CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_14247
(
Cicer arietinum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Ca_14247
T283035_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK27213.1
M01284_2.00
Cannabis sativa
NHWATCNNNN
NNNNGATWDN
PBM
Lambert et al.(2019)
pTH10196
0.775
0.849
PK27213.1
M02356_2.00
Cannabis sativa
NHHATCNNNN
NNNNGATDDN
PBM
Weirauch et al.(2014)
pTH9600
0.775
0.849
PK27693.1
M01285_2.00
Cannabis sativa
NNYTATCBNN
NNVGATARNN
PBM
Lambert et al.(2019)
pTH11302
0.764
0.882
AT2G38090
M07055_2.00
Arabidopsis thaliana
HHBAWNYTTATCYWNWHYNBN
NVNRDWNWRGATAARNWTVDD
Dap-seq
OMalley et al.(2016)
At2g38090_col_a
0.699
0.817
AT5G58900
M07146_2.00
Arabidopsis thaliana
HHWWYCTTATCYWHW
WDWRGATAAGRWWDD
Dap-seq
OMalley et al.(2016)
At5g58900_col_a
0.693
0.817
AT5G58900
M07147_2.00
Arabidopsis thaliana
HWYMTTATCHWNWWH
DWWNWDGATAAKRWD
Dap-seq
OMalley et al.(2016)
At5g58900_colamp_a
0.693
0.817
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_14247
Myb
126
173
GVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYF
Links
Other
Myb/SANT
family TFs
Other
Cicer arietinum
TFs
105 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_3g462790
Medicago truncatula
MTR_3g462790
I
0.845
GLYMA02G39000
Glycine max
GLYMA02G39000
I
0.840
GLYMA14G37050
Glycine max
GLYMA14G37050
I
0.840
MTR_5g069710
Medicago truncatula
MTR_5g069710
I
0.835
Ca_15603
Cicer arietinum
Ca_15603
I
0.829
GLYMA11G22960
Glycine max
GLYMA11G22960
I
0.824
Aquca_009_00736
Aquilegia coerulea
Aquca_009_00736
I
0.799
PGSC0003DMG400030348
Solanum tuberosum
PGSC0003DMG400030348
I
0.790
Solyc06g076770.2
Solanum lycopersicum
Solyc06g076770.2
I
0.790
Aquca_004_00289
Aquilegia coerulea
Aquca_004_00289
I
0.790
evm.TU.supercontig_112.58
Carica papaya
evm.TU.supercontig_112.58
I
0.790
Gorai.009G093700
Gossypium raimondii
Gorai.009G093700
I
0.787
cassava23356.valid.m1
Manihot esculenta
cassava23356.valid.m1
I
0.785
gene07984-v1.0-hybrid
Fragaria vesca
gene07984-v1.0-hybrid
I
0.785
GLYMA18G07250
Glycine max
GLYMA18G07250
I
0.779
29681.m001296
Ricinus communis
29681.m001296
I
0.779
Pm000529
Prunus mume
Pm000529
I
0.775
PK27213.1
Cannabis sativa
PK27213.1
D
0.775
Ciclev10028910m.g
Citrus clementina
Ciclev10028910m.g
I
0.773
orange1.1g021816m.g
Citrus sinensis
orange1.1g021816m.g
I
0.773
TCM_041672
Theobroma cacao
TCM_041672
I
0.770
PRUPE_ppa009072mg
Prunus persica
PRUPE_ppa009072mg
I
0.766
PK27693.1
Cannabis sativa
PK27693.1
D
0.764
Lus10040696.g
Linum usitatissimum
Lus10040696.g
I
0.761
Ciclev10012285m.g
Citrus clementina
Ciclev10012285m.g
I
0.750
Lus10018209.g
Linum usitatissimum
Lus10018209.g
I
0.750
orange1.1g021756m.g
Citrus sinensis
orange1.1g021756m.g
I
0.750
VIT_08s0007g01920
Vitis vinifera
VIT_08s0007g01920
I
0.749
POPTR_0009s04730
Populus trichocarpa
POPTR_0009s04730
I
0.747
VIT_06s0004g06100
Vitis vinifera
VIT_06s0004g06100
I
0.744
POPTR_0001s25590
Populus trichocarpa
POPTR_0001s25590
I
0.740
cassava23290.valid.m1
Manihot esculenta
cassava23290.valid.m1
I
0.740
MDP0000243328
Malus domestica
MDP0000243328
I
0.739
MDP0000255630
Malus domestica
MDP0000255630
I
0.739
MDP0000292581
Malus domestica
MDP0000292581
I
0.739
MTR_7g067080
Medicago truncatula
MTR_7g067080
I
0.737
Ca_19327
Cicer arietinum
Ca_19327
I
0.737
mgf022442m
Mimulus guttatus
mgf022442m
I
0.736
SapurV1A.0041s0720
Salix purpurea
SapurV1A.0041s0720
I
0.731
SapurV1A.0164s0380
Salix purpurea
SapurV1A.0164s0380
I
0.731
MDP0000142580
Malus domestica
MDP0000142580
I
0.729
MDP0000221993
Malus domestica
MDP0000221993
I
0.729
GLYMA01G27720
Glycine max
GLYMA01G27720
I
0.721
GLYMA03G14440
Glycine max
GLYMA03G14440
I
0.721
Bra002610
Brassica rapa
Bra002610
I
0.717
GLYMA07G17660
Glycine max
GLYMA07G17660
I
0.717
GLYMA18G42530
Glycine max
GLYMA18G42530
I
0.717
cassava30173.valid.m1
Manihot esculenta
cassava30173.valid.m1
I
0.717
Bo3g032160
Brassica oleracea
Bo3g032160
I
0.716
Bra000038
Brassica rapa
Bra000038
I
0.716
Cla013553
Citrullus lanatus
Cla013553
I
0.715
Eucgr.B02800
Eucalyptus grandis
Eucgr.B02800
I
0.715
Eucgr.J01940
Eucalyptus grandis
Eucgr.J01940
I
0.713
TCM_021750
Theobroma cacao
TCM_021750
I
0.708
cassava43688.valid.m1
Manihot esculenta
cassava43688.valid.m1
I
0.708
Gorai.002G261600
Gossypium raimondii
Gorai.002G261600
I
0.708
Gorai.012G112000
Gossypium raimondii
Gorai.012G112000
I
0.708
Cucsa.164580
Cucumis sativus
Cucsa.164580
I
0.705
POPTR_0016s11980
Populus trichocarpa
POPTR_0016s11980
I
0.704
Cucsa.139090
Cucumis sativus
Cucsa.139090
I
0.704
AT2G38090
Arabidopsis thaliana
AT2G38090
D
0.699
Bo4g029810
Brassica oleracea
Bo4g029810
I
0.699
Bo4g187390
Brassica oleracea
Bo4g187390
I
0.699
Bra005139
Brassica rapa
Bra005139
I
0.699
Bra017138
Brassica rapa
Bra017138
I
0.699
28288.m000014
Ricinus communis
28288.m000014
I
0.699
Bostr.23794s0264
Boechera stricta
Bostr.23794s0264
I
0.699
Cagra.0090s0025
Capsella grandiflora
Cagra.0090s0025
I
0.699
Carubv10023736m.g
Capsella rubella
Carubv10023736m.g
I
0.699
POPTR_0006s09860
Populus trichocarpa
POPTR_0006s09860
I
0.695
PRUPE_ppa009103mg
Prunus persica
PRUPE_ppa009103mg
I
0.695
Pm002536
Prunus mume
Pm002536
I
0.695
Thhalv10014270m.g
Eutrema salsugineum
Thhalv10014270m.g
I
0.695
AT5G58900
Arabidopsis thaliana
AT5G58900
D
0.693
fgenesh2_kg.8__1829__AT5G58900.1
Arabidopsis lyrata
fgenesh2_kg.8__1829__AT5G58900.1
I
0.693
Bostr.26833s0356
Boechera stricta
Bostr.26833s0356
I
0.693
Cagra.0891s0087
Capsella grandiflora
Cagra.0891s0087
I
0.693
Carubv10026903m.g
Capsella rubella
Carubv10026903m.g
I
0.693
evm.TU.supercontig_1130.1
Carica papaya
evm.TU.supercontig_1130.1
I
0.693
PGSC0003DMG400019129
Solanum tuberosum
PGSC0003DMG400019129
I
0.690
SapurV1A.0778s0020
Salix purpurea
SapurV1A.0778s0020
I
0.688
SapurV1A.3589s0010
Salix purpurea
SapurV1A.3589s0010
I
0.688
AMTR_s00029p00215750
Amborella trichopoda
AMTR_s00029p00215750
N
0.687
Cla004397
Citrullus lanatus
Cla004397
I
0.687
gene18815-v1.0-hybrid
Fragaria vesca
gene18815-v1.0-hybrid
I
0.685
SapurV1A.0001s0790
Salix purpurea
SapurV1A.0001s0790
I
0.684
Bo3g018460
Brassica oleracea
Bo3g018460
I
0.682
Bra006741
Brassica rapa
Bra006741
I
0.682
GLYMA02G42140
Glycine max
GLYMA02G42140
I
0.679
Bo9g135730
Brassica oleracea
Bo9g135730
I
0.677
GSMUA_Achr10G02290_001
Musa acuminata
GSMUA_Achr10G02290_001
I
0.676
fgenesh2_kg.4__1876__AT2G38090.1
Arabidopsis lyrata
fgenesh2_kg.4__1876__AT2G38090.1
I
0.675
Solyc10g076820.1
Solanum lycopersicum
Solyc10g076820.1
I
0.675
Cucsa.176140
Cucumis sativus
Cucsa.176140
I
0.675
Thhalv10017008m.g
Eutrema salsugineum
Thhalv10017008m.g
I
0.675
Gorai.006G180900
Gossypium raimondii
Gorai.006G180900
I
0.673
MTR_5g081860
Medicago truncatula
MTR_5g081860
I
0.672
Ca_12513
Cicer arietinum
Ca_12513
I
0.672
GLYMA20G16630
Glycine max
GLYMA20G16630
N
0.671
GLYMA11G34930
Glycine max
GLYMA11G34930
I
0.666
GLYMA18G03430
Glycine max
GLYMA18G03430
I
0.666
Cla018243
Citrullus lanatus
Cla018243
I
0.664
Cucsa.364590
Cucumis sativus
Cucsa.364590
N
0.663
evm.TU.supercontig_19.216
Carica papaya
evm.TU.supercontig_19.216
I
0.663
Thhalv10014370m.g
Eutrema salsugineum
Thhalv10014370m.g
I
0.662