CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pm019530
(
Prunus mume
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Pm019530
T283574_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm019530
Myb
10
57
KGPWTAEEDEVLISHVKKCGPRDWSSIRSKGLLPRTGKSCRLRWVNKL
Pm019530
Myb
64
109
GSKFSAEEERMVIQLQAQFGNKWAKIATYLPGRTDNDVKNFWSTRR
Links
Other
Myb/SANT
family TFs
Other
Prunus mume
TFs
88 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa016603mg
Prunus persica
PRUPE_ppa016603mg
N
0.909
Pm031387
Prunus mume
Pm031387
N
0.909
TCM_005653
Theobroma cacao
TCM_005653
N
0.856
evm.TU.supercontig_37.96
Carica papaya
evm.TU.supercontig_37.96
N
0.856
DUO1
Vitis vinifera
VIT_15s0021g02040
N
0.839
30174.m008784
Ricinus communis
30174.m008784
N
0.839
mgf019330m
Mimulus guttatus
mgf019330m
N
0.839
Ciclev10021345m.g
Citrus clementina
Ciclev10021345m.g
N
0.839
orange1.1g038795m.g
Citrus sinensis
orange1.1g038795m.g
N
0.839
PRUPE_ppa020326mg
Prunus persica
PRUPE_ppa020326mg
N
0.836
Pm017596
Prunus mume
Pm017596
N
0.836
MDP0000237596
Malus domestica
MDP0000237596
N
0.836
MDP0000319634
Malus domestica
MDP0000319634
N
0.836
Si012032m.g
Setaria italica
Si012032m.g
N
0.829
Pavir.Gb01130
Panicum virgatum
Pavir.Gb01130
N
0.829
Eucgr.E01581
Eucalyptus grandis
Eucgr.E01581
N
0.827
POPTR_0002s14180
Populus trichocarpa
POPTR_0002s14180
N
0.826
Solyc01g090530.1
Solanum lycopersicum
Solyc01g090530.1
N
0.825
Pavir.Fb01900
Panicum virgatum
Pavir.Fb01900
N
0.824
SapurV1A.0033s0200
Salix purpurea
SapurV1A.0033s0200
N
0.823
PGSC0003DMG400025720
Solanum tuberosum
PGSC0003DMG400025720
N
0.822
Pavir.J30013
Panicum virgatum
Pavir.J30013
N
0.822
Pavir.J35399
Panicum virgatum
Pavir.J35399
N
0.822
Cucsa.121070
Cucumis sativus
Cucsa.121070
N
0.821
Bo8g095200
Brassica oleracea
Bo8g095200
N
0.817
Bra007536
Brassica rapa
Bra007536
N
0.817
MTR_4g029540
Medicago truncatula
MTR_4g029540
N
0.815
MTR_8g006470
Medicago truncatula
MTR_8g006470
N
0.815
BGIOSGA016880
Oryza indica
BGIOSGA016880
N
0.814
GRMZM2G105137
Zea mays
GRMZM2G105137
N
0.814
OB04G27810
Oryza brachyantha
OB04G27810
N
0.814
OBART04G20790
Oryza barthii
OBART04G20790
N
0.814
OGLUM04G20730
Oryza glumaepatula
OGLUM04G20730
N
0.814
OMERI04G17240
Oryza meridionalis
OMERI04G17240
N
0.814
ONIVA04G19030
Oryza nivara
ONIVA04G19030
N
0.814
OPUNC04G18480
Oryza punctata
OPUNC04G18480
N
0.814
ORGLA04G0178400
Oryza glaberrima
ORGLA04G0178400
N
0.814
ORUFI04G22380
Oryza rufipogon
ORUFI04G22380
N
0.814
SapurV1A.0490s0170
Salix purpurea
SapurV1A.0490s0170
N
0.809
GLYMA03G26830
Glycine max
GLYMA03G26830
N
0.808
Gorai.004G165400
Gossypium raimondii
Gorai.004G165400
N
0.808
Traes_2AL_0A21FB42C
Triticum aestivum
Traes_2AL_0A21FB42C
N
0.807
Traes_2BL_855A1170C
Triticum aestivum
Traes_2BL_855A1170C
N
0.807
gene04800-v1.0-hybrid
Fragaria vesca
gene04800-v1.0-hybrid
N
0.807
LjT36B17.50.nd
Lotus japonicus
LjT36B17.50.nd
N
0.802
POPTR_0014s05370
Populus trichocarpa
POPTR_0014s05370
N
0.801
POPTR_0014s05420
Populus trichocarpa
POPTR_0014s05420
N
0.801
GLYMA07G14480
Glycine max
GLYMA07G14480
N
0.800
Cla010897
Citrullus lanatus
Cla010897
N
0.797
DUO1
Arabidopsis thaliana
AT3G60460
N
0.796
Bra003413
Brassica rapa
Bra003413
N
0.796
DUO1
Arabidopsis lyrata
fgenesh2_kg.5__2511__AT3G60460.1
N
0.796
Bostr.13158s0042
Boechera stricta
Bostr.13158s0042
N
0.796
Cagra.3527s0008
Capsella grandiflora
Cagra.3527s0008
N
0.796
Carubv10019483m.g
Capsella rubella
Carubv10019483m.g
N
0.796
Thhalv10006475m.g
Eutrema salsugineum
Thhalv10006475m.g
N
0.796
Pavir.Fa00479
Panicum virgatum
Pavir.Fa00479
N
0.793
cassava17368.m1
Manihot esculenta
cassava17368.m1
N
0.791
BRADI5G17600
Brachypodium distachyon
BRADI5G17600
N
0.790
Si015815m.g
Setaria italica
Si015815m.g
N
0.790
gene12261-v1.0-hybrid
Fragaria vesca
gene12261-v1.0-hybrid
N
0.790
Bo6g077030
Brassica oleracea
Bo6g077030
N
0.787
GRMZM2G311059
Zea mays
GRMZM2G311059
N
0.786
Sb06g024510
Sorghum bicolor
Sb06g024510
N
0.786
Solyc10g019260.1
Solanum lycopersicum
Solyc10g019260.1
N
0.786
Cla006831
Citrullus lanatus
Cla006831
N
0.786
GLYMA09G00371
Glycine max
GLYMA09G00371
N
0.784
Traes_2DL_912473A86
Triticum aestivum
Traes_2DL_912473A86
N
0.781
Aquca_002_00029
Aquilegia coerulea
Aquca_002_00029
N
0.776
GLYMA12G37026
Glycine max
GLYMA12G37026
N
0.775
Sb07g027160
Sorghum bicolor
Sb07g027160
N
0.774
TCM_014872
Theobroma cacao
TCM_014872
N
0.773
Cucsa.094180
Cucumis sativus
Cucsa.094180
N
0.773
Ca_18954
Cicer arietinum
Ca_18954
N
0.768
Ca_19557
Cicer arietinum
Ca_19557
N
0.765
cassava19913.m1
Manihot esculenta
cassava19913.m1
N
0.764
Aquca_081_00025
Aquilegia coerulea
Aquca_081_00025
N
0.760
GRMZM2G046443
Zea mays
GRMZM2G046443
N
0.757
GSMUA_Achr1G01660_001
Musa acuminata
GSMUA_Achr1G01660_001
N
0.754
Lus10009780.g
Linum usitatissimum
Lus10009780.g
N
0.732
AMTR_s00111p00072510
Amborella trichopoda
AMTR_s00111p00072510
N
0.731
Bostr.13158s0046
Boechera stricta
Bostr.13158s0046
N
0.727
mgf004314m
Mimulus guttatus
mgf004314m
N
0.712
SELMODRAFT_116971
Selaginella moellendorffii
SELMODRAFT_116971
N
0.685
SELMODRAFT_118852
Selaginella moellendorffii
SELMODRAFT_118852
N
0.685
Gorai.003G112700
Gossypium raimondii
Gorai.003G112700
N
0.684
LPERR04G16870
Leersia perrieri
LPERR04G16870
N
0.682
OB08G27600
Oryza brachyantha
OB08G27600
N
0.677