Cla006831 (Citrullus lanatus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cla006831 T283172_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla006831 Myb 12 59
Cla006831 Myb 66 110

Links

Other Myb/SANT family TFs
Other Citrullus lanatus TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.121070 Cucumis sativus Cucsa.121070 N 0.856
LjT36B17.50.nd Lotus japonicus LjT36B17.50.nd N 0.851
TCM_005653 Theobroma cacao TCM_005653 N 0.839
Cagra.3527s0008 Capsella grandiflora Cagra.3527s0008 N 0.839
Carubv10019483m.g Capsella rubella Carubv10019483m.g N 0.839
evm.TU.supercontig_37.96 Carica papaya evm.TU.supercontig_37.96 N 0.839
Bo8g095200 Brassica oleracea Bo8g095200 N 0.825
Bra007536 Brassica rapa Bra007536 N 0.825
MDP0000237596 Malus domestica MDP0000237596 N 0.825
MDP0000319634 Malus domestica MDP0000319634 N 0.825
Pm017596 Prunus mume Pm017596 N 0.822
30174.m008784 Ricinus communis 30174.m008784 N 0.822
BGIOSGA016880 Oryza indica BGIOSGA016880 N 0.816
OB04G27810 Oryza brachyantha OB04G27810 N 0.816
OBART04G20790 Oryza barthii OBART04G20790 N 0.816
OGLUM04G20730 Oryza glumaepatula OGLUM04G20730 N 0.816
OMERI04G17240 Oryza meridionalis OMERI04G17240 N 0.816
ONIVA04G19030 Oryza nivara ONIVA04G19030 N 0.816
OPUNC04G18480 Oryza punctata OPUNC04G18480 N 0.816
ORGLA04G0178400 Oryza glaberrima ORGLA04G0178400 N 0.816
ORUFI04G22380 Oryza rufipogon ORUFI04G22380 N 0.816
gene04800-v1.0-hybrid Fragaria vesca gene04800-v1.0-hybrid N 0.816
DUO1 Arabidopsis thaliana AT3G60460 N 0.815
Bra003413 Brassica rapa Bra003413 N 0.815
DUO1 Arabidopsis lyrata fgenesh2_kg.5__2511__AT3G60460.1 N 0.815
mgf019330m Mimulus guttatus mgf019330m N 0.815
Bostr.13158s0042 Boechera stricta Bostr.13158s0042 N 0.815
Si012032m.g Setaria italica Si012032m.g N 0.812
Pavir.Gb01130 Panicum virgatum Pavir.Gb01130 N 0.812
Eucgr.E01581 Eucalyptus grandis Eucgr.E01581 N 0.810
MTR_4g029540 Medicago truncatula MTR_4g029540 N 0.809
POPTR_0002s14180 Populus trichocarpa POPTR_0002s14180 N 0.809
SapurV1A.0033s0200 Salix purpurea SapurV1A.0033s0200 N 0.809
cassava19913.m1 Manihot esculenta cassava19913.m1 N 0.807
Bo6g077030 Brassica oleracea Bo6g077030 N 0.806
Pavir.Fb01900 Panicum virgatum Pavir.Fb01900 N 0.806
Pavir.J30013 Panicum virgatum Pavir.J30013 N 0.804
Pavir.J35399 Panicum virgatum Pavir.J35399 N 0.804
SapurV1A.0490s0170 Salix purpurea SapurV1A.0490s0170 N 0.803
PRUPE_ppa020326mg Prunus persica PRUPE_ppa020326mg N 0.801
Solyc01g090530.1 Solanum lycopersicum Solyc01g090530.1 N 0.801
Traes_2AL_0A21FB42C Triticum aestivum Traes_2AL_0A21FB42C N 0.801
Traes_2BL_855A1170C Triticum aestivum Traes_2BL_855A1170C N 0.801
gene12261-v1.0-hybrid Fragaria vesca gene12261-v1.0-hybrid N 0.799
Thhalv10006475m.g Eutrema salsugineum Thhalv10006475m.g N 0.799
GLYMA03G26830 Glycine max GLYMA03G26830 N 0.798
PGSC0003DMG400025720 Solanum tuberosum PGSC0003DMG400025720 N 0.798
DUO1 Vitis vinifera VIT_15s0021g02040 N 0.798
Ciclev10021345m.g Citrus clementina Ciclev10021345m.g N 0.798
orange1.1g038795m.g Citrus sinensis orange1.1g038795m.g N 0.798
MTR_8g006470 Medicago truncatula MTR_8g006470 N 0.797
GRMZM2G105137 Zea mays GRMZM2G105137 N 0.796
POPTR_0014s05370 Populus trichocarpa POPTR_0014s05370 N 0.796
POPTR_0014s05420 Populus trichocarpa POPTR_0014s05420 N 0.796
Gorai.004G165400 Gossypium raimondii Gorai.004G165400 N 0.791
GLYMA07G14480 Glycine max GLYMA07G14480 N 0.789
PRUPE_ppa016603mg Prunus persica PRUPE_ppa016603mg N 0.786
Pm019530 Prunus mume Pm019530 N 0.786
Pm031387 Prunus mume Pm031387 N 0.786
Solyc10g019260.1 Solanum lycopersicum Solyc10g019260.1 N 0.782
cassava17368.m1 Manihot esculenta cassava17368.m1 N 0.777
Traes_2DL_912473A86 Triticum aestivum Traes_2DL_912473A86 N 0.774
GRMZM2G046443 Zea mays GRMZM2G046443 N 0.773
Sb07g027160 Sorghum bicolor Sb07g027160 N 0.773
Si015815m.g Setaria italica Si015815m.g N 0.773
Pavir.Fa00479 Panicum virgatum Pavir.Fa00479 N 0.773
BRADI5G17600 Brachypodium distachyon BRADI5G17600 N 0.772
Sb06g024510 Sorghum bicolor Sb06g024510 N 0.768
Ca_19557 Cicer arietinum Ca_19557 N 0.760
GRMZM2G311059 Zea mays GRMZM2G311059 N 0.758
Aquca_081_00025 Aquilegia coerulea Aquca_081_00025 N 0.758
GLYMA09G00371 Glycine max GLYMA09G00371 N 0.754
GLYMA12G37026 Glycine max GLYMA12G37026 N 0.751
Bostr.13158s0046 Boechera stricta Bostr.13158s0046 N 0.746
Aquca_002_00029 Aquilegia coerulea Aquca_002_00029 N 0.745
Cla010897 Citrullus lanatus Cla010897 N 0.743
Ca_18954 Cicer arietinum Ca_18954 N 0.741
TCM_014872 Theobroma cacao TCM_014872 N 0.738
Cucsa.094180 Cucumis sativus Cucsa.094180 N 0.719
Lus10009780.g Linum usitatissimum Lus10009780.g N 0.711
AMTR_s00111p00072510 Amborella trichopoda AMTR_s00111p00072510 N 0.706
mgf004314m Mimulus guttatus mgf004314m N 0.702
GSMUA_Achr1G01660_001 Musa acuminata GSMUA_Achr1G01660_001 N 0.685
LPERR04G16870 Leersia perrieri LPERR04G16870 N 0.674
OLONG_013759 Oryza longistaminata OLONG_013759 N 0.670
Gorai.003G112700 Gossypium raimondii Gorai.003G112700 N 0.664