CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm029444
(
Prunus mume
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Pm029444
T283653_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm029444
Myb
196
243
KGAWTREEDDLLRQCIENQGEGKWHQVPYKARLNRCRKSCKLRWLNYL
Pm029444
Myb
249
294
RGEFAEDEVDLIIRLHKLLGNRGRGVLGMLGLDGLRGRRTKIRDWN
Links
Other
Myb/SANT
family TFs
Other
Prunus mume
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm029437
Prunus mume
Pm029437
N
0.769
MDP0000317257
Malus domestica
MDP0000317257
N
0.741
mgf022083m
Mimulus guttatus
mgf022083m
N
0.738
MDP0000127691
Malus domestica
MDP0000127691
N
0.725
MYB114
Arabidopsis thaliana
AT1G66380
I
0.704
PGSC0003DMG400013965
Solanum tuberosum
PGSC0003DMG400013965
N
0.693
PGSC0003DMG400013966
Solanum tuberosum
PGSC0003DMG400013966
N
0.693
Lus10006541.g
Linum usitatissimum
Lus10006541.g
N
0.692
gene26513-v1.0-hybrid
Fragaria vesca
gene26513-v1.0-hybrid
N
0.687
Cagra.0463s0005
Capsella grandiflora
Cagra.0463s0005
N
0.682
VIT_02s0033g00370
Vitis vinifera
VIT_02s0033g00370
N
0.676
Eucgr.F02845
Eucalyptus grandis
Eucgr.F02845
N
0.671
Eucgr.F02843
Eucalyptus grandis
Eucgr.F02843
N
0.669