16930
Leersia perrieri
LPERR05G16930
I
0.692
evm.TU.supercontig_34.210
Carica papaya
evm.TU.supercontig_34.210
I
0.692
Thhalv10020455m.g
Eutrema salsugineum
Thhalv10020455m.g
I
0.691
PGSC0003DMG400027418
Solanum tuberosum
PGSC0003DMG400027418
I
0.690
MTR_2g088170
Medicago truncatula
MTR_2g088170
I
0.688
MTR_1g021230
Medicago truncatula
MTR_1g021230
I
0.687
mgf010934m
Mimulus guttatus
mgf010934m
I
0.687
mgf019173m
Mimulus guttatus
mgf019173m
I
0.687
gene23946-v1.0-hybrid
Fragaria vesca
gene23946-v1.0-hybrid
I
0.687
TCM_041010
Theobroma cacao
TCM_041010
I
0.686
PGSC0003DMG400028949
Solanum tuberosum
PGSC0003DMG400028949
I
0.685
Solyc07g052300.2
Solanum lycopersicum
Solyc07g052300.2
I
0.685
MYB33
Arabidopsis thaliana
AT5G06100
D
0.684
MDP0000147309
Malus domestica
MDP0000147309
I
0.684
SapurV1A.0008s0050
Salix purpurea
SapurV1A.0008s0050
I
0.683
MYB101
Arabidopsis thaliana
AT2G32460
D
0.682
Bo3g026690
Brassica oleracea
Bo3g026690
I
0.682
Bo4g046000
Brassica oleracea
Bo4g046000
I
0.682
Bo4g178040
Brassica oleracea
Bo4g178040
I
0.682
Bra005597
Brassica rapa
Bra005597
I
0.682
Bra021791
Brassica rapa
Bra021791
I
0.682
MYB101
Arabidopsis lyrata
fgenesh2_kg.4__1233__AT2G32460.2
I
0.682
Bostr.23794s0867
Boechera stricta
Bostr.23794s0867
I
0.682
Cagra.0352s0034
Capsella grandiflora
Cagra.0352s0034
I
0.682
Carubv10025227m.g
Capsella rubella
Carubv10025227m.g
I
0.682
Ciclev10014958m.g
Citrus clementina
Ciclev10014958m.g
I
0.682
orange1.1g039708m.g
Citrus sinensis
orange1.1g039708m.g
I
0.682
Thhalv10016567m.g
Eutrema salsugineum
Thhalv10016567m.g
I
0.682
gene03323-v1.0-hybrid
Fragaria vesca
gene03323-v1.0-hybrid
I
0.681
Gorai.006G121900
Gossypium raimondii
Gorai.006G121900
I
0.681
MDP0000179306
Malus domestica
MDP0000179306
I
0.681
Lus10040063.g
Linum usitatissimum
Lus10040063.g
I
0.679
GLYMA06G47000
Glycine max
GLYMA06G47000
I
0.677
GLYMA13G04031
Glycine max
GLYMA13G04031
I
0.677
Q9FR42_TOBAC
Nicotiana tabacum
Q9FR42_TOBAC
D
0.677
gw1.238.44.1
Physcomitrella patens
gw1.238.44.1
I
0.677
gw1.66.160.1
Physcomitrella patens
gw1.66.160.1
I
0.677
myb.Ph3
Petunia x hybrida
Q02994_PETHY
D
0.676
LjSGA_057622.2
Lotus japonicus
LjSGA_057622.2
I
0.675
PK15478.1
Cannabis sativa
PK15478.1
I
0.674
TCM_011907
Theobroma cacao
TCM_011907
I
0.673
Traes_1BL_CF98E922B
Triticum aestivum
Traes_1BL_CF98E922B
I
0.673
TRIUR3_17275
Triticum urartu
TRIUR3_17275
I
0.673
evm.TU.supercontig_12.292
Carica papaya
evm.TU.supercontig_12.292
I
0.673
SapurV1A.0014s1240
Salix purpurea
SapurV1A.0014s1240
I
0.673
SapurV1A.1897s0070
Salix purpurea
SapurV1A.1897s0070
I
0.673
SapurV1A.2567s0040
Salix purpurea
SapurV1A.2567s0040
I
0.673
29823.m000215
Ricinus communis
29823.m000215
I
0.671
mgf023205m
Mimulus guttatus
mgf023205m
I
0.671
gene31098-v1.0-hybrid
Fragaria vesca
gene31098-v1.0-hybrid
I
0.671
MDP0000167314
Malus domestica
MDP0000167314
I
0.671
MDP0000264051
Malus domestica
MDP0000264051
I
0.671
PK01088.1
Cannabis sativa
PK01088.1
I
0.671
Cla007782
Citrullus lanatus
Cla007782
I
0.670
Cucsa.148580
Cucumis sativus
Cucsa.148580
I
0.670
Lus10021539.g
Linum usitatissimum
Lus10021539.g
I
0.670
VIT_06s0009g02480
Vitis vinifera
VIT_06s0009g02480
I
0.669
BGIOSGA017818
Oryza indica
BGIOSGA017818
I
0.668
OBART05G21120
Oryza barthii
OBART05G21120
I
0.668
OGLUM05G22330
Oryza glumaepatula
OGLUM05G22330
I
0.668
OPUNC05G18800
Oryza punctata
OPUNC05G18800
I
0.668
ORUFI05G22370
Oryza rufipogon
ORUFI05G22370
I
0.668
OS05G0490600
Oryza sativa
OS05G0490600
I
0.668
PDK_20s1383724g001
Phoenix dactylifera
PDK_20s1383724g001
I
0.668
Bo1g141040
Brassica oleracea
Bo1g141040
I
0.667
Bra002042
Brassica rapa
Bra002042
I
0.667
MYB101
Populus trichocarpa
POPTR_0002s21300
I
0.667
PRUPE_ppa019943mg
Prunus persica
PRUPE_ppa019943mg
I
0.667
Cla016951
Citrullus lanatus
Cla016951
I
0.667
Pm027586
Prunus mume
Pm027586
I
0.667
cassava32672.m1
Manihot esculenta
cassava32672.m1
I
0.667
Eucgr.C01374
Eucalyptus grandis
Eucgr.C01374
I
0.667
GSMUA_Achr4G23690_001
Musa acuminata
GSMUA_Achr4G23690_001
I
0.665
ATMYB120
Arabidopsis thaliana
AT5G55020
I
0.664
Bra002938
Brassica rapa
Bra002938
I
0.664
F775_23034
Aegilops tauschii
F775_23034
I
0.664
MLOC_6041
Hordeum vulgare
MLOC_6041
I
0.664
OLONG_019401
Oryza longistaminata
OLONG_019401
I
0.664
TRIUR3_20797
Triticum urartu
TRIUR3_20797
I
0.664
mgf020500m
Mimulus guttatus
mgf020500m
I
0.664
Bostr.26833s0761
Boechera stricta
Bostr.26833s0761
I
0.664
Cagra.1629s0073
Capsella grandiflora
Cagra.1629s0073
I
0.664
Carubv10026070m.g
Capsella rubella
Carubv10026070m.g
I
0.664
Thhalv10013018m.g
Eutrema salsugineum
Thhalv10013018m.g
I
0.664
Bra012038
Brassica rapa
Bra012038
I
0.662
PGSC0003DMG400022689
Solanum tuberosum
PGSC0003DMG400022689
I
0.661
SELMODRAFT_38120
Selaginella moellendorffii
SELMODRAFT_38120
I
0.661
Solyc01g009070.2
Solanum lycopersicum
Solyc01g009070.2
I
0.661