CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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29933.m001454
(
Ricinus communis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
29933.m001454
T283842_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29933.m001454
Myb
15
62
KGTWTPDEDQKLITYINRYGIWNWNEMSKAAGLLRSGKSCRLRWVNYL
29933.m001454
Myb
68
113
RGNFSSEEDEIILSLHAMLGNRWSAIAAKFPGRTDNDIKNHWHTHL
Links
Other
Myb/SANT
family TFs
Other
Ricinus communis
TFs
92 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_033015
Theobroma cacao
TCM_033015
N
0.771
POPTR_0011s04010
Populus trichocarpa
POPTR_0011s04010
N
0.767
29933.m001453
Ricinus communis
29933.m001453
N
0.748
TCM_030020
Theobroma cacao
TCM_030020
I
0.746
TCM_033016
Theobroma cacao
TCM_033016
N
0.745
evm.TU.supercontig_27.156
Carica papaya
evm.TU.supercontig_27.156
N
0.743
MDP0000131822
Malus domestica
MDP0000131822
I
0.738
MDP0000289283
Malus domestica
MDP0000289283
I
0.737
POPTR_0011s04020
Populus trichocarpa
POPTR_0011s04020
N
0.736
Pm009880
Prunus mume
Pm009880
N
0.735
Gorai.011G021300
Gossypium raimondii
Gorai.011G021300
N
0.731
Ciclev10017679m.g
Citrus clementina
Ciclev10017679m.g
I
0.730
cassava5261.m1
Manihot esculenta
cassava5261.m1
N
0.729
cassava5263.m1
Manihot esculenta
cassava5263.m1
N
0.728
PRUPE_ppa015081mg
Prunus persica
PRUPE_ppa015081mg
N
0.725
gene30736-v1.0-hybrid
Fragaria vesca
gene30736-v1.0-hybrid
N
0.723
orange1.1g037956m.g
Citrus sinensis
orange1.1g037956m.g
N
0.723
Gorai.013G143000
Gossypium raimondii
Gorai.013G143000
N
0.720
Gorai.013G143100
Gossypium raimondii
Gorai.013G143100
N
0.718
GLYMA12G32541
Glycine max
GLYMA12G32541
N
0.713
VIT_00s0203g00170
Vitis vinifera
VIT_00s0203g00170
N
0.713
Gorai.010G148300
Gossypium raimondii
Gorai.010G148300
N
0.713
Eucgr.H03057
Eucalyptus grandis
Eucgr.H03057
I
0.712
Lus10042561.g
Linum usitatissimum
Lus10042561.g
I
0.711
GSMUA_Achr5G03920_001
Musa acuminata
GSMUA_Achr5G03920_001
I
0.710
Eucgr.H00158
Eucalyptus grandis
Eucgr.H00158
I
0.710
POPTR_0004s02570
Populus trichocarpa
POPTR_0004s02570
I
0.709
Gorai.013G143200
Gossypium raimondii
Gorai.013G143200
I
0.709
SapurV1A.0028s0640
Salix purpurea
SapurV1A.0028s0640
N
0.707
GLYMA06G45554
Glycine max
GLYMA06G45554
I
0.702
POPTR_0011s04000
Populus trichocarpa
POPTR_0011s04000
N
0.700
POPTR_0019s14140
Populus trichocarpa
POPTR_0019s14140
N
0.700
Gorai.012G132400
Gossypium raimondii
Gorai.012G132400
I
0.694
MDP0000155426
Malus domestica
MDP0000155426
I
0.694
MDP0000407613
Malus domestica
MDP0000407613
N
0.694
Eucgr.L02563
Eucalyptus grandis
Eucgr.L02563
N
0.693
Eucgr.D00040
Eucalyptus grandis
Eucgr.D00040
I
0.692
Eucgr.D00042
Eucalyptus grandis
Eucgr.D00042
I
0.692
SapurV1A.0417s0130
Salix purpurea
SapurV1A.0417s0130
I
0.692
TCM_007865
Theobroma cacao
TCM_007865
I
0.691
VIT_12s0134g00480
Vitis vinifera
VIT_12s0134g00480
I
0.691
PRUPE_ppa026553mg
Prunus persica
PRUPE_ppa026553mg
N
0.690
Pm015302
Prunus mume
Pm015302
N
0.690
Eucgr.D00044
Eucalyptus grandis
Eucgr.D00044
N
0.689
PGSC0003DMG401026177
Solanum tuberosum
PGSC0003DMG401026177
I
0.686
Solyc07g053230.2
Solanum lycopersicum
Solyc07g053230.2
I
0.686
GLYMA12G11330
Glycine max
GLYMA12G11330
I
0.684
PGSC0003DMG402026177
Solanum tuberosum
PGSC0003DMG402026177
I
0.681
gene01998-v1.0-hybrid
Fragaria vesca
gene01998-v1.0-hybrid
N
0.681
cassava26894.m1
Manihot esculenta
cassava26894.m1
N
0.680
Ciclev10016303m.g
Citrus clementina
Ciclev10016303m.g
I
0.679
GLYMA12G32530
Glycine max
GLYMA12G32530
I
0.677
PDK_20s1320951g001
Phoenix dactylifera
PDK_20s1320951g001
I
0.677
GLYMA10G32410
Glycine max
GLYMA10G32410
I
0.676
Solyc07g053240.2
Solanum lycopersicum
Solyc07g053240.2
I
0.676
Eucgr.D00050
Eucalyptus grandis
Eucgr.D00050
N
0.676
POPTR_0013s14560
Populus trichocarpa
POPTR_0013s14560
I
0.675
SapurV1A.0048s0160
Salix purpurea
SapurV1A.0048s0160
N
0.675
TCM_020889
Theobroma cacao
TCM_020889
I
0.674
TCM_007868
Theobroma cacao
TCM_007868
I
0.673
Cucsa.053600
Cucumis sativus
Cucsa.053600
I
0.673
PK20358.1
Cannabis sativa
PK20358.1
I
0.673
PK24260.1
Cannabis sativa
PK24260.1
N
0.671
GLYMA02G00820
Glycine max
GLYMA02G00820
I
0.670
GLYMA10G00930
Glycine max
GLYMA10G00930
I
0.670
VIT_12s0134g00490
Vitis vinifera
VIT_12s0134g00490
I
0.670
Lus10039734.g
Linum usitatissimum
Lus10039734.g
I
0.669
Lus10039735.g
Linum usitatissimum
Lus10039735.g
I
0.669
GLYMA06G45547
Glycine max
GLYMA06G45547
N
0.668
VIT_07s0005g03340
Vitis vinifera
VIT_07s0005g03340
I
0.667
cassava47180.m1
Manihot esculenta
cassava47180.m1
I
0.667
chr3.LjT47O18.40.nc
Lotus japonicus
chr3.LjT47O18.40.nc
N
0.667
Solyc07g054980.1
Solanum lycopersicum
Solyc07g054980.1
I
0.666
Gorai.005G206800
Gossypium raimondii
Gorai.005G206800
N
0.665
Gorai.011G173900
Gossypium raimondii
Gorai.011G173900
I
0.665
PGSC0003DMG400017223
Solanum tuberosum
PGSC0003DMG400017223
I
0.664
PGSC0003DMG400026176
Solanum tuberosum
PGSC0003DMG400026176
N
0.664
Solyc09g090130.2
Solanum lycopersicum
Solyc09g090130.2
I
0.664
TCM_004046
Theobroma cacao
TCM_004046
I
0.664
Cla006077
Citrullus lanatus
Cla006077
I
0.664
Ciclev10021699m.g
Citrus clementina
Ciclev10021699m.g
I
0.664
Gorai.001G177100
Gossypium raimondii
Gorai.001G177100
I
0.664
Gorai.007G146200
Gossypium raimondii
Gorai.007G146200
I
0.664
PGSC0003DMG400042926
Solanum tuberosum
PGSC0003DMG400042926
N
0.663
Solyc03g093930.2
Solanum lycopersicum
Solyc03g093930.2
N
0.663
TCM_026197
Theobroma cacao
TCM_026197
I
0.663
Bostr.24513s0107
Boechera stricta
Bostr.24513s0107
I
0.663
Eucgr.D00037
Eucalyptus grandis
Eucgr.D00037
N
0.663
Gorai.002G016800
Gossypium raimondii
Gorai.002G016800
I
0.663
chr3.LjT47O18.70.nc
Lotus japonicus
chr3.LjT47O18.70.nc
N
0.662
GLYMA12G11390
Glycine max
GLYMA12G11390
N
0.661
gene08084-v1.0-hybrid
Fragaria vesca
gene08084-v1.0-hybrid
I
0.661