Pm019588 (Prunus mume)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pm019588 T283576_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.794 0.817
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.794 0.817
MYB106
M11040_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G01140_01 		0.787 0.774
MYB92
M07123_2.00 		Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN		 Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b 		0.786 0.828
MYB92
M07124_2.00 		Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN		 Dap-seq
OMalley et al.(2016)
MYB92_colamp_a 		0.786 0.828
AtMYB93
M07020_2.00 		Arabidopsis thaliana
HDNYYYAMCWAMYHHHHHHHH
DDDDDDDDRKTWGKTRRRNHD		 Dap-seq
OMalley et al.(2016)
MYB93_col_a 		0.749 0.817
AtMYB93
M07021_2.00 		Arabidopsis thaliana
NNHNBYYYAMCWAMY
RKTWGKTRRRVNDNN		 Dap-seq
OMalley et al.(2016)
MYB93_colamp_a 		0.749 0.817
MYB49
M07140_2.00 		Arabidopsis thaliana
HDBBYYACCWAMYWH
DWRKTWGGTRRVVHD		 Dap-seq
OMalley et al.(2016)
MYB49_col_a 		0.705 0.785
MYB49
M07141_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHN
NDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB49_colamp_a 		0.705 0.785
AtMYB17
M07099_2.00 		Arabidopsis thaliana
YYYACCWACCWHHHH
DDDDWGGTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB17_colamp_a 		0.698 0.763
MYB39
M07106_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_col_a 		0.693 0.753
MYB39
M07107_2.00 		Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH
DNDDDDDDDWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_colamp_a 		0.693 0.753
ATMYB13
M06999_2.00 		Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD		 Dap-seq
OMalley et al.(2016)
MYB13_col_a 		0.693 0.731
ATMYB13
M07000_2.00 		Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV		 Dap-seq
OMalley et al.(2016)
MYB13_colamp_a 		0.693 0.731
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.666 0.774
AtMYB74
M07104_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB74_colamp_a 		0.663 0.763
AtMYB74
M07105_2.00 		Arabidopsis thaliana
BYHYACCTAMYHHH
DDDRKTAGGTRDRV		 Dap-seq
OMalley et al.(2016)
MYB74_col 		0.663 0.763
AtMYB10
M07081_2.00 		Arabidopsis thaliana
YYYACCWAMCHHHHNH
DNDDDDGKTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB10_col_a 		0.663 0.710
AtMYB10
M07082_2.00 		Arabidopsis thaliana
NYYYACCWAMCHHH
DDDGKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB10_colamp_a 		0.663 0.710
MYB55
M00876_2.00 		Arabidopsis thaliana
ACCWAMCD
HGKTWGGT		 PBM
Franco-Zorrilla et al.(2014)
MYB55 		0.662 0.710
MYB55
M07102_2.00 		Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND		 Dap-seq
OMalley et al.(2016)
MYB55_colamp_a 		0.662 0.710
MYB55
M07103_2.00 		Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN		 Dap-seq
OMalley et al.(2016)
MYB55_col 		0.662 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm019588 Myb 19 66
Pm019588 Myb 72 117

Links

Other Myb/SANT family TFs
Other Prunus mume TFs

894 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL013653 Aedes aegypti AAEL013653 N
AALB008022 Anopheles albimanus AALB008022 N
AARA002613 Anopheles arabiensis AARA002613 N
AARA008085 Anopheles arabiensis AARA008085 N
AATE004417 Anopheles atroparvus AATE004417 N
ACHR000830 Anopheles christyi ACHR000830 N
ACHR003814 Anopheles christyi ACHR003814 N
ACOM025760 Anopheles coluzzii ACOM025760 N
ACOM038702 Anopheles coluzzii ACOM038702 N
ACUA017562 Anopheles culicifacies ACUA017562 N
ACUA022967 Anopheles culicifacies ACUA022967 N
ADAC005282 Anopheles darlingi ADAC005282 N
ADIR001353 Anopheles dirus ADIR001353 N
ADIR007200 Anopheles dirus ADIR007200 N
AEPI005949 Anopheles epiroticus AEPI005949 N
AEPI009152 Anopheles epiroticus AEPI009152 N
AFAF018377 Anopheles farauti AFAF018377 N
AFAF013567 Anopheles farauti AFAF013567 N
AFUN003868 Anopheles funestus AFUN003868 N
AFUN001038 Anopheles funestus AFUN001038 N
AGAP000336 Anopheles gambiae AGAP000336 N
AGAP007517 Anopheles gambiae AGAP007517 N
AMAM019785 Anopheles maculatus AMAM019785 N
AMEC017669 Anopheles melas AMEC017669 N
AMEC000435 Anopheles melas AMEC000435 N
AMEM015155 Anopheles merus AMEM015155 N
AMIN005487 Anopheles minimus AMIN005487 N
AMIN010411 Anopheles minimus AMIN010411 N
AQUA007272 Anopheles quadriannulatus AQUA007272 N
AQUA004406 Anopheles quadriannulatus AQUA004406 N
ASIS017447 Anopheles sinensis ASIS017447 N
ASTEI08810 Anopheles stephensi ASTEI08810 N
GB45421 Apis mellifera GB45421 N
ACEP26919 Atta cephalotes ACEP26919 N
BGIBMGA003121 Bombyx mori BGIBMGA003121 N
Cflo_02113--XP_396371.3_APIME Camponotus floridanus Cflo_02113--XP_396371.3_APIME N
CGI_10021242 Crassostrea gigas CGI_10021242 N
CpipJ_CPIJ003789 Culex pipiens CpipJ_CPIJ003789 N
CPIJ003789 Culex quinquefasciatus CPIJ003789 N
KGM_18877 Danaus plexippus KGM_18877 N
DAPPUDRAFT_304868 Daphnia pulex DAPPUDRAFT_304868 N
YQE_07182 Dendroctonus ponderosae YQE_07182 N
GF21727 Drosophila ananassae FBgn0098727 N
GG18249 Drosophila erecta FBgn0110465 N
GH10255 Drosophila grimshawi FBgn0117736 N
GH11849 Drosophila grimshawi FBgn0119328 N
Trf2 Drosophila melanogaster FBgn0261793 N
GI15474 Drosophila mojavensis FBgn0138223 N
GI14331 Drosophila mojavensis FBgn0137084 N
GL16412 Drosophila persimilis FBgn0154016 N
GA14764 Drosophila pseudoobscura FBgn0074791 N
GM21561 Drosophila sechellia FBgn0176441 N
GJ19385 Drosophila virilis FBgn0206528 N
GJ17285 Drosophila virilis FBgn0204460 N
GK16294 Drosophila willistoni FBgn0218296 N
GE15780 Drosophila yakuba FBgn0233345 N
HHAL006636-PA Halyomorpha halys HHAL006636-PA N
Hsal_05746--XP_396371.3_APIME Harpegnathos saltator Hsal_05746--XP_396371.3_APIME N
HMEL012402 Heliconius melpomene HMEL012402 N
ISCW018321 Ixodes scapularis ISCW018321 N
LDEC018353 Leptinotarsa decemlineata LDEC018353 N
LCUP013707 Lucilia cuprina LCUP013707 N
LLOJ009650 Lutzomyia longipalpis LLOJ009650 N
MCINX007554 Melitaea cinxia MCINX007554 N
MDOA002006 Musca domestica MDOA002006 N
NV17354 Nasonia vitripennis NV17354 N
PHUM375280 Pediculus humanus PHUM375280 N
PPAI002384 Phlebotomus papatasi PPAI002384 N
RPRC008747 Rhodnius prolixus RPRC008747 N
SINV24562 Solenopsis invicta SINV24562 N
SMAR014284 Strigamia maritima SMAR014284 N
TC014666 Tribolium castaneum TC014666 N
L798_06110 Zootermopsis nevadensis L798_06110 N