CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla010897
(
Citrullus lanatus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Cla010897
T283215_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla010897
Myb
11
58
KGPWTAEEDEVLIDYVNKFGPRDWSSLRSKGLLPRTGKSCRLRWVNRL
Cla010897
Myb
65
110
GCKFSADEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSTRR
Links
Other
Myb/SANT
family TFs
Other
Citrullus lanatus
TFs
83 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30174.m008784
Ricinus communis
30174.m008784
N
0.776
AMTR_s00111p00072510
Amborella trichopoda
AMTR_s00111p00072510
N
0.687
Aquca_002_00029
Aquilegia coerulea
Aquca_002_00029
N
0.775
Aquca_081_00025
Aquilegia coerulea
Aquca_081_00025
N
0.760
DUO1
Arabidopsis thaliana
AT3G60460
N
0.709
BGIOSGA016880
Oryza indica
BGIOSGA016880
N
0.771
Bo6g077030
Brassica oleracea
Bo6g077030
N
0.700
Bo8g095200
Brassica oleracea
Bo8g095200
N
0.730
Bostr.13158s0042
Boechera stricta
Bostr.13158s0042
N
0.709
Bra003413
Brassica rapa
Bra003413
N
0.709
Bra007536
Brassica rapa
Bra007536
N
0.730
BRADI5G17600
Brachypodium distachyon
BRADI5G17600
N
0.747
Cagra.3527s0008
Capsella grandiflora
Cagra.3527s0008
N
0.733
Carubv10019483m.g
Capsella rubella
Carubv10019483m.g
N
0.733
cassava17368.m1
Manihot esculenta
cassava17368.m1
N
0.728
cassava19913.m1
Manihot esculenta
cassava19913.m1
N
0.701
Ca_18954
Cicer arietinum
Ca_18954
N
0.681
Ca_19557
Cicer arietinum
Ca_19557
N
0.742
Ciclev10021345m.g
Citrus clementina
Ciclev10021345m.g
N
0.752
Cla006831
Citrullus lanatus
Cla006831
N
0.743
Cucsa.094180
Cucumis sativus
Cucsa.094180
N
0.884
Cucsa.121070
Cucumis sativus
Cucsa.121070
N
0.709
Eucgr.E01581
Eucalyptus grandis
Eucgr.E01581
N
0.764
evm.TU.supercontig_37.96
Carica papaya
evm.TU.supercontig_37.96
N
0.793
DUO1
Arabidopsis lyrata
fgenesh2_kg.5__2511__AT3G60460.1
N
0.709
gene04800-v1.0-hybrid
Fragaria vesca
gene04800-v1.0-hybrid
N
0.764
gene12261-v1.0-hybrid
Fragaria vesca
gene12261-v1.0-hybrid
N
0.747
GLYMA03G26830
Glycine max
GLYMA03G26830
N
0.746
GLYMA07G14480
Glycine max
GLYMA07G14480
N
0.737
GLYMA09G00371
Glycine max
GLYMA09G00371
N
0.716
GLYMA12G37026
Glycine max
GLYMA12G37026
N
0.708
Gorai.003G112700
Gossypium raimondii
Gorai.003G112700
N
0.673
Gorai.004G165400
Gossypium raimondii
Gorai.004G165400
N
0.745
GRMZM2G046443
Zea mays
GRMZM2G046443
N
0.714
GRMZM2G105137
Zea mays
GRMZM2G105137
N
0.751
GRMZM2G311059
Zea mays
GRMZM2G311059
N
0.746
GSMUA_Achr1G01660_001
Musa acuminata
GSMUA_Achr1G01660_001
N
0.710
LjT36B17.50.nd
Lotus japonicus
LjT36B17.50.nd
N
0.739
Lus10009780.g
Linum usitatissimum
Lus10009780.g
N
0.665
MDP0000237596
Malus domestica
MDP0000237596
N
0.773
MDP0000319634
Malus domestica
MDP0000319634
N
0.773
mgf004314m
Mimulus guttatus
mgf004314m
N
0.730
mgf019330m
Mimulus guttatus
mgf019330m
N
0.752
MTR_4g029540
Medicago truncatula
MTR_4g029540
N
0.791
MTR_8g006470
Medicago truncatula
MTR_8g006470
N
0.727
OB04G27810
Oryza brachyantha
OB04G27810
N
0.771
OBART04G20790
Oryza barthii
OBART04G20790
N
0.771
OGLUM04G20730
Oryza glumaepatula
OGLUM04G20730
N
0.771
OMERI04G17240
Oryza meridionalis
OMERI04G17240
N
0.771
ONIVA04G19030
Oryza nivara
ONIVA04G19030
N
0.771
OPUNC04G18480
Oryza punctata
OPUNC04G18480
N
0.771
orange1.1g038795m.g
Citrus sinensis
orange1.1g038795m.g
N
0.752
ORGLA04G0178400
Oryza glaberrima
ORGLA04G0178400
N
0.771
ORUFI04G22380
Oryza rufipogon
ORUFI04G22380
N
0.771
Pavir.Fa00479
Panicum virgatum
Pavir.Fa00479
N
0.731
Pavir.Fb01900
Panicum virgatum
Pavir.Fb01900
N
0.761
Pavir.Gb01130
Panicum virgatum
Pavir.Gb01130
N
0.767
Pavir.J30013
Panicum virgatum
Pavir.J30013
N
0.759
Pavir.J35399
Panicum virgatum
Pavir.J35399
N
0.759
PGSC0003DMG400025720
Solanum tuberosum
PGSC0003DMG400025720
N
0.734
Pm017596
Prunus mume
Pm017596
N
0.773
Pm019530
Prunus mume
Pm019530
N
0.797
Pm031387
Prunus mume
Pm031387
N
0.797
POPTR_0002s14180
Populus trichocarpa
POPTR_0002s14180
N
0.763
POPTR_0014s05370
Populus trichocarpa
POPTR_0014s05370
N
0.738
POPTR_0014s05420
Populus trichocarpa
POPTR_0014s05420
N
0.738
PRUPE_ppa016603mg
Prunus persica
PRUPE_ppa016603mg
N
0.797
PRUPE_ppa020326mg
Prunus persica
PRUPE_ppa020326mg
N
0.749
SapurV1A.0033s0200
Salix purpurea
SapurV1A.0033s0200
N
0.760
SapurV1A.0490s0170
Salix purpurea
SapurV1A.0490s0170
N
0.746
Sb06g024510
Sorghum bicolor
Sb06g024510
N
0.746
Sb07g027160
Sorghum bicolor
Sb07g027160
N
0.731
Si012032m.g
Setaria italica
Si012032m.g
N
0.767
Si015815m.g
Setaria italica
Si015815m.g
N
0.728
Solyc01g090530.1
Solanum lycopersicum
Solyc01g090530.1
N
0.738
Solyc10g019260.1
Solanum lycopersicum
Solyc10g019260.1
N
0.719
TCM_005653
Theobroma cacao
TCM_005653
N
0.793
TCM_014872
Theobroma cacao
TCM_014872
N
0.762
Thhalv10006475m.g
Eutrema salsugineum
Thhalv10006475m.g
N
0.709
Traes_2AL_0A21FB42C
Triticum aestivum
Traes_2AL_0A21FB42C
N
0.764
Traes_2BL_855A1170C
Triticum aestivum
Traes_2BL_855A1170C
N
0.764
Traes_2DL_912473A86
Triticum aestivum
Traes_2DL_912473A86
N
0.738
DUO1
Vitis vinifera
VIT_15s0021g02040
N
0.752