29680.m001686 (Ricinus communis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 29680.m001686 T283764_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
29680.m001686 Myb 14 61
29680.m001686 Myb 67 93

Links

Other Myb/SANT family TFs
Other Ricinus communis TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ciclev10022991m.g Citrus clementina Ciclev10022991m.g N 0.765
BGIOSGA014710 Oryza indica BGIOSGA014710 N 0.765
VIT_14s0036g00460 Vitis vinifera VIT_14s0036g00460 N 0.759
PRUPE_ppa018086mg Prunus persica PRUPE_ppa018086mg N 0.742
chr1.CM0600.130.nd Lotus japonicus chr1.CM0600.130.nd N 0.721
Ca_23163 Cicer arietinum Ca_23163 N 0.715
F775_24174 Aegilops tauschii F775_24174 N 0.695
Carubv10010717m.g Capsella rubella Carubv10010717m.g N 0.693
30005.m001298 Ricinus communis 30005.m001298 N 0.692
MLOC_53640 Hordeum vulgare MLOC_53640 I 0.686
AMTR_s00009p00257990 Amborella trichopoda AMTR_s00009p00257990 N 0.683
orange1.1g048610m.g Citrus sinensis orange1.1g048610m.g N 0.675
Pavir.Ib03254 Panicum virgatum Pavir.Ib03254 N 0.674
OS08G0433400 Oryza sativa OS08G0433400 N 0.669
cassava22106.m1 Manihot esculenta cassava22106.m1 N 0.668
GLYMA10G04250 Glycine max GLYMA10G04250 N 0.665
evm.TU.supercontig_1993.2 Carica papaya evm.TU.supercontig_1993.2 N 0.665
Pavir.Ga01179 Panicum virgatum Pavir.Ga01179 N 0.661