CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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29739.m003784
(
Ricinus communis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
29739.m003784
T283782_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.664
0.753
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29739.m003784
Myb
13
60
RGPWSPEEDEILTNYIKHYGVGKWTSVSRRAGLKRCAKSCRLRWLNYL
29739.m003784
Myb
66
111
RGNISEDEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSNL
Links
Other
Myb/SANT
family TFs
Other
Ricinus communis
TFs
135 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava36365.valid.m1
Manihot esculenta
cassava36365.valid.m1
I
0.749
GSMUA_Achr8G22690_001
Musa acuminata
GSMUA_Achr8G22690_001
I
0.729
Si038905m.g
Setaria italica
Si038905m.g
I
0.729
VIT_11s0016g01310
Vitis vinifera
VIT_11s0016g01310
I
0.729
Lus10000470.g
Linum usitatissimum
Lus10000470.g
I
0.729
GLYMA20G32500
Glycine max
GLYMA20G32500
I
0.727
TCM_010778
Theobroma cacao
TCM_010778
I
0.724
GSMUA_Achr3G07940_001
Musa acuminata
GSMUA_Achr3G07940_001
I
0.721
PDK_20s1554342g001
Phoenix dactylifera
PDK_20s1554342g001
I
0.721
PDK_20s1716541g001
Phoenix dactylifera
PDK_20s1716541g001
I
0.720
ORGLA03G0196700
Oryza glaberrima
ORGLA03G0196700
I
0.718
GSMUA_Achr9G16040_001
Musa acuminata
GSMUA_Achr9G16040_001
I
0.716
TCM_037379
Theobroma cacao
TCM_037379
I
0.716
AMTR_s00024p00224180
Amborella trichopoda
AMTR_s00024p00224180
I
0.715
MTR_4g125520
Medicago truncatula
MTR_4g125520
I
0.715
evm.TU.supercontig_126.33
Carica papaya
evm.TU.supercontig_126.33
I
0.713
Sb01g032770
Sorghum bicolor
Sb01g032770
I
0.712
TCM_037559
Theobroma cacao
TCM_037559
I
0.712
Aquca_076_00099
Aquilegia coerulea
Aquca_076_00099
I
0.712
TCM_004509
Theobroma cacao
TCM_004509
I
0.711
TCM_037376
Theobroma cacao
TCM_037376
I
0.711
VIT_04s0008g01800
Vitis vinifera
VIT_04s0008g01800
I
0.711
Eucgr.C00721
Eucalyptus grandis
Eucgr.C00721
I
0.711
Eucgr.C03555
Eucalyptus grandis
Eucgr.C03555
I
0.710
Ca_03154
Cicer arietinum
Ca_03154
I
0.709
AMTR_s00024p00224850
Amborella trichopoda
AMTR_s00024p00224850
I
0.708
GSMUA_Achr6G04400_001
Musa acuminata
GSMUA_Achr6G04400_001
I
0.708
POPTR_0006s23840
Populus trichocarpa
POPTR_0006s23840
I
0.708
PRUPE_ppa022205mg
Prunus persica
PRUPE_ppa022205mg
I
0.708
Solyc12g049300.1
Solanum lycopersicum
Solyc12g049300.1
I
0.708
Pm005570
Prunus mume
Pm005570
I
0.708
cassava7672.valid.m1
Manihot esculenta
cassava7672.valid.m1
I
0.708
Eucgr.C00722
Eucalyptus grandis
Eucgr.C00722
I
0.708
MDP0000031172
Malus domestica
MDP0000031172
I
0.708
SapurV1A.0710s0070
Salix purpurea
SapurV1A.0710s0070
I
0.708
Eucgr.C00724
Eucalyptus grandis
Eucgr.C00724
I
0.706
MDP0000210851
Malus domestica
MDP0000210851
I
0.705
gene15390-v1.0-hybrid
Fragaria vesca
gene15390-v1.0-hybrid
I
0.703
TT2
Arabidopsis thaliana
AT5G35550
I
0.702
Bo8g030520
Brassica oleracea
Bo8g030520
I
0.702
Bra035532
Brassica rapa
Bra035532
I
0.702
TT2
Arabidopsis lyrata
fgenesh2_kg.7__3049__AT5G35550.1
I
0.702
Bostr.29044s0068
Boechera stricta
Bostr.29044s0068
I
0.702
Cagra.5428s0005
Capsella grandiflora
Cagra.5428s0005
I
0.702
Carubv10006684m.g
Capsella rubella
Carubv10006684m.g
I
0.702
Thhalv10003461m.g
Eutrema salsugineum
Thhalv10003461m.g
I
0.702
AMTR_s00024p00224470
Amborella trichopoda
AMTR_s00024p00224470
I
0.701
PRUPE_ppa010252mg
Prunus persica
PRUPE_ppa010252mg
I
0.701
VIT_04s0008g01820
Vitis vinifera
VIT_04s0008g01820
I
0.701
VIT_11s0016g01320
Vitis vinifera
VIT_11s0016g01320
I
0.701
Eucgr.C00723
Eucalyptus grandis
Eucgr.C00723
I
0.701
PK16315.1
Cannabis sativa
PK16315.1
I
0.701
GSMUA_Achr10G17610_001
Musa acuminata
GSMUA_Achr10G17610_001
I
0.700
cassava28702.m1
Manihot esculenta
cassava28702.m1
I
0.700
Eucgr.J02819
Eucalyptus grandis
Eucgr.J02819
N
0.700
Gorai.001G020600
Gossypium raimondii
Gorai.001G020600
I
0.700
cassava36364.valid.m1
Manihot esculenta
cassava36364.valid.m1
I
0.699
Gorai.004G044000
Gossypium raimondii
Gorai.004G044000
I
0.699
GLYMA10G35061
Glycine max
GLYMA10G35061
I
0.698
Pm005571
Prunus mume
Pm005571
I
0.698
Pm013279
Prunus mume
Pm013279
I
0.698
Pavir.Db02046
Panicum virgatum
Pavir.Db02046
I
0.697
TCM_000535
Theobroma cacao
TCM_000535
I
0.696
VIT_09s0002g01400
Vitis vinifera
VIT_09s0002g01400
I
0.695
GLYMA07G04240
Glycine max
GLYMA07G04240
I
0.694
GLYMA16G00931
Glycine max
GLYMA16G00931
I
0.694
OB03G30160
Oryza brachyantha
OB03G30160
I
0.693
Gorai.001G015200
Gossypium raimondii
Gorai.001G015200
I
0.692
LjT02E24.110.nc
Lotus japonicus
LjT02E24.110.nc
I
0.692
LjT02E24.60.nc
Lotus japonicus
LjT02E24.60.nc
I
0.692
PRUPE_ppa023789mg
Prunus persica
PRUPE_ppa023789mg
I
0.691
gene15389-v1.0-hybrid
Fragaria vesca
gene15389-v1.0-hybrid
I
0.691
TCM_037377
Theobroma cacao
TCM_037377
I
0.689
28226.m000839
Ricinus communis
28226.m000839
I
0.689
cassava2758.m1
Manihot esculenta
cassava2758.m1
I
0.689
LjSGA_029658.1
Lotus japonicus
LjSGA_029658.1
I
0.689
OB06G16110
Oryza brachyantha
OB06G16110
I
0.688
ORGLA06G0059500
Oryza glaberrima
ORGLA06G0059500
I
0.688
ORUFI06G06900
Oryza rufipogon
ORUFI06G06900
I
0.688
LjT02E24.130.nc
Lotus japonicus
LjT02E24.130.nc
I
0.688
PRUPE_ppa023812mg
Prunus persica
PRUPE_ppa023812mg
I
0.687
gene15386-v1.0-hybrid
Fragaria vesca
gene15386-v1.0-hybrid
I
0.687
gene15392-v1.0-hybrid
Fragaria vesca
gene15392-v1.0-hybrid
I
0.687
VIT_04s0008g01830
Vitis vinifera
VIT_04s0008g01830
N
0.686
Pm027045
Prunus mume
Pm027045
I
0.686
Eucgr.F03176
Eucalyptus grandis
Eucgr.F03176
I
0.686
AMTR_s00024p00225650
Amborella trichopoda
AMTR_s00024p00225650
N
0.685
Eucgr.J02816
Eucalyptus grandis
Eucgr.J02816
I
0.684
Eucgr.J02817
Eucalyptus grandis
Eucgr.J02817
I
0.684
Lus10033438.g
Linum usitatissimum
Lus10033438.g
I
0.684
PRUPE_ppa023768mg
Prunus persica
PRUPE_ppa023768mg
I
0.682
Pm005572
Prunus mume
Pm005572
I
0.682
Gorai.001G020400
Gossypium raimondii
Gorai.001G020400
I
0.682
gene07416-v1.0-hybrid
Fragaria vesca
gene07416-v1.0-hybrid
I
0.680
Gorai.001G020500
Gossypium raimondii
Gorai.001G020500
N
0.678
GRMZM2G701063
Zea mays
GRMZM2G701063
I
0.677
Gorai.007G362200
Gossypium raimondii
Gorai.007G362200
I
0.676
MDP0000437717
Malus domestica
MDP0000437717
I
0.676
PDK_20s1918041g001
Phoenix dactylifera
PDK_20s1918041g001
I
0.676
cassava41021.m1
Manihot esculenta
cassava41021.m1
I
0.675
Ca_12762
Cicer arietinum
Ca_12762
N
0.674
GSMUA_Achr9G27380_001
Musa acuminata
GSMUA_Achr9G27380_001
I
0.673
Pm029489
Prunus mume
Pm029489
I
0.671
OGLUM03G21860
Oryza glumaepatula
OGLUM03G21860
I
0.670
POPTR_0013s05310
Populus trichocarpa
POPTR_0013s05310
I
0.670
Ciclev10009286m.g
Citrus clementina
Ciclev10009286m.g
I
0.670
MDP0000184538
Malus domestica
MDP0000184538
I
0.670
SapurV1A.1276s0060
Salix purpurea
SapurV1A.1276s0060
I
0.670
PRUPE_ppa019380mg
Prunus persica
PRUPE_ppa019380mg
I
0.669
Eucgr.C03151
Eucalyptus grandis
Eucgr.C03151
I
0.669
orange1.1g025602m.g
Citrus sinensis
orange1.1g025602m.g
I
0.669
PRUPE_ppa024074mg
Prunus persica
PRUPE_ppa024074mg
I
0.668
Pm027047
Prunus mume
Pm027047
I
0.668
Eucgr.C02096
Eucalyptus grandis
Eucgr.C02096
I
0.668
TCM_037555
Theobroma cacao
TCM_037555
I
0.667
cassava26193.m1
Manihot esculenta
cassava26193.m1
I
0.667
Gorai.010G087200
Gossypium raimondii
Gorai.010G087200
I
0.667
PRUPE_ppa015883mg
Prunus persica
PRUPE_ppa015883mg
I
0.666
VIT_04s0008g01810
Vitis vinifera
VIT_04s0008g01810
I
0.666
Pm005573
Prunus mume
Pm005573
I
0.666
MDP0000318013
Malus domestica
MDP0000318013
I
0.666
VIT_04s0008g01840
Vitis vinifera
VIT_04s0008g01840
I
0.665
GLYMA13G16890
Glycine max
GLYMA13G16890
I
0.664
GLYMA17G05831
Glycine max
GLYMA17G05831
I
0.664
VIT_11s0016g01300
Vitis vinifera
VIT_11s0016g01300
I
0.664
Q2TCH0_PETHY
Petunia x hybrida
Q2TCH0_PETHY
D
0.664
PK23594.1
Cannabis sativa
PK23594.1
I
0.664
PDK_20s1310471g002
Phoenix dactylifera
PDK_20s1310471g002
I
0.664
VIT_13s0084g00530
Vitis vinifera
VIT_13s0084g00530
I
0.663
Eucgr.C03152
Eucalyptus grandis
Eucgr.C03152
N
0.663
Eucgr.C03153
Eucalyptus grandis
Eucgr.C03153
N
0.663
GLYMA10G35050
Glycine max
GLYMA10G35050
I
0.662
Cla011528
Citrullus lanatus
Cla011528
I
0.661
cassava3467.m1
Manihot esculenta
cassava3467.m1
N
0.661
MDP0000650225
Malus domestica
MDP0000650225
I
0.661