Cmyd_10020453 (Chelonia mydas)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cmyd_10020453 T283357_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CDC5L
M11049_2.00
Homo sapiens
GWKTTAAYRTAD

HTAYRTTAAMWC
Transfac
Matys et al.(2006)
V$CDC5_01
0.863 1.000
CDC5
M02698_2.00
Arabidopsis thaliana
NVCGCTGAGBN

NVCTCAGCGBN
SELEX
Mathelier et al.(2014)
MA0579.1
0.768 0.869
CDC5
M11037_2.00
Arabidopsis thaliana
NVCGCTGAGBN

NVCTCAGCGBN
Transfac
Matys et al.(2006)
P$CDC5_01
0.768 0.869
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10020453 Myb 2 40
Cmyd_10020453 Myb 46 90

Links

Other Myb/SANT family TFs
Other Chelonia mydas TFs

508 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
XP_002154895.1 Hydra magnipapillata XP_002154895.1 N
XP_002155343.1 Hydra magnipapillata XP_002155343.1 N